Pelecanus crispus (Dalmatian pelican): 104037862
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Entry
104037862 CDS
T08340
Symbol
PKD1L2
Name
(RefSeq) LOW QUALITY PROTEIN: polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcri04040
]
104037862 (PKD1L2)
Ion channels [BR:
pcri04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104037862 (PKD1L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
REJ
Gal_Lectin
Lectin_C
Ion_trans
GPS
Abhydrolase_9_N
AGA2
Motif
Other DBs
NCBI-GeneID:
104037862
NCBI-ProteinID:
XP_009490338
LinkDB
All DBs
Position
Unknown
AA seq
2503 aa
AA seq
DB search
MTRVTSQAFEEGSKKSGDVISKTSTTRGTELRMWLGSTVLISLAAWLAVEEATVDEGIPC
SKYQLAFNHSCYEFVRLQRTFTSAQSWCERGGGHLVFIENEETQEFLQKHIAEDQEWWIG
LISNSLLNETTDGLMIWLDTSNISYSNWYKDQPSPFSSTCGYILKNAKYQWGVTENCSQE
FDFICEFEAGQSIACDNYNATVQCGSGEVIQIGDSFYGRKTPHYCVSETPHQYDTDEECS
WISVKDEVAGQCHGLQACQVAADGAFFGDPCPASGSYLSIQYHCKEGLQLVVPDTCFVFE
KIMVSLNWLLSPYSGNLSCIISTGDGHTIDPYYPLTLVSNVTYRYSSPGEFTVFVECTTS
EWHVMAQKRVTVQDKMDQLSITGCYSQHESGNSSHCRTLYGESLWIQVELNGGNGVTYII
LADNMTLTESSAKEGIAPHNLTLDSAAQELLGPGTHQLEIRASSNTTASEISESIAVCFI
EPVSGLQAALASHTLQLGENLEINVSVSHGAPDKLKFEVIGSNETHSHKEGGPHGEPQTY
IIPVHSEGIFRVKVVAMNAFSNMSLDLGFITVLANSSHKEDSAKKEGSSKTNIQKTNDHK
RKTKIYIKPSRHVGPFTTVTLGWPDNNNDSSFLWSCGACWPEWNKCVQQQIILTNQTEVH
IPPSCLPPPKSAVTVRVTVRNHGNEERQDEQCLYVTAKQELQLEIRCEANCKPVNASDEV
VLSVSGQKDSQAIYYNWYLDNTFQSKPTPLPLACGLTGFRQNSLNLLQSNTSMLKMNSSF
LQTQGEAFQIKVTAMTQRGYGEQTYLVSTVPPPEIPSCAVSPKQGSVLTTFTVSCSAPCL
ADSCQSHRNRQLTYCFYLKSNSLLHCGPDPELFPVYLPLGEEENNFILHMTITISNNYGD
TVQTNASVKVGHADVIDGNLTLPAIVSEKANTILKDGNNSMSLFQLYKSVTSVLNQETQE
ESFNLSLQMDTRKELRGLMLTTLSAVNVTSVQTALKMSEVLKEITYRSEELSVSAQVEAS
NTLKDVSASLLTVNAEDSRDDQNLKDAANYLFNAVSNVLKASAEIRATNTSVPEAEQSSV
SHQLLNTVENLQSALLFGKEPDDEPTVLTTPSATMYIHRLQTENMDGTSINITSSSSASF
TLPPASSLSVSGVDDETVDIRMVSFAVNPFFSSDASFDISGTVGGLSLTGLDGLSIPVSN
LKENIEIILPRLSATQEDKILLNLANFSTFQVNITSENTSIVIHLESEHDIPLILYLGYG
YRPNGTNYDMKNHLLCKKTTGGETNTWVLSPEELIFGEGTYYFMVLQDTGIDSTVYERLT
IAVTCFASRCVFWDEHQGNWNSYGCHVGPKTNPRSTQCLCNHLTFFGSSFFVIPNAIDVS
KTAQLFGTFVDNPVVVTTVGCIFLIYVLVVIWARRKDIQDDAKVKITVLEDNDPFAQYRY
LVTVFTGHRRGAATTSQVTLTLYGLEGESEPHHLTDPDTPVFERGGVDIFLLCTLFPLGE
LQSIRLWHDNSGDSPSWYVNRVLVHDLAWDQKWYFLCNSWLAVDIGECVLDKVFPVATEQ
DMKQFSNLFFMKTSKGFQDGHIWYSVFSRSPRSSFTRAQRVSCCFSLLLCTMLTSIMFWG
VPKDPAEQKMDLGKIEFTWQEVMIGFESSLLMFPINLLIVQIFRNIRSRPAMQGREKKPG
KNGRVSPSLPPTPQVTQAVSLTPEAVIKDIRRIANSLFKALKTPSPTSVSDLGKSTNINT
LLALVEDIICQQNRTGQEFYDDSRKKNDPVIVTLGAMDVQEKTRSPTPEKELCERLKYSD
YNRCLYMQLQQVEMELELLGPHKFQMPQSYTQAVRQVQHMKNLLGLSRWSLTPSFSGDGK
KSSSSKGLPWWFVFIAWFLVAATSGVSGFFTMLYGLHYGKENSIKWLISMAISFLESLFI
TQPLKVLGFAAFFALVLKKVEHEDEENTAIDGPLSAPGNCLXSDSNPLFGARRDSRSNIY
RPPPAADVEKMKISCMKEQKAFALIREILAYLGFLWMLLLVAYGQRDPNSYYLNKHIENS
FTDGFQDVYSYRDFFTWANTTLVKNLYGSYKGFITDGNSKLVGSARIRQVRVKGDTCPIS
