Pelecanus crispus (Dalmatian pelican): 104038908
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Entry
104038908 CDS
T08340
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcri03016
]
104038908 (TRMT13)
Enzymes [BR:
pcri01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
104038908 (TRMT13)
Transfer RNA biogenesis [BR:
pcri03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
104038908 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-U11-48K
zf-TRM13_CCCH
Methyltransf_32
DUF7077
OrgC
Motif
Other DBs
NCBI-GeneID:
104038908
NCBI-ProteinID:
XP_009491703
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
FVERKKRFCKMIPAPGRRFCGEHGQQEEENDRKRIPCPLDPKHTVYEDQLQKHLKKCNSR
EKPKPVYFVQDINAGSKDVAEIPEKQVPISSLSKEELENLIVKLKKASNGLELRLTEQIL
SHQALQEALNDPKNRESAFKHLKQQASILGNMEKLHLLGPGRCYVEFGAGRGKLSHWVDV
ALQDVENVQFLLVERATTRFKVDGKHKRRDSIFERLQVDIQHLCLNKVPILEKKKLPVVG
IGKHLCGAATDLALRCLVESYTTCCDGEDEEPAPKRSRNDKTEVASNNSADNESNKEDCK
PVAGIVIALCCHHKCDWTHYVGREFFKSVGLGPVEFHYFQRMSSWATCGMRETTTKASAS
EESENQTNDTEEYEQTFSKTESGSDTLQGILTVEERKEIGCLCKRLIDHGRIEYLQQRGY
KAALQYYTESAVSLENVLLTAVPSPSLIPEPTT
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
ttcgtggagaggaagaagcgcttctgcaagatgatcccggctcccgggaggcggttttgc
ggcgagcatgggcagcaggaggaagaaaatgacagaaaaagaattccgtgtcctcttgat
ccaaaacacactgtatatgaagaccaactacaaaagcatttaaaaaaatgtaattcaaga
gagaagccgaagcccgtctactttgttcaagatattaatgcaggttcaaaagatgtagca
gaaataccagaaaaacaagtacctatctcttctctatccaaagaagagctggagaactta
attgtcaagttgaaaaaagcaagtaatggcctggaactccgccttacggaacaaatactg
tcccaccaggctttacaagaagccttaaatgacccaaagaatagggaatccgctttcaaa
cacttgaaacaacaggcttctattttaggtaacatggaaaaattgcatttacttggtcca
ggaagatgttatgttgagtttggagctgggcgaggaaagctgtctcattgggttgatgtt
gccttacaggatgttgaaaatgttcagtttttgcttgtggaaagggcaactacaagattc
aaggtggatggaaaacataaaaggagagattctatatttgaaaggcttcaagttgatatt
caacatttatgtttaaataaggtacctattttggagaagaaaaaactaccagtggtagga
attgggaagcatttgtgtggtgctgcgacagatcttgctttgagatgcttggttgaaagt
tatacaacttgctgtgatggagaagatgaagagcctgcaccaaaacgctccaggaatgat
aagacagaggtggcttctaacaattctgctgataatgaaagcaacaaggaagactgtaag
cctgtagctggaattgttattgcactgtgctgccatcacaagtgtgactggacacactat
gtaggcagggagttctttaaatcagtaggacttggaccagtagaatttcattattttcag
agaatgagtagctgggccacttgtggcatgcgagagaccacaaccaaagcctctgcgagt
gaagaaagtgaaaatcaaactaacgacacagaagaatacgagcaaacatttagcaagaca
gagagtggttctgatactttacaagggatacttactgttgaagaacgaaaggagataggt
tgcctctgtaaacggctgattgatcatggacggattgaatatttacaacaacgaggatac
aaggctgcactacagtattatacagagtctgctgtgtccttggagaatgtcctcttgaca
gctgtcccaagtccatctttgataccagagccaactacatga
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