Pelecanus crispus (Dalmatian pelican): 104039099
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Entry
104039099 CDS
T08340
Name
(RefSeq) protocadherin Fat 4-like
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Laminin_G_2
Laminin_G_1
EGF
Cadherin_2
Fibulin_C
hEGF
EGF_TEN
EGF_CA
Cadherin_4
EGF_3
EGF_2
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
104039099
NCBI-ProteinID:
XP_009491944
LinkDB
All DBs
Position
Unknown
AA seq
2400 aa
AA seq
DB search
SNSQLAFSIASGDSAGQFGIDNSGVLSIRQPLDRESQSFYSLVVQVHDMALLPASRYTST
AQVSIILLDVNDSPPSFISPKLTYVPENTPIDTIVFKAQATDPDSGPNSYIEYSLLRPLG
NKFSIGTIDGEVRLTGELDREAVSNYTLTVVATDKGQPSLSSSTDVVVIVLDINDNNPLF
AQKLYKVEVGENTLTGTDLIQVFATDGDEGTNGQVRYAIVSGDANNEFRIDSVTGVITVA
KPLDREKKPSYTLTVQSADRGSSPRTDTTTVSIILKDVNDYIPTFELSPYSVNVPENLET
LPKVILQVVARDDDQGLNSKLTYVLVSGNEEGAFTLSASGELCLVQSLDREAKEQYVLLI
TAADAGSPALTGTGTIAVTVDDVNDNVPTFAFNVYSATVPEDAPTGTDILLVNSSDADAS
TNAVISYRLTGGNSQFTINPSTGQIITSALLDREARENYTLVVVASDGGFPRALSSSTSV
LVSVADVNDNPPKFQHHPYVTHVPSPTTSGSFVFAVTVTDADAGSNAELHYSLMGKNSEK
FHIDPARGAILAANLLAGESEVTISVHVRDGGRYPKTDSTTVTVRFVNRAEFPRVQADQE
TFTFPENQAVGTLVTTVSGTSARGGSLSYYIASGNLGSTFLVDQVTGQLSVGRAFDFEAI
QKYVVWIEARDTGFPPFSSYKKLEVTVIDVNDNAPEFEQDPFIAEIVENLSPRKILTVAA
VDRDSGLNGEVNYEIIEGNTENSFSINRATGEIRSVRPLDREKLSRYTLTIKASDKGTPL
QSTTVKVIINILDENDNAPRFSQIFSASVPENAPLGFTVSRVTTSDEDIGVNAVSRYSIR
DTSLPFTINPSTGDITISRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRF
TKPSYYLECPELPGIGLKVTQVSATDPDEGSNGQVFYFIKSQSEFFRINATTGEIFNKQY
LRYQNSSGSSNVNINRHSFIVTSSDRGSPPLMSETTVTINIVDSNDNAPLFLTHKYFTPV
TKNVRVGTNLIKVTAVDDKDFGLNSEVEYFISDESKTNKFRLDRSTGWISVSSSLMADLN
KNFLFKVKAKDKGNPPLSSEVAVEIVVTEENYHTPEFSQSRMSVTIPESHSVGTVVRTVS
ARDRDAAMNGLITYNISSGNEAGVFAINTTTGTLTLAKPLDFELCQKHELVVTATDGGWV
SRTGYCSVTVNVIDVNDNSPAFSPEDYFPNVLENAPSGTTVIRLNATDADSGPNAVIAYA
IQSSDSDLFVIDPNTGTITTQGFLDYETKQSYHLTVKAFNVPDEERCSFASVNIQLEGTN
EYVPRFVSKLYYFEVSEAASKGTVVGEVFASDRDMGTDGEVHYLIFGNSRKKGFQIDEKS
GQIYVSGPLDREKEERVSLKVLAKNFGSIRGADIDEVTVNITILDANDPPVFTLGTYNIR
ISEGVPPGTHVTFVSAFDSDSVPSWSRFSYFIGSGNNNSAFSINPQTGQVTVTAELDRET
LPVYNLSVLAIDSGTPSATGSASLLVTLEDINDNGPTLSTSQGEVMENNRAGTLVMTLQS
SDPDLPPNQGPFTYYLLSTGPATSYFSLSTAGVLTTTREIDREQISDFYLSVVTRDSGVP
QMSSTGTVQIKVIDQNDNPSQPRTVEIFVHYYGNLFPGGILGNVKPQDPDVLDSFQCSLT
SGVTSLFSIPGGTCELHSQARSTDGTFDLAVLSNDGLHGAVTSSIRIFFTGFGNATIDNS
ILLRLSTHSVRDFLTNHYLHFLRIASSQLTGLGTAIQLYGLYEESNHTFLMAAVKRGNNQ
YVNPSGVATFFESIKDVLFRQSGVRIEAVDHDWCLQSPCQNGGSCLRRLAVGPALKSHES
VPVIIVANEPLRPFVCRCMPGYDGSLCEMDIDECLPSPCHNDGTCHNLVGGFSCSCPEGF
TGMACERDVNECLSNPCKNGAACQNFPGSFNCVCKTGYTGKTCDATVNYCECNPCFNGGS
CQSGVEGYYCHCPFGVFGNHCELNSYGFEELSYMEFPSMDPNNNYIYIKFATIKSNALML
YNYDNQTGERAEFLALEIAEERLRFSYNLGSGTYKLTTTKKVSDGQFHTVIARRAGMAAS