PKFQRVIQECHAPYSLQTEDTSDYGEHWNTSVFDNSSDLSSAWQYQSQSKLRGQPTWGKL
GVYRGGGYVIHLGTDPKNASRILQYLFNNVWLDTFTRAAFVEFTVYNANVNLFCIISLMF
ETNALGAFFTSAELQSVRLYPYTNSLHIFVVAAEVIYFLFIVYYMIVQGKLMKTLKWRYF
HSKWHLLEMAIILISWSALSVFVKRTILGTRDISYYQEHKEDCVSFNETARADAVLGYLI
AFLVLLSTVKLWHLLRLNPKLNMITSTLRRAWGDISGFITVIAIMFLAYSIATNLIFGWK
LYSYKTVFDSAETMVSLQLGIFNYEEVLDYNPILGSFLIGSCIIFMTFVVLNLFISVILV
AFSEEQKHYQASEEEEIVDLMLMKLFSFFGMKCKKEEKAVTDD
NT seq
7512 nt
NT seq
+upstream
nt +downstream
nt
atgacaagggtgacatctcaagcttttgaagaaggcagcaaaaagagtggtgatgtgata
agcaagaccagtaccacacggggcactgagctgagaatgtggcttgggagcacagttctg
atttctcttgctgcatggttggctgtggaggaggcaaccgttgatgaaggaatcccttgc
tcaaagtaccagctagctttcaaccattcgtgctatgagtttgttagactccagcgtacc
ttcacaagtgcccagagctggtgtgagagaggaggggggcaccttgtctttattgaaaat
gaggaaactcaagagttcttgcaaaaacatattgctgaggatcaggaatggtggatagga
ctgatctcaaactccttgctgaatgaaactactgacgggttaatgatttggctggacact
tcaaatataagctacagtaactggtacaaggatcagccatctcccttctcatccacatgt
gggtacatcctgaagaatgccaagtatcagtggggcgtgactgaaaattgcagccaggaa
tttgacttcatttgcgagtttgaagctggccagagcattgcttgtgataattacaatgcc
actgtacaatgtggatcaggagaagttattcaaattggagacagcttctatggacggaag
acccctcactactgtgtatcggagactcctcaccagtatgatacagatgaagaatgtagc
tggatcagtgtcaaagatgaagtagcaggccagtgtcacggtctccaggcctgccaggtg
gcagcggatggcgctttctttggagatccctgtccagcttcgggaagctatttgtctatc
caataccactgcaaggaaggtctgcagctggttgtaccagatacatgctttgtctttgaa
aagatcatggtcagtttgaactggctgctctctccgtactctggcaacctttcctgtatc
attagcactggagatggccacactattgatccttactaccctctaacactggtcagcaac
gtcacatatagatactcatctcctggagaatttactgtttttgtggaatgcaccaccagc
gaatggcacgtgatggcacagaagcgggtgactgttcaagataagatggatcaactaagc
attactgggtgctatagccagcatgaatccgggaacagctcccactgccgtacgctgtat
ggggagtcgttgtggattcaagttgaactcaatggaggcaacggcgtgacctacattata
ttagcagataacatgacactcactgaatccagtgcaaaggaaggaattgcccctcacaat
ctgacactcgacagtgccgctcaagagctgctgggcccagggacacatcagctggaaatc
cgagcatccagcaacacaaccgcatcagagatctctgagagcatcgctgtttgcttcatt
gagccagtatctggtcttcaggctgcattagcttctcacaccctgcagctgggggagaat
ttggagataaatgtctctgtgtctcatggtgccccagataaactgaagtttgaggtgatt
ggatctaatgaaactcactctcacaaagaaggcggcccacatggggaacctcaaacgtac
atcatccccgtgcactcggaaggtattttccgagtgaaagtggtggccatgaatgccttc
tcaaacatgagtctggatcttgggttcatcactgtgttggcaaacagttctcataaagaa
gattctgctaagaaagaaggcagctccaaaacaaatatccaaaagacaaatgatcacaaa
agaaaaaccaaaatatatattaaaccgagtcgccacgtgggtcctttcacaactgttacg
cttggctggccagacaacaacaatgattccagttttctctggtcctgtggagcttgctgg
cctgagtggaacaaatgcgtgcagcaacagataatcctgaccaaccaaactgaggtgcac
atcccaccttcctgccttcctcctccaaagtcagcagtgactgtcagggttacagtccga
aaccatggcaatgaagagaggcaggatgagcaatgtctctatgtgactgcaaaacaagaa
ctgcaactagaaatcaggtgtgaggcaaactgcaagccagtgaacgctagtgatgaagtt
gttttgagtgtctctggacagaaggactcccaggccatatattacaactggtacttagat
aacacgttccaaagcaagcctacgcccctccctctagcctgtggcctgactggtttccgg
cagaactctctgaatttgcttcaaagcaacacgtccatgttgaaaatgaacagctccttc
ttgcagacacagggagaagcttttcagattaaagtgacagcaatgactcagcgtggctac
ggggagcaaacataccttgtcagcaccgtgcctccgcccgagatccccagctgcgccgtg
tctcccaagcagggatcagtgctcaccacgttcacggtctcctgcagcgctccttgcttg
gcggattcatgccaatcccatcgcaacaggcagctgacatactgcttctatctgaaatca
aattctctcctgcactgtggcccggatcctgaactcttccctgtttatcttccacttgga
gaagaggaaaataatttcattttacatatgacaattaccattagcaataactatggcgat
accgttcaaactaatgcttcagtgaaggttggacacgcagatgtgattgatgggaacctg
accctgccggctattgtatctgagaaggcaaacaccatcctaaaagatgggaacaacagc
atgagtcttttccagctgtacaagtcagtgacatcagtcctaaatcaggagacccaagag
gaaagctttaacctatctttacagatggacacacgaaaagagctccgagggctgatgctg
acaactctctctgctgttaacgtaacgtcagtgcagactgctcttaagatgtcagaagta
ttgaaagaaatcacttacaggagtgaagagctgtctgtctcagcacaggtggaagctagc
aacactctaaaagacgtcagtgcttccttactcactgtaaacgcagaggacagcagagat
gatcagaatttaaaagatgcagccaactatctatttaatgcagtgagcaatgtccttaaa
gcttctgcagaaatcagagctacgaacacttcagtgccagaggcagaacagagttcagtg
tcgcaccagctcctgaatacagttgaaaatctacagagtgcccttctgtttgggaaagaa
ccggatgatgaaccaacagtccttaccactccttctgccacaatgtacatacacagatta
caaacagaaaacatggatggcacatccattaatatcaccagttccagctctgccagcttt
actctcccacctgcttcctctctcagtgtttcaggagttgatgatgaaacagtggacata
cggatggtgagctttgccgtgaatccctttttctccagtgatgctagttttgacatcagt
ggaacagtgggaggtctaagtcttactggtctggatggtttgagcataccagtcagcaat
ctcaaagaaaacattgagataatcttaccaaggctttcagcaactcaggaagataagatt
ctgttgaatctggctaattttagcactttccaagtcaatatcacctcagaaaacacatct
atagtgatccacctggaatctgaacatgacattccactaatactctacttagggtacggt
tatcgtccaaatggaactaactatgatatgaaaaatcacctgctctgtaagaaaacaact
ggaggtgagacaaatacctgggttcttagcccagaagaactcatttttggagagggaacc
tactatttcatggttttacaagatacgggaatagattccacagtctatgagaggctaact
atagctgtcacttgcttcgcatcccgctgtgtgttttgggatgagcaccagggcaactgg
aacagctacggatgtcatgtaggaccaaaaacaaatcctagaagcacacagtgcctctgc
aaccatctgaccttctttggaagctcgttcttcgtcatacccaatgccatagatgttagc
aaaactgcacagttatttggcacatttgtggacaaccctgtggtggtgacaactgtagga
tgcatctttctgatatatgtgcttgtagttatttgggctcgaaggaaagacatccaggat
gatgccaaagtgaaaatcacagtactggaagacaatgacccctttgctcagtatcgttat
cttgtgacagtctttacaggacaccgccgaggggcagccacaacctcccaggtgactctc
accctctatggactggaaggagagagtgagccacaccatctaactgatcctgatacacca
gtctttgaacgtggaggagtggatattttcctactctgtaccttattccctcttggggaa
ctgcagagtattagattgtggcatgataattcaggggacagtccatcctggtatgtgaat
cgagtattggtgcatgatctggcatgggatcagaaatggtacttcctctgtaactcctgg
ctagccgttgatattggagaatgtgtcctagataaagtgttccctgtagctacagaacag
gacatgaagcagttcagcaatctgtttttcatgaagacctccaagggtttccaggacggg
cacatctggtactcagttttcagccgctccccacgaagctccttcacacgagcccagcgc
gtgtcgtgctgcttctcactgcttctctgcaccatgctgaccagcatcatgttctgggga
