Pelecanus crispus (Dalmatian pelican): 104038876
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Entry
104038876 CDS
T08340
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcri03021
]
104038876 (CHD1)
03036 Chromosome and associated proteins [BR:
pcri03036
]
104038876 (CHD1)
Transcription machinery [BR:
pcri03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
104038876 (CHD1)
Chromosome and associated proteins [BR:
pcri03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
104038876 (CHD1)
SLIK complex
104038876 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
DEAD
Motif
Other DBs
NCBI-GeneID:
104038876
NCBI-ProteinID:
XP_009491667
LinkDB
All DBs
Position
Unknown
AA seq
1465 aa
AA seq
DB search
MKKLDNYKKKDQETKRWLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAG
YPDYYCKWQGLPYSECSWEDGALIAKKFQARIDEYFSRNQSKTTPFKDCKVLKQRPRFVA
LKKQPSYIGGHESLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFH
EHQLYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLK
FNILLTTYEILLKDKSFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTP
LQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKS
LPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLI
RPPDDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLK
YRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSD
WNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGK
TVLHTGSTPSSSTPFNKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENE
PGPLTVGDELLSQFKVANFSNMDEDDIELEPERNSRNWEEIIPEVQRRRIEEEERQKELE
EIYMLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKG
FSDAEIRRFIKSYKKFGGPLERLDAVARDAELVDKSETDLRRLGELVHNGCIKALKDNSS
GQERAGRLGKVKGPTFRISGVQVNAKLVISHEEELAPLHKSIPSDPEERKRYVIPCHTKA
AHFDIDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLTQKILPDDPDKKPQAKQLQTRA
DYLIKLLNKDLARKEAQRLAGAGNSKRRKTRTKKNKVIKAAKMKEEIKSDSSPQPSEKSD
EDDDEDNKDEIVSVKHPHKKIKAEKENEEKPEPDIGIKKEAEEKRETKEKENKRDLKREK
KEKEDKKELKEKDIKEKRENKVKESTQKEKEVKEEKVNEIKSENKEKTKKISLLDTPVHI
TATSEPVPISEESEELDQKTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIK
IGDHITECLKEYTNPEQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQHNDQ
NISSNVNTHVIRNPDVERLKENTNHDDSSRDSYSSDRHASQYHDHHKDRHQGDAYKKNES
RKRPYSAFSNGKDHRDWDHYKQDSRYYSDSKHRKLDDYRSRDHRSNLEGSLKDSRAHSDH
RSHSDHRIHSDHRSTSEYSHHKSSRDYRYHSDWQMDHRASGSGPRSPLDQRSPYGSRSPL
GHRSPFEHSSDHKSTPEHTWSSRKT
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagctggacaactataagaagaaggatcaggaaacaaaacgatggctgaaaaat
gcttctccagaagatgtggaatattacaactgccagcaggagcttacagatgatctacat
aaacaatatcagatagtggaaagaataattgctcattcaaatcagaaatcagcagctggt
tatccagactactattgcaaatggcagggtctgccttattcagaatgtagctgggaagat
ggtgctctcattgccaagaagtttcaggcacgcattgatgagtacttcagcagaaatcaa
tccaagaccactccctttaaggattgcaaggttctaaaacagaggccaaggtttgttgcg
ctaaagaagcaaccatcttacattggaggacatgaaagtttagagttaagagattatcag
ttaaatggattgaattggcttgctcactcatggtgcaaagggaatagctgtattcttgca
gatgaaatgggtctgggtaaaacaatacaaacaatttcttttctgaactacctgttccat
gaacatcaattgtatgggcctttcttgctggttgtgccactttctaccttgacatcttgg
caaagagagattcaaacttgggctcctcagatgaatgctgtagtttacttaggagatata
actagcagaaatatgattagaactcatgaatggatgcatccacagactaaacgattaaaa
tttaacatacttctaacaacatacgaaattttgctgaaggataagtcattccttggtggt
ctgaattgggcgttcataggagttgacgaagctcatcgcttaaaaaacgacgactctctt
ctgtacaagactttaatagactttaagtctaaccatcgtcttcttattactggaacacct
ctgcaaaactccctcaaagagctttggtctttgttgcacttcatcatgccagaaaagttt
tcctcctgggaagattttgaagaggagcacggcaaagggagagagtatggttatgcaagt
cttcacaaagaacttgaaccatttctgctgagaagagttaaaaaagatgtagaaaagtct
