KEGG   Pelecanus crispus (Dalmatian pelican): 104038888
Entry
104038888         CDS       T08340                                 
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-6(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
pcri  Pelecanus crispus (Dalmatian pelican)
Pathway
pcri04510  Focal adhesion
pcri04512  ECM-receptor interaction
pcri04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pcri00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    104038888
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    104038888
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    104038888
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pcri04147]
    104038888
   00536 Glycosaminoglycan binding proteins [BR:pcri00536]
    104038888
Exosome [BR:pcri04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   104038888
Glycosaminoglycan binding proteins [BR:pcri00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   104038888
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 104038888
NCBI-ProteinID: XP_009491681
LinkDB
Position
Unknown
AA seq 1392 aa
GGKKSYSGPCGGRDCSAGCKCFPEKGARGRPGPIGLQGPIGAPGLTGPEGLPGPKGERGA
VGPPGPPGQKGDKGPMGVPGFQGINGIPGHPGQSGPRGLPGLDGCNGTTGSPGVSGSDGF
PGLPGLPGHPGPKGLKGEPVFAQGSLKGMKGENGLPGLDGISGPKGLPGPIGSAGPIGLP
GLQGPVGPPGPPGPKGNMGLGFQGEKGEKGDVGLPGPPGPPPSTGILEFMGFPKGKQGEK
GEPGPQGLPGDKGLPGMPGFGGVGEKGEKGVPGLPGGRGLLGLDGSDGIPGRKGHPGIPG
YPGLGGVEGTKGELGDIGPPGPPIVIDREGVVISGAPGDPGNPGIPGPPGDEGISGLPGL
PGAPGFPGLGRDGMGPGGSPGIPGVKGEVGEPGRATIGLPGTPGRDGVPGLPGAPGLPGS
PRPSFPPDAILDGRIGAPGEPGQRGLPGALGPKGYKGEAGDCACDGGVTRPGLKGISGSP
GPSGSPGVPGIKGIGGDPGTVGAPGLRGPPASAGQQGLPGLKGEKGDSSYATGRGARGDR
GATAPRGPSGIPGTPGRDGLPGLPGPPGPPGDGGLGFPGEKGLPGLPGSKGRRGETGSPG
VGYPGASGVRGPPGDPGMDGFPGQAGLPGPPGITLPCIVPGAYGPPGTPGFPGLPGPKGS
KGFPGIPGQPGLRGSKGQPGSPGIMGLQGEPGFPGPRGEQGSQGLPGLDGTDGLPGKMGA
SGLAGTKGAPGDVFGAESGALGERGRPGLPGDKGLTGDPGFPGPKGLDGRPGLLGIKGEQ
GNPGYSGVPGLRGPPGPGGPFGIKGKPGPLGPVGLAGAAGCQGLPGVKGLTGDVGPQGPA
GMKGFPGLDGAPGSPGERGFLGPPGPFGQDGRPGFSGPKGEKGSYGLLGFPGMPGLPGVP
GVNGFKGTPGTAGGKGSPGVVGLQGQKGDRGDIGPPGLPVLGPPEQALQFKGDKGDPGLA
GLGGFPGPRGDKGIPGSRGQPGLPGPIGSASKERGLHGDPGFSGPLGQPGLPGQKGTXXX
XXXXXXXGMPGERGSDGITGTLGFPGPVGVPGPKGDQGESVGVPGIAGGKGERGDPGFPG
ERGREGLKGEPGYPGSTGVNGLKGGPGDLGQEGPAGIPGNAGLRGSPGSPGPPGQPGSVG
FPGARGPAGPKGFHGFPGLNGLNGLPGTKGSPGTPGLSEAGLKGPAGLPGPKGEEGSPGL
GRGPLGFPGPKGSSGDMGPPGPVGLPGLPGTPGASLPSDIRGRPGDAGHPGTDGRSGLPG
PQGPRGPPGPASDQGDTGNPGFPGVLGLRGIKGDVGPTGPIGLPGASGFKGIRGEPGLMG
MPGKDGPPGDPGHPGLKGEMGRRGLPGQQGAPGITPQPEEITAPAGLPGLPGIDGVPGFD
GDPGFQGPAGKP
NT seq 4177 nt   +upstreamnt  +downstreamnt
ggtggaaagaagtcttacagtgggccatgtgggggccgtgattgcagcgctggatgcaaa
tgttttccagagaagggtgcacggggtcgaccaggaccaattgggcttcaaggaccaata
ggtgcacctggacttactggcccagaaggtttgccgggaccaaaaggtgagagaggagca
gtgggcccccctggaccacctggacagaaaggcgacaagggcccaatgggagttccagga
tttcaaggcatcaacgggatcccaggtcaccctgggcaatctggacctagaggtctgcct
ggcctcgatgggtgcaacggtaccactgggagtcctggtgtttctggatcggatggattt
cctggccttcctgggctgcctggtcatcctggcccaaaaggccttaaaggagaacctgtt
tttgctcaaggcagtcttaaaggaatgaagggagaaaatggtcttcctggattggatgga
atttctggcccaaaaggtcttccaggtccgataggttctgcaggccctatagggttacca
ggtttgcagggtccagtgggtccccctgggccaccaggtccaaaaggtaacatgggatta
ggctttcaaggagagaaaggagaaaaaggtgatgtagggctgcctggccctccaggtccc
ccaccatccactggaatactggaattcatgggatttccgaaagggaagcaaggagaaaag
ggtgagccaggccctcaaggactgcctggagacaaaggattgcctggcatgccgggcttt
ggaggtgttggagaaaaaggagaaaaaggtgtgcctggcttaccaggtggcaggggtctt
