Pelecanus crispus (Dalmatian pelican): 104037708
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Entry
104037708 CDS
T08340
Symbol
HELZ
Name
(RefSeq) LOW QUALITY PROTEIN: probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcri03019
]
104037708 (HELZ)
Messenger RNA biogenesis [BR:
pcri03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
104037708 (HELZ)
3'-5' decay
Other 3'-5' decay factors
104037708 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
zf-CCCH
AAA_30
AAA_19
UvrD-helicase
ResIII
PhoH
PAM2
zf_CCCH_4
Mov-10_helical
zf-CCCH_4
AAA_22
AAA_16
AAA_5
AAA_7
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
104037708
NCBI-ProteinID:
XP_009490056
LinkDB
All DBs
Position
Unknown
AA seq
1948 aa
AA seq
DB search
MADRRPEESCEQACESLKQQDYEVAVKHCTEALLSLSQYPPAHLPEACQAEIDRIKIETL
LYRIASFLQLKKYGQADEDCRHVLGEGLAKGDGSFRAVLCCMHLKGKLQIVSNVLSKSLM
GESLNGMVTKDLTRLKTLLAETEAAGKVPSGYHVEDLEEGSRDGWQFRPPPRGVTSSEEY
TLCKRFLEQGICRYGAQCTSAHSQEELTEWQKRYASRLIRLKQQKENKQCSGSYMETLIE
KWMNSLSPEKVLSECVEGVRVEHNPELSVTVTTKKSHQTWTFALTCKPARMLYRVALLYD
AHRPHFSIVAISAGDSTTQVSQEVPENCQEWIGGKMVQNGIDHYIYKVSIAFNTEIFGTF
RQTVVFDFGLEPVLMQRVMIDAASTEDLEYLMHARQQLLTTAKRWDSTSKTIVEFEPNET
TELEKSLLTRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKFNIK
VQLQIVASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVTK
EKSAQTQGTKEKVYEAAIEEKTKDYIFLRVSRECCEELNLRADCEMQVELQFQLNRLPLC
EMHYALDRIKDNSILFPDVSMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQL
PPVLIIGPYGTGKTFTLAQAVKHILQQQDTRILICTHSNSAADLYIKDYLHPYVEAGNPQ
ARPLRVYFRNRWVKTVHPVVHQYCLISSTHSTFQMPQKEDILKQRVVVVTLNTSQYLCQL
DLEPGFFTHILLDEAAQAMECETIMPLALANKNTRIVLAGDHMQLSPFVYSEFARERNLH
VSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYPLT
FFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQVF
RIRAELRKKRLSDVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKRKEQLLEDSTE
DLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENESLHGIT
FEQIKAQLEALELKKTYVLNPLAPEFIPRALRHQHSANTTKQQQSPPKGKVHHHNQNDHF
PPDGIVQPNPSVLIGNPIRAYTPPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVYG
GNMVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQAHGRGSPIPYGLGHHSPVS
IGQQQQLQHQDKEQHEQSRNGKSENTAGPEISKIRTPEKKPVESKQVDLEANSQNRSPES
RSSVGYPNAKFHRKDNLNPRQLNLHLTPPHSQYAVPNRHFQHVSQIPRQPYPLQQQQNLL
SQQQNHLPEQQNQMPPQQSQVVQQHNHLNQQPPQPSQLSPAYQAGPSQSFFNNPIPHRPH
SPAVDAVISEQHPPPMLQEVNNPLRPIAQHNPVLPTHLNNFIEENPSGMXXXXXXXXXXX
XVDRMHGNVALETIRQQQQARLQQWNEHNAYLSQGTIPYQHHHHPHLPHLPQQPIGLHQQ
QQVRANWKLASNTEDETEATYSRFQDLLRELSHRDQSESRDLAEMPPPQSRLLQYRQVQP
RSPPALPSPSCNSNHSGHFPNFTESNRDIEIPSNPAFQQHLPQIYNPPFSMPSEHITPSP
LKYLQPDGSWTYANLQQNHLMGQGFHYGIPPLPHRSQQNPFIQIQNHQHAVGQEPFHPLT
SRAVSASSLHSLEEYEPRGPGRPLYQRRISSSSVQACSEELSTPQDSLGQCKELQDHSNQ
SSFNYSSPELWVNSSSSAPYPNIPCNGANRAVPPRELLAPPKTVKPPEEHLKAENIQLSN
SFNYSVLQHLGQFPPLMPNKQIVESNSNSQQNAGGSKPVMSYASALRAPPKPKPPPEQTK
KNSDPLSLFQELSLGSSSGSNGFYSYFK
NT seq
5847 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagaagaccagaggagtcatgtgaacaagcatgtgaatctcttaagcagcag
gattatgaagtggcagtgaagcattgcacagaggctctcctttccctcagccagtacccc