LTVDSCSEDQEPGYCTVSNVAVSTDWTLDVQPNRVTVGGIRSVEPILQRRGQVESHDFVG
CIMEFAVNGRPLEPSQALAAQGILDRCPRLEGACTTSPCQHGGTCVDHWSWQQCHCNDGL
TGKHCEKYITADTALSLEGKGRLDYHMSPNKKREYMMRHGTRGAGPGPLNADRLEVKFRT
RSENGVLVHVQESSNFTTVKIKGGKVHYVSDAGIAGKVERNIPEVYAADGQWHSVLIEKN
GSATILSVDKTHSRDILHATQDFGGLNVLTISLGGIPSSQPFKSTVAGFDGCISYIKYGG
NT seq
7203 nt
NT seq
+upstream
nt +downstream
nt
gctccaactcacagctggccttcagcattgcgtccggggacagcgcggggcagttcggca
ttgacaacagcggggtgctgagcatcaggcagcctttggaccgggaaagccagtctttct
acagccttgtcgtgcaagtccacgacatggcccttctcccggcctccaggtacacaagca
cagcccaagtttcaattattctgctggatgtgaacgacagccctccaagctttatctctc
cgaagctgacctacgtcccggaaaacacgccgatagatacgattgtgttcaaagcgcagg
cgaccgatcccgacagcggtccaaacagctacatcgaatatagtctgctccggcctctgg
gaaacaaattcagcattggcactattgacggtgaagtgaggcttaccggagagctcgaca
gagaagccgtgtccaactacaccttgactgtggtagccacagacaagggccagccatcgc
tttcttcgtctacagatgtggtggtcatagtcctggacattaatgacaataacccgcttt
ttgcccaaaaactttataaagtagaggtgggggaaaatactttgacagggacagatttaa
tccaggtgtttgctacggatggagatgaaggtacaaacgggcaggtccgctatgccattg
tgagcggagatgccaataatgagtttcggattgattctgtgacaggggtgataacagttg
ccaagcctttggacagagagaaaaagccctcctatacattgaccgttcagtcagccgacc
gcgggagcagcccgaggaccgataccacaacagtcagtattattctgaaggatgtcaatg
attatattcccacatttgaactttctccctactctgtcaacgtccctgagaatttagaga
cgctcccaaaagttattcttcaggttgtagcaagggacgatgatcaaggcctaaacagca
agcttacttatgtgctggtgtctggaaatgaagaaggagcctttactctctcggccagcg
gagagctgtgcttggtgcagagcctggaccgggaggcaaaggagcagtacgtactactga
tcacagctgctgatgcagggtctcctgccctcactggcactggaaccattgctgtcacag
tggatgatgtcaatgacaatgtccccacattcgcctttaacgtgtattctgccactgttc
cagaggatgcacctacggggacagatattttgcttgtaaactcctcagatgctgacgctt
ctacaaatgctgttattagctataggcttacgggtggcaattctcaattcacaatcaacc
catcaacgggacaaatcatcaccagtgctctcctcgatcgagaggcaagggagaactaca
ctttggtggtggtggcgagtgatgggggcttccccagggctctctccagttccaccagcg
tgctcgtctctgttgccgacgtgaatgacaacccgcccaagtttcaacaccatccctacg
tcacccacgtcccatcacctaccacttcaggctcgtttgtgtttgctgtgactgtcaccg
atgcagatgctggctccaatgctgagctccattattccctcatggggaaaaactccgaga
aattccacatcgacccagcaaggggggcaatcctggctgcaaacctgctggcaggagagt
ctgaagtcaccatctctgttcatgtgagggatggaggccggtaccccaagacagactcta
caactgtcaccgtgaggtttgtgaacagagcagaatttcctcgcgttcaggcggatcagg
agaccttcacgtttcctgaaaaccaagcagtcggtacgcttgtcaccactgtctccggga
cttcagccagaggaggctccttgtcttactacattgctagtggtaacctgggcagcacct
tcctggtcgaccaggtgacaggacagctttctgtcgggcgggctttcgatttcgaagcca
tacagaaatacgtggtttggattgaggccagagatacgggctttcctcccttttcctcat
ataagaaactggaagtaacggtgatagatgtcaatgataacgcgccagagtttgagcaag
accccttcattgcagaaatagtggagaacctgtccccacggaagatactgacggtggctg