ttacctgctaaagttgagcaaattctgaggatggaaatgagtgcattgcaaaaacaatat
tacaagtggattttaaccaggaattataaagccctcagtaaaggttcaaaaggcagtacg
tcaggctttttgaacatcatgatggaactcaagaagtgttgtaaccattgctacctcatt
agaccaccagatgataatgaattctataataaacaggaggccttacagcatttaatacgt
agcagcgggaaactaatccttcttgacaagctactgattcgtctgcgagaacgtggcaac
agagttctgattttctcacagatggtgaggatgctggacatcctagcagaatatctgaag
tatcgtcagtttccctttcagagacttgatggatcaataaaaggggaattgaggaaacaa
gcactggatcattttaatgcagaaggatcagaggacttctgcttcttactgtctactaga
gctggaggattaggtatcaacttggcttctgctgacactgtagtaatatttgattctgac
tggaatccacagaatgatctccaagcacaggctagagcgcataggattggacagaagaaa
caggttaatatttatcggctagtcacaaaaggatcagtagaagaagatattcttgaaaga
gccaagaaaaagatggtgttagatcatttagtaattcagagaatggacactacagggaaa
accgtactacatacaggctctactccttcaagctcaacaccttttaataaggaggagtta
tcagcaattttaaagtttggtgctgaggaactttttaaagaacctgaaggggaagaacag
gagccccaggaaatggatatagatgaaatcttgaagagggctgaaactcgggaaaatgag
ccaggtcccttaactgtaggagatgaattgctttcacagttcaaggtggccaacttttcc
aatatggatgaagatgatattgagttggaaccagaaagaaactcaagaaattgggaagaa
atcattccagaagtccagcggcgaagaatagaagaggaggaaagacaaaaagagcttgaa
gaaatatacatgctcccaaggatgagaaactgtgcaaaacagatcagctttaatggaagt
gaagggaggcgcagtaggagcagaagatactctggatctgatagtgactccatctcagaa
agaaaacggccaaaaaaacgtggaagaccacgaaccattcctcgagaaaatattaaagga
tttagtgatgcagagatcaggcggtttatcaagagttacaagaaatttggtggccctctt
gaaaggttagatgctgtagctagagatgctgaattagttgataaatcagagacagatctt
agacgtttgggagagcttgtacataatggatgcattaaagctttaaaggacaattcatct
ggacaagaaagagcaggtagacttgggaaagttaaaggtccaacattccgcatctcagga
gtgcaggtgaatgcaaagctagtcatctctcatgaagaagagttggcaccattgcacaaa
tccattccttcagatccagaagaaagaaaaagatatgtcatcccatgccacaccaaggct
gctcattttgatatagattggggtaaggaagatgattccaatctgttaataggcatctat
gaatatggttatggcagctgggaaatgataaaaatggatcctgatcttagtttgacacag
aagattttgcctgatgatccagataagaaaccccaggcgaagcagttacagacccgtgca
gactacctcattaaattactgaataaagaccttgcaaggaaggaagcacaaaggcttgct
ggtgcaggcaattcaaagaggaggaaaacaagaactaagaagaataaggtgataaaggct
gcaaaaatgaaagaagaaataaaaagtgattcttcaccacaaccctcagaaaaatctgat
gaagatgatgatgaggataacaaggatgagattgtttcagtgaaacatccacataaaaaa
attaaagcagaaaaagaaaatgaagaaaagcctgagccagatattggtataaagaaggaa
gctgaagaaaaaagagagacaaaagaaaaggaaaataagagggatttgaaaagggagaaa
aaagaaaaagaggataagaaagaattaaaggaaaaagatattaaagaaaagagagaaaac
aaagtaaaagaatctacacagaaagaaaaagaagtgaaggaagagaaggtgaatgaaatc
aaatctgaaaataaagaaaaaactaaaaaaatttcattgttggatactccagttcatatt
actgcaactagtgaaccagttcctatatctgaggaatctgaagaactggatcagaaaact
tttagcgtgtgcaaagaaagaatgaggcctgtcaaagcagcattgaaacagctggaccga
ccagagaagggcctttctgaaagagagcagctggaacatactagacagtgtctaatcaaa
attggggatcacattactgaatgtctaaaggagtacacaaatcctgaacaaattaaacag
tggagaaagaatttgtggatttttgtctctaagtttacagaatttgatgccagaaagttg
cacaaactgtataaacatgcaatcaaaaaacgccaagagtctcagcaacacaatgaccag
aatattagcagcaatgtgaatacacatgtaattagaaatccagatgtggaaagactaaag
gagaatacaaaccatgatgacagtagcagggacagttactcttctgatagacatgcttca
caataccacgatcatcataaagacaggcatcagggagatgcttacaagaaaaatgagtct
agaaaaaggccatattcagccttcagcaatggaaaagatcacagagactgggatcactac
aaacaagacagcagatactacagcgatagtaaacatagaaagttagatgactacaggagc
agagaccataggtcaaacctggaaggaagtttaaaagacagccgggctcattcagatcac
cgttcccattcagaccataggatacattcagatcaccgttccacctcagagtacagccat
cataaatcttctagagattataggtaccactcagactggcaaatggaccacagagcttcg
ggtagtggcccaaggtcaccattagatcagaggtctccttatggttcaagatctccccta
ggacacagatctccatttgaacactcatcagatcacaaaagtacacctgaacatacatgg
agtagccggaaaacataa
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integrated database retrieval system