ccagctcacctcccggaggcatgccaggcagaaatcgaccgcatcaaaatcgagactctt
ctgtatagaattgcttcctttttacaacttaaaaagtatgggcaagcagatgaagactgt
aggcatgtgctgggagaggggctggccaagggagatggatctttccgtgcagtgctctgc
tgcatgcatcttaaagggaagctgcaaattgtgtctaatgttctttccaaatcactgatg
ggtgaatcactgaacgggatggtaactaaagatctgacacgactgaaaacacttcttgct
gaaacagaggcagctggtaaagtaccatcaggatatcatgtagaagatttagaagaaggg
tcccgggatggctggcagtttcgccctccacccaggggagtcacaagcagtgaagaatat
acactatgtaaaagatttttagagcaagggatctgcaggtacggtgcacagtgtacttca
gcacattcccaggaagagctaacagaatggcaaaaacgatatgcttcccgcttgatcaga
ttaaaacagcagaaggaaaacaaacaatgttcgggcagttatatggaaacgttgattgag
aaatggatgaattcgttatctcctgagaaagtgcttagtgaatgtgtagagggagtgaga
gtagaacataatcctgagctatcggtaactgtcaccaccaaaaagtctcatcagacatgg
acatttgctctcacttgtaagcctgcaagaatgctgtatcgagtggcattgctttatgat
gcccatcgtccacattttagtatcgttgcaatatctgctggagacagcactacccaggta
tcacaagaagttccagaaaactgtcaggaatggataggaggaaagatggtccagaacgga
atagatcattatatatacaaagtcagtatagcctttaacacagaaatctttggaactttt
cgccaaactgttgtgtttgattttggattagaaccggtcctcatgcaacgagtaatgata
gatgctgcttcaactgaagatcttgaatacctgatgcatgcacggcaacagctactaacc
acagctaagcgttgggattctacttctaagactattgtagaatttgagcctaatgaaact
actgaattggagaagagccttcttaccagataccaaatccctctatctgctgaccagcta
tttacacaatctgtcctggacaaatcattgaccaagaccaactatcagtcgcggctacat
gacctcctttatatagaggaaatagcacagtataaggaagttagcaagttcaacataaaa
gtgcaattgcagattgtagcaagcttcatgctcactggtgtttctggaggtgcaaagtat
gcccaaaatggacaactttttggccgctttaagctcactgaaacgctttcggaagacact
ttggcgggacggctggtgatgaccaaagtcaatgctgtttatttattgcctgtcactaaa
gagaagtcagcacagacccaaggaaccaaagagaaggtttatgaagcagctattgaggag
aaaacaaaggattatatcttcttgagggtatccagggaatgctgtgaagaacttaatctt
cgggcagattgtgaaatgcaggttgaacttcagtttcagttaaatcgcttacccctctgt
gaaatgcattatgccttggacaggattaaggacaacagtattttgtttccagatgtcagc
atgactcccaccataccctggagtcccaacagacaatgggatgagcagttggaccctcgg
ctaaatgctaagcagaaagaggctgttctggctatcactactccactttcaatacaactg
cctcctgttcttatcatcggtccctatgggacaggaaaaacgttcactctggctcaggca
gtcaagcacatactccaacaacaggatactaggattctcatttgcacccattctaatagt
gctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaatccccag
gcaagacctctcagggtatatttcagaaatcgctgggtaaagactgtccacccagttgtg
catcagtactgtttgatttcaagcacacattccacctttcagatgccacagaaagaagac
attcttaagcaacgagtagtagttgttactttaaatacatcacagtatctatgtcaactg
gatcttgaaccaggtttttttacacacattctgttagatgaagctgcgcaggctatggag
tgtgaaactattatgcctctagcgttagctaataaaaacacaagaattgtcttggctgga
gaccatatgcagctcagtccttttgtctacagtgaatttgccagggaaagaaacctccat
gtttcattgcttgatcggctctatgagcactaccctgcagaatttccatgcaggatcttg
ctgtgtgagaactatcgctcccatgaagctatcatcaattatacatctgaacttttctat
gaaggcaaattgatggcaagtggaaagcagccagcacacaaagatttctaccctttgact
ttcttcacagcacgtggagaagatgtgcaagaaaaaaacagtacagctttttacaataat
gcagaggtgtttgaagtagtagagcgtgttgaagaattaagaagaaaatggcctgttgcc
tggggcaaattggatgatggcagtataggtgtcgtaacaccttatgctgatcaagtgttc
agaattcgggctgaacttcggaaaaaaagactgtctgatgtcagtgtagagagagtgcta
aatgttcagggaaaacagtttagagttttgtttctcagcacagtacgaacacggcatacg
tgcaaacataagcaaacaccaatcaaaaggaaagagcagttactggaggattcaacagaa