ctgttgacagggacagtggtctaaatggagaggtaaattatgaaataattgagggcaata
cagaaaatagtttcagtatcaatcgagccactggtgagatcagaagtgtcagacccttgg
acagggagaaattgtctcgatacacactaaccataaaagcttcagataaaggcaccccgc
tccagagcacgacggttaaagttatcattaatattttagatgaaaatgacaatgctccaa
ggttttcccagatattcagtgcttctgtgcctgaaaatgcacctctgggttttacggtaa
gccgagtcacgacatcagatgaagacattggggtgaacgcagtcagcaggtactccataa
gggatacaagtctcccgttcaccataaatcccagcactggggacatcaccatcagcagac
cactaaacagggaggacacagaccgctacagaatcagggtctctgcgcatgactccgggt
ggacagtgagcacggatgtcaccatatttgtcacagatgtcaacgacaatgccccacgat
ttacaaagccatcctattacctggagtgtcccgaacttcctgggattgggttgaaggtca
cccaggtttcagccaccgatcccgatgaagggtcgaatggccaagtcttctacttcataa
aatcccagtccgagttcttccgaattaatgcaaccacaggggaaattttcaacaagcagt
atttaaggtaccaaaactccagcggttcaagcaatgtcaacattaataggcacagcttca
tcgttacttcttcagaccgaggcagtcctccgttaatgagcgagacaacggtcaccatta
acatagtagacagcaacgacaacgcgccgctgttcctcactcataaatactttactcctg
ttactaagaacgtgagagttggcacaaacttaattaaagttactgcagtggatgacaaag
actttggcttgaattctgaagtggagtactttatctctgatgaaagcaaaactaataaat
tcaggctggacaggagtacaggctggatttctgtgtcatcttcactaatggctgatttga
acaaaaacttcctctttaaagtgaaagcaaaggataaaggtaatcctccactctcatccg
aggtagctgttgaaatagtagtaacagaggaaaattaccatacgcctgagttttctcaaa
gccgcatgagcgttactatcccggagagtcactctgttggaacagtggtcaggacggttt
cagcccgagacagagatgccgctatgaacggactaatcacatataatatttcctctggga
atgaggctggcgtctttgctattaatacaactaccggtacgctgacactagcaaaaccac
tcgattttgagttatgccaaaagcatgagctcgttgttactgccacggatggaggatggg
tgtccagaacaggctactgcagtgtcactgtaaatgtcattgatgtgaatgataattctc
cagcattcagccctgaggactactttcccaacgtgttagaaaatgcccccagtgggacaa
ctgttattcgtttaaatgccactgatgctgactctggacctaacgctgtgattgcatatg
ctattcagtcctcagatagtgacctctttgtcattgatcccaatacaggaacgatcacca
cccagggatttttagattatgaaacaaagcaaagttaccatttaacagtaaaggctttta
atgttccggatgaagagaggtgcagctttgctagtgtcaacatccagttagaagggacaa
atgaatatgtgcctcgttttgtgtccaagctttattattttgaggtttctgaggcagcct
ccaaaggtactgttgtaggtgaagtttttgcaagtgatcgtgatatgggaactgatggag
aagtccactaccttatctttggcaacagcagaaagaaaggcttccagatagatgagaaaa
gtggccagatctatgtttcaggacctctcgacagagaaaaagaagaacgcgtctctttga
aagtccttgcaaaaaattttgggagcattcgtggtgcagatatagatgaagtaactgtta
atatcactatactggatgccaatgatcctcccgtttttaccttgggaacctacaatatac
gaatcagtgagggtgttcctccaggcacccatgtcacgttcgtgagtgcctttgattcag
attctgtccctagctggagcaggttttcctatttcattgggtctggcaacaacaacagtg
ccttttccatcaatccccagacaggacaggtgacggtcactgcagagctggatcgagaaa
cgttgcctgtgtacaacctgtctgtgctggccatcgattcgggaacgccatctgctacag
gaagtgcctctttattggtaactttggaagatatcaacgacaacggccctactttgtcca
ccagccaaggagaagtcatggagaataaccgtgcgggaacgcttgtgatgacgcttcaat
cgtcagatcctgatctccctccgaaccaaggtccctttacatattacttgctcagcactg
