Pseudorca crassidens (false killer whale): 137201821
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Entry
137201821 CDS
T12027
Symbol
ARID2
Name
(RefSeq) AT-rich interactive domain-containing protein 2 isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
pcrs Pseudorca crassidens (false killer whale)
Pathway
pcrs03082
ATP-dependent chromatin remodeling
pcrs05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pcrs00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137201821 (ARID2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
137201821 (ARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcrs03000
]
137201821 (ARID2)
03021 Transcription machinery [BR:
pcrs03021
]
137201821 (ARID2)
03036 Chromosome and associated proteins [BR:
pcrs03036
]
137201821 (ARID2)
Transcription factors [BR:
pcrs03000
]
Eukaryotic type
Helix-turn-helix
ARID
137201821 (ARID2)
Transcription machinery [BR:
pcrs03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
137201821 (ARID2)
Chromosome and associated proteins [BR:
pcrs03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
137201821 (ARID2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
137201821
NCBI-ProteinID:
XP_067552385
LinkDB
All DBs
Position
11:40223901..40394528
Genome browser
AA seq
1836 aa
AA seq
DB search
MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGF
AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKEKTDRDFVKFWKDI
VDDNEVRDLISDRNKSHEGTSGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLE
VLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLVEHPSSSHQILSE
IRPQAVEQVQTQTHVASAPASRAVVAQHVAPPPGIVEIDSEKFACQWLNAHFEVNPDCSV
SRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDSSNNGQAHIHVVGVK
RRAIPLPIQMYYQQQPVSTPVVRVDSVPDVSPSPSPAGIPHGPQTVGNHFQRTPVTNQSS
SLTATQMSFPVQGVHTVAQTVSRIPPNPSVHTHQQQNAPVTVIQNKAPIPCEVVKATVIQ
NSIPQTAVPVSIAVGGGAAQSSVVQNHSTGPQPVTVVNSQTLLHHPSVIPQQSPLHTVVP
GQIPSGTPVTVIQQGVPQSHIFGRVQNMPACTSAVSQGQQLITTSPQPVQTSSQQTSAGG
QPQDTVLIAPