Pelecanus crispus (Dalmatian pelican): 104038888
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Entry
104038888 CDS
T08340
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-6(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Pathway
pcri04510
Focal adhesion
pcri04512
ECM-receptor interaction
pcri04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104038888
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104038888
09142 Cell motility
04820 Cytoskeleton in muscle cells
104038888
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcri04147
]
104038888
00536 Glycosaminoglycan binding proteins [BR:
pcri00536
]
104038888
Exosome [BR:
pcri04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104038888
Glycosaminoglycan binding proteins [BR:
pcri00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104038888
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
104038888
NCBI-ProteinID:
XP_009491681
LinkDB
All DBs
Position
Unknown
AA seq
1392 aa
AA seq
DB search
GGKKSYSGPCGGRDCSAGCKCFPEKGARGRPGPIGLQGPIGAPGLTGPEGLPGPKGERGA
VGPPGPPGQKGDKGPMGVPGFQGINGIPGHPGQSGPRGLPGLDGCNGTTGSPGVSGSDGF
PGLPGLPGHPGPKGLKGEPVFAQGSLKGMKGENGLPGLDGISGPKGLPGPIGSAGPIGLP
GLQGPVGPPGPPGPKGNMGLGFQGEKGEKGDVGLPGPPGPPPSTGILEFMGFPKGKQGEK
GEPGPQGLPGDKGLPGMPGFGGVGEKGEKGVPGLPGGRGLLGLDGSDGIPGRKGHPGIPG
YPGLGGVEGTKGELGDIGPPGPPIVIDREGVVISGAPGDPGNPGIPGPPGDEGISGLPGL
PGAPGFPGLGRDGMGPGGSPGIPGVKGEVGEPGRATIGLPGTPGRDGVPGLPGAPGLPGS
PRPSFPPDAILDGRIGAPGEPGQRGLPGALGPKGYKGEAGDCACDGGVTRPGLKGISGSP
GPSGSPGVPGIKGIGGDPGTVGAPGLRGPPASAGQQGLPGLKGEKGDSSYATGRGARGDR
GATAPRGPSGIPGTPGRDGLPGLPGPPGPPGDGGLGFPGEKGLPGLPGSKGRRGETGSPG
VGYPGASGVRGPPGDPGMDGFPGQAGLPGPPGITLPCIVPGAYGPPGTPGFPGLPGPKGS
KGFPGIPGQPGLRGSKGQPGSPGIMGLQGEPGFPGPRGEQGSQGLPGLDGTDGLPGKMGA
SGLAGTKGAPGDVFGAESGALGERGRPGLPGDKGLTGDPGFPGPKGLDGRPGLLGIKGEQ
GNPGYSGVPGLRGPPGPGGPFGIKGKPGPLGPVGLAGAAGCQGLPGVKGLTGDVGPQGPA
GMKGFPGLDGAPGSPGERGFLGPPGPFGQDGRPGFSGPKGEKGSYGLLGFPGMPGLPGVP
GVNGFKGTPGTAGGKGSPGVVGLQGQKGDRGDIGPPGLPVLGPPEQALQFKGDKGDPGLA
GLGGFPGPRGDKGIPGSRGQPGLPGPIGSASKERGLHGDPGFSGPLGQPGLPGQKGTXXX
XXXXXXXGMPGERGSDGITGTLGFPGPVGVPGPKGDQGESVGVPGIAGGKGERGDPGFPG
ERGREGLKGEPGYPGSTGVNGLKGGPGDLGQEGPAGIPGNAGLRGSPGSPGPPGQPGSVG
FPGARGPAGPKGFHGFPGLNGLNGLPGTKGSPGTPGLSEAGLKGPAGLPGPKGEEGSPGL
GRGPLGFPGPKGSSGDMGPPGPVGLPGLPGTPGASLPSDIRGRPGDAGHPGTDGRSGLPG
PQGPRGPPGPASDQGDTGNPGFPGVLGLRGIKGDVGPTGPIGLPGASGFKGIRGEPGLMG
MPGKDGPPGDPGHPGLKGEMGRRGLPGQQGAPGITPQPEEITAPAGLPGLPGIDGVPGFD
GDPGFQGPAGKP
NT seq
4177 nt
NT seq
+upstream
nt +downstream
nt
ggtggaaagaagtcttacagtgggccatgtgggggccgtgattgcagcgctggatgcaaa
tgttttccagagaagggtgcacggggtcgaccaggaccaattgggcttcaaggaccaata
ggtgcacctggacttactggcccagaaggtttgccgggaccaaaaggtgagagaggagca
gtgggcccccctggaccacctggacagaaaggcgacaagggcccaatgggagttccagga
tttcaaggcatcaacgggatcccaggtcaccctgggcaatctggacctagaggtctgcct
ggcctcgatgggtgcaacggtaccactgggagtcctggtgtttctggatcggatggattt
cctggccttcctgggctgcctggtcatcctggcccaaaaggccttaaaggagaacctgtt
tttgctcaaggcagtcttaaaggaatgaagggagaaaatggtcttcctggattggatgga
atttctggcccaaaaggtcttccaggtccgataggttctgcaggccctatagggttacca
ggtttgcagggtccagtgggtccccctgggccaccaggtccaaaaggtaacatgggatta
ggctttcaaggagagaaaggagaaaaaggtgatgtagggctgcctggccctccaggtccc
ccaccatccactggaatactggaattcatgggatttccgaaagggaagcaaggagaaaag
ggtgagccaggccctcaaggactgcctggagacaaaggattgcctggcatgccgggcttt
ggaggtgttggagaaaaaggagaaaaaggtgtgcctggcttaccaggtggcaggggtctt
ttgggactggatggatctgatgggattccagggagaaagggtcatccaggtattccaggc