gtcccgcaactagctacttcagccttagcaccgctggcgtgctgacaacgacaagagaga
tcgacagggagcaaatcagcgatttctacctgtcggtggttacgagagactctggcgttc
ctcaaatgtcttccacaggaactgtgcagatcaaggtaatagaccaaaacgacaacccgt
ctcagcccagaacggtagaaatctttgttcactattatggcaacctcttcccaggtggaa
ttttgggcaacgtaaagccgcaagatccagatgtgctagacagcttccagtgctccctca
cctcaggagtcaccagcctcttcagcattcctgggggtacctgtgagctgcactcgcagg
caaggtccacggatggcacatttgacctggctgtcctcagcaacgatgggctgcatggtg
ccgtcacgagcagcatccgcattttcttcacgggcttcggcaatgccaccattgacaaca
gcatcctcctccgcctgagcacccacagcgtgcgggatttcctgacgaatcactatctcc
acttcttacgcatcgctagctcccagctgaccgggctgggcaccgccatccagctctacg
ggctgtatgaggagagcaaccacaccttcctgatggcagccgtcaaacgcggcaacaacc
agtacgtgaatcccagcggcgtggccaccttctttgagagcatcaaagatgtcctcttcc
gccagagcggggtgcggatcgaggctgtggaccacgactggtgcctgcagagcccctgcc
agaacggagggagctgcctgcggaggttggcagtgggcccggctctgaagagccacgaga
gcgtccccgtcatcatcgtggccaacgagcccctccggcccttcgtgtgcaggtgcatgc
cagggtacgatgggagtctgtgcgagatggacatcgacgaatgcctcccttccccctgcc
acaacgacgggacttgccacaacttggtggggggcttctcctgcagttgcccagagggct
tcactggcatggcctgcgagagggacgtcaacgagtgcctttccaacccatgcaaaaacg
gtgctgcctgccagaacttcccaggaagcttcaactgcgtttgtaaaaccgggtatacag
ggaaaacgtgcgacgccactgtcaattactgcgagtgcaacccctgtttcaatggtggat
cctgccaaagcggggtggagggctactactgccactgccccttcggtgtttttgggaatc
attgtgaactgaacagttatggatttgaagagttgtcatatatggagtttcccagtatgg
atccaaacaataattacatctatataaagtttgccactataaaaagtaatgccttaatgt
tgtataactacgataaccaaaccggagaacgggcagaatttctggccctggaaatagcag
aagagaggctgagattctcctacaatcttggcagtggcacatacaagcttaccacaacta
agaaggtgtctgatggacaatttcacacagttattgcccggagggctggaatggcagcgt
cactgacggtggattcctgctctgaggatcaggagccaggctactgcactgttagtaatg
ttgctgtttctactgactggactctcgatgtacaaccaaatcgagttactgttggtggca
tcaggtctgtagagcccatccttcaaaggagaggacaggtggaaagccatgattttgtgg
gctgtataatggagttcgcagtcaatggacgtcccctggagcccagccaggctttggcag
cgcaaggaatcttagatcgatgccccagactagaaggcgcttgcacgaccagcccctgcc
aacatggtggcacctgtgttgatcactggtcgtggcagcagtgtcactgcaatgatggac
tgacgggaaagcactgtgagaaatatattactgctgacactgccttatcgctagaaggca
aaggacgacttgactaccacatgagcccaaacaagaagcgagaatacatgatgagacacg
gcactcgaggcgccggcccaggacccttgaacgcggaccgcttggaagtgaagttcagga
caagaagtgagaacggcgttttagttcacgtccaggaaagcagcaacttcactactgtga
agataaaaggtgggaaagtgcattacgtatcggatgctggaattgctgggaaagtggaaa
gaaatatcccagaagtgtacgctgcggatggtcagtggcattcggtactcattgagaaga
acgggtctgctactatcctgtcggtcgacaagactcatagccgagacattctccacgcca
cgcaagactttggtggtctaaacgttcttacaatttctttgggaggaatcccatcgagcc
aacctttcaagagcacagttgcaggcttcgatggctgcatttcctacatcaagtacggcg
ggg
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integrated database retrieval system