gtgccaaaggacccagctgagcagaaaatggatttgggtaagatcgagttcacatggcag
gaagtgatgattggctttgagagctccctcctcatgttccccatcaacctgctcattgtg
cagatcttcaggaacatacgatcccggccagccatgcaggggagagagaagaagccggga
aagaatggtcgagtgtccccaagcctacctcccaccccacaggtcacccaggccgtctca
ctcactccagaggctgtgataaaggatataagaagaattgccaactcactctttaaagcc
ctgaagactccatctcccacttcagtatcagatcttggaaaatcaactaacatcaacacg
cttttagcattggttgaggacatcatttgccagcagaaccgaactgggcaagagttttat
gacgacagcagaaagaagaatgaccctgtaattgtcacattaggtgctatggatgtacaa
gaaaaaacaagaagtccaactccagagaaggaactatgtgagcgactgaaatacagtgat
tacaatcgctgcttgtacatgcaactccagcaggtcgagatggagctggaattactgggg
ccccataaatttcagatgcctcagagttacacacaagctgttcgtcaggttcagcacatg
aagaacctcctgggactctccaggtggtccctaactccaagcttctctggtgatggcaag
aaaagttcttcttccaaagggctgccctggtggtttgtgttcattgcttggttccttgtt
gcagccaccagtggtgtgtctgggttctttaccatgctctacgggctgcattacggcaag
gagaactccattaagtggctgatctccatggccatctccttcttggaaagtcttttcatc
acacagcccctaaaggtgctgggatttgctgctttttttgctctcgttctgaagaaggtg
gaacatgaggatgaagaaaacacagctattgatgggcctttatctgcaccaggtaactgt
ctgtaaagtgattcaaatcctctctttggagcccgaagggacagtagaagcaatatttac
cggccacctcctgcagctgatgtggagaaaatgaaaatcagctgcatgaaggagcagaag
gcatttgccctcatcagagaaatcctggcctatctggggtttctatggatgctgttactg
gttgcctatgggcagagagatcccaattcctactacttaaacaagcacattgagaacagt
tttacagatggattccaagatgtctacagttatcgggattttttcacgtgggcaaacact
accttagtcaaaaatctttacggatcatataaaggattcattacagatggcaattccaag
ctggtgggtagcgctcgaattcgccaagtaagagtgaaaggagacacctgccctatttct
cccaaattccagcgtgtgattcaggaatgccacgctccatattccctacaaacagaagat
acatcagattatggggaacactggaatacttcggtcttcgataactcctctgacttgagc
tcagcatggcagtatcagagtcagtccaaactgagggggcagcccacctggggcaaactg
ggcgtctacaggggagggggatacgtgatccacctgggaactgatcctaagaatgcctcc
agaattctccagtaccttttcaacaacgtctggctagacaccttcacaagagcagcgttt
gttgaatttacagtctacaatgccaatgtgaacctgttctgcattataagcctgatgttt
gaaaccaatgctttaggggccttcttcacgagcgcagagctgcaaagtgtccggctttac
ccgtacaccaacagtctccacatcttcgtggttgcagcagaagtaatttatttcctcttt
attgtgtactacatgatagtacagggaaaactgatgaagactctgaaatggagatacttc
cacagcaagtggcatctcctggagatggccattatattgattagctggagtgccctgtca
gtgtttgtgaagcggacaatccttgggacccgagacatcagctactaccaggaacacaaa
gaggactgtgtaagctttaatgaaacagcaagagctgatgcagttcttggctacctgatt
gcgttcctagtgcttctctccacagtgaaactgtggcatctcctgaggctcaaccctaaa
ctaaacatgatcacttcaactctaaggagggcatggggagatatctctggattcatcacc
gttattgcaatcatgttcctcgcctactccattgctacaaacctgatatttggctggaag
ctctactcttacaaaactgtctttgattcagcagagaccatggtcagtcttcagctggga
atcttcaactatgaggaggtcttggactacaatccaatcttaggctccttcttaattgga
tcctgcataattttcatgacatttgtggtactgaatctgttcatttcggtgattctggtt
gcttttagtgaggagcagaagcactaccaggcttcagaggaagaggagattgttgaccta
atgctaatgaaacttttcagtttcttcgggatgaagtgcaagaaggaggagaaggcagtc
actgacgattaa
DBGET
integrated database retrieval system