gacttggattatggttttctgtctaattacaaacttctcaacactgccattacaagagca
caatccttggtagctgtggtgggagatcctattgctttatgttccattggaagatgcagg
aaattttgggaaaggtttattgccctatgtcatgagaatgaaagtctccacggtatcaca
tttgaacagatcaaagctcagttggaagctttggagttaaagaaaacttatgtgttgaac
ccactggctcctgagtttatcccccgagctcttcggcatcaacattcagcgaataccacc
aaacaacagcagtcaccaccaaagggcaaggtccatcatcataaccagaatgaccatttc
ccacctgatggaatcgttcagcccaatccttctgttctaatcggaaatcccatccgagca
tatactcctccccctcctcctctgggacctcaccccaatctggggaaatctccaagtcct
gttcaaaggatagatccacacactgggacaagtattctatatgtacctgctgtctatgga
ggaaatatggtcatgtctgtgcctttgcctgtaccatggacggggtatcagggtaggttt
gcagttgaccctcgaatcattactcatcaagcagctatggcatataatatgaacctgtta
caggcacatgggcgcgggtctcctatcccttatggcctgggacatcattcaccagttagc
ataggacaacagcagcagcttcagcatcaagacaaggagcaacatgaacaaagtcgaaac
ggtaaaagtgaaaacactgctggacctgaaatcagtaaaattcgaacccctgagaagaaa
cctgtggaatccaagcaggttgacttagaagcaaattctcagaatagaagcccagagtca
cgttccagtgttggttatcctaatgctaaatttcatcgcaaagataatcttaaccccagg
cagctgaatctacatctcaccccaccccactcacagtatgcagttcccaatcgccacttc
cagcacgtgtcacagataccaaggcagccatatcctctgcaacagcagcaaaacctttta
agtcagcaacaaaatcatttgcctgaacaacaaaaccaaatgccaccccagcaaagccag
gtagtccagcagcataatcatttgaatcagcagcctccacaaccttcgcagctttcccct
gcttaccaggcaggccccagccaatctttttttaataatccaattccccaccgaccacat
tctcctgctgtagatgctgtgatttcagaacaacaccccccacctatgttacaagaagtc
aataatcctttgaggcctattgcacagcacaaccctgttctgccaacccacttgaacaac
ttcattgaagagaatccatcaggaatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntt
taggtagatcgtatgcatggaaatgtagctttggaaacaataaggcagcaacaacaagcc
aggttacagcaatggaatgaacataatgcctatctcagtcaaggcactattccatatcaa
caccatcaccatcctcatctaccacatcttcctcagcaaccaattggattgcatcaacag
cagcaagttagggcaaactggaaacttgccagtaatacagaagatgaaacagaggcaaca
tattcaagattccaggatttgctcagagaactgtcacaccgtgatcaaagtgaaagtcgg
gacttagctgaaatgccaccccctcagtcaagactgttgcaatacagacaagttcagccc
agaagcccaccagcactcccttctccttcctgcaactctaaccacagtggtcactttcct
aacttcactgaaagcaacagagacattgaaatacccagtaacccagcatttcagcagcat
ttaccccaaatatacaatccccctttctcaatgccatctgaacatataaccccatctccc
ttgaaatacctgcaacctgatggatcgtggacttacgctaacctacagcagaatcacctt
atggggcagggctttcattatggtatacctccattgccccataggtcgcaacaaaaccct
tttatacaaatacagaatcatcagcatgcagtcggtcaggagccatttcatccactcaca
tctcgagcagtatctgcttcttcgctccacagcttagaagagtatgaaccaagaggacca
ggcaggccgttgtaccaaagaagaatttcctctagttcagtccaggcttgttctgaagaa
ttaagcactcctcaagacagtcttggtcagtgtaaagagcttcaggaccacagtaaccag
tcatctttcaactattcatcacctgagttgtgggtaaactcctcctcatctgccccatac
ccaaacattccatgcaacggagccaacagagcagttccaccccgggagttgttagctcct
ccgaagacggtcaagcccccagaggaacacctgaaggccgaaaacatacagctatccaat
tccttcaactacagcgtgctacaacatcttggccagttcccacctctcatgcccaacaag
cagatcgtcgagtcgaacagcaacagccagcagaacgccggcgggagcaagcctgtcatg
tcctacgcaagtgctctgcgggctccgccaaagcccaaacctcctcctgagcagacaaaa
aagaatagcgaccctttgtctttgtttcaggaacttagcctaggtagttcatcaggtagc
aatggcttttactcctattttaaataa
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integrated database retrieval system