ttgggactggatggatctgatgggattccagggagaaagggtcatccaggtattccaggc
tatccaggactgggtggagttgaaggcacgaagggtgaattaggtgacatcggtccccca
ggccctcctatcgttattgacagggaaggtgtagtcatttcaggtgccccaggtgaccct
ggaaacccaggaatacctggtcctccaggagatgaagggatcagtggtttaccaggcctt
ccaggagccccagggtttccaggcctggggagagatggaatgggccctggagggtctcca
ggtattccaggtgtgaagggtgaagtgggagaaccaggaagagcaacgattggattacca
ggcactcccggcagagatggtgtaccgggtctgccaggagcaccaggattgcctggttca
ccacgcccttcgttccccccagacgcgatcctggatggaaggattggggccccaggggaa
cctggacaaagaggtctgcctggagctttgggtccaaaggggtacaaaggagaggcaggt
gattgtgcttgtgatggaggagttacaagacctggtctaaaaggcatctcaggttcacca
ggtccatcaggaagccctggtgtgcctgggattaagggcattggtggagacccaggcact
gtgggcgcaccaggactgcgaggccctccggcttcagctggtcagcaaggtcttccaggc
cttaagggagaaaaaggggattcatcctatgcaacaggcagaggtgctcgtggggaccgt
ggtgcaacagcacccagaggaccttcaggcatcccaggaacccctggcagggatggactt
ccaggcttgccaggcccaccaggccctccaggcgatggtgggctaggtttcccaggtgaa
aaaggactgccaggattacctggctccaagggccgtcgtggggaaactggttctcctggc
gttggatatccaggtgccagtggagttcgtgggccaccaggtgacccaggaatggatggg
tttccaggacaagcaggtcttcctggccctccaggtatcaccttgccctgcatagttcct
ggagcgtatgggcccccagggactcccggttttccaggattgccaggtcccaaaggcagc
aaaggctttcctggcattccaggccaacctggattacgtgggtcaaaaggacagccagga
tctccgggaataatgggcttgcagggggaacctggcttccctgggcctcgaggagagcaa
gggtcacaaggacttccgggactggatggaacagatggtttgcctgggaaaatgggtgct
tcaggcttagctggaacgaaaggagctcctggagatgtatttggtgctgagagtggagcc
ctgggagagcgtggccgacctggactcccaggtgataaagggcttacaggtgatcctgga
tttccaggaccaaaagggttagatggaagaccaggcctcctaggtattaaaggcgaacag
ggtaatccaggatattcgggtgtccctggattgcggggacctcctggtcctggaggtcct
tttggcattaagggaaaaccaggacccttggggccagttggccttgcaggagcagcaggc
tgtcaaggacttcctggagtcaaaggcttgactggggatgtaggtccacaaggccctgct
ggtatgaaaggcttcccaggtcttgatggtgctccaggatctcctggggaaagaggattc
ttggggccacctgggccttttggtcaagatggacgtccaggtttctctggcccaaaaggc
gagaaagggtcttatggcctgcttggtttccctggcatgccaggcctgcctggtgtccct
ggggtgaatgggtttaaaggaactcctggcacagctggaggaaaagggagccctggagtt
gtgggactccaaggtcaaaaaggtgacagaggtgatataggtccacctggtcttcctgtt
cttgggcctccagaacaggcactgcaattcaaaggagataaaggagatcctggattagct
gggcttggaggattccctggacctagaggtgataaaggaatcccaggaagccgtggacag
cctggtctccctggtccaattgggtctgcaagcaaagagagaggtcttcatggtgaccca
ggcttttctggtccacttggacagcctgggctgccaggacagaagggtacnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnaggaatgccaggagagaggggttcagatggtatcacagga
acacttggattcccaggacctgttggtgtccctggtccaaagggtgaccagggagagtct
gttggtgttcctggcattgctggaggaaaaggagagcgaggggacccggggttcccagga
gagagagggagagaaggactcaagggtgaaccaggctacccaggaagcactggggtgaat
ggactcaaaggtggcccaggagatcttggccaagaaggaccagcaggaatccctggaaat
gctgggctgagaggaagccctgggtcaccaggacctccagggcagccaggatctgtcgga
ttccctggagctcgtggaccagcaggacctaaagggtttcatggatttccgggtttaaat
ggtctgaatggcttgccaggcacaaaagggtctcctggaacaccaggtctgagtgaagct
ggactgaaaggccctgcaggtctcccaggtccgaagggtgaagaaggttctccaggcttg
ggtagaggacctctaggattccctggaccaaaaggctcatcaggagacatgggtccccct
ggccctgtgggactgcctggcttgccaggaacacctggagcttctcttccttctgatata
cgtgggagacctggggatgctggccatccaggaactgatgggaggtcaggtcttccaggt
cctcaaggaccacgagggccccctggcccagcttctgaccaaggtgacacaggcaatcca
ggtttccctggtgttcttggcttgcgaggcattaagggtgacgtgggacccactggtcca
attggactccctggagcatccggattcaaaggtataagaggggagcctggccttatgggg
atgccaggtaaagatgggcctccgggagatcctggtcaccctgggctgaaaggtgaaatg
ggccgtcgaggtctccctggccaacaaggggctccaggtataaccccacagccagaagaa
atcacagcccctgcaggcttacctggtctgccaggaatcgatggtgtccctggctttgat
ggagatcctggattccagggcccagctggaaaaccag

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