tatccaggactgggtggagttgaaggcacgaagggtgaattaggtgacatcggtccccca
ggccctcctatcgttattgacagggaaggtgtagtcatttcaggtgccccaggtgaccct
ggaaacccaggaatacctggtcctccaggagatgaagggatcagtggtttaccaggcctt
ccaggagccccagggtttccaggcctggggagagatggaatgggccctggagggtctcca
ggtattccaggtgtgaagggtgaagtgggagaaccaggaagagcaacgattggattacca
ggcactcccggcagagatggtgtaccgggtctgccaggagcaccaggattgcctggttca
ccacgcccttcgttccccccagacgcgatcctggatggaaggattggggccccaggggaa
cctggacaaagaggtctgcctggagctttgggtccaaaggggtacaaaggagaggcaggt
gattgtgcttgtgatggaggagttacaagacctggtctaaaaggcatctcaggttcacca
ggtccatcaggaagccctggtgtgcctgggattaagggcattggtggagacccaggcact
gtgggcgcaccaggactgcgaggccctccggcttcagctggtcagcaaggtcttccaggc
cttaagggagaaaaaggggattcatcctatgcaacaggcagaggtgctcgtggggaccgt
ggtgcaacagcacccagaggaccttcaggcatcccaggaacccctggcagggatggactt
ccaggcttgccaggcccaccaggccctccaggcgatggtgggctaggtttcccaggtgaa
aaaggactgccaggattacctggctccaagggccgtcgtggggaaactggttctcctggc
gttggatatccaggtgccagtggagttcgtgggccaccaggtgacccaggaatggatggg
tttccaggacaagcaggtcttcctggccctccaggtatcaccttgccctgcatagttcct
ggagcgtatgggcccccagggactcccggttttccaggattgccaggtcccaaaggcagc
aaaggctttcctggcattccaggccaacctggattacgtgggtcaaaaggacagccagga
tctccgggaataatgggcttgcagggggaacctggcttccctgggcctcgaggagagcaa
gggtcacaaggacttccgggactggatggaacagatggtttgcctgggaaaatgggtgct
tcaggcttagctggaacgaaaggagctcctggagatgtatttggtgctgagagtggagcc
ctgggagagcgtggccgacctggactcccaggtgataaagggcttacaggtgatcctgga
tttccaggaccaaaagggttagatggaagaccaggcctcctaggtattaaaggcgaacag
ggtaatccaggatattcgggtgtccctggattgcggggacctcctggtcctggaggtcct
tttggcattaagggaaaaccaggacccttggggccagttggccttgcaggagcagcaggc
tgtcaaggacttcctggagtcaaaggcttgactggggatgtaggtccacaaggccctgct
ggtatgaaaggcttcccaggtcttgatggtgctccaggatctcctggggaaagaggattc
ttggggccacctgggccttttggtcaagatggacgtccaggtttctctggcccaaaaggc
gagaaagggtcttatggcctgcttggtttccctggcatgccaggcctgcctggtgtccct
ggggtgaatgggtttaaaggaactcctggcacagctggaggaaaagggagccctggagtt
gtgggactccaaggtcaaaaaggtgacagaggtgatataggtccacctggtcttcctgtt
cttgggcctccagaacaggcactgcaattcaaaggagataaaggagatcctggattagct
gggcttggaggattccctggacctagaggtgataaaggaatcccaggaagccgtggacag
cctggtctccctggtccaattgggtctgcaagcaaagagagaggtcttcatggtgaccca
ggcttttctggtccacttggacagcctgggctgccaggacagaagggtacnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnaggaatgccaggagagaggggttcagatggtatcacagga
acacttggattcccaggacctgttggtgtccctggtccaaagggtgaccagggagagtct
gttggtgttcctggcattgctggaggaaaaggagagcgaggggacccggggttcccagga
gagagagggagagaaggactcaagggtgaaccaggctacccaggaagcactggggtgaat
ggactcaaaggtggcccaggagatcttggccaagaaggaccagcaggaatccctggaaat
gctgggctgagaggaagccctgggtcaccaggacctccagggcagccaggatctgtcgga
ttccctggagctcgtggaccagcaggacctaaagggtttcatggatttccgggtttaaat
ggtctgaatggcttgccaggcacaaaagggtctcctggaacaccaggtctgagtgaagct
ggactgaaaggccctgcaggtctcccaggtccgaagggtgaagaaggttctccaggcttg
ggtagaggacctctaggattccctggaccaaaaggctcatcaggagacatgggtccccct
ggccctgtgggactgcctggcttgccaggaacacctggagcttctcttccttctgatata
cgtgggagacctggggatgctggccatccaggaactgatgggaggtcaggtcttccaggt
cctcaaggaccacgagggccccctggcccagcttctgaccaaggtgacacaggcaatcca
ggtttccctggtgttcttggcttgcgaggcattaagggtgacgtgggacccactggtcca
attggactccctggagcatccggattcaaaggtataagaggggagcctggccttatgggg
atgccaggtaaagatgggcctccgggagatcctggtcaccctgggctgaaaggtgaaatg
ggccgtcgaggtctccctggccaacaaggggctccaggtataaccccacagccagaagaa
atcacagcccctgcaggcttacctggtctgccaggaatcgatggtgtccctggctttgat
ggagatcctggattccagggcccagctggaaaaccag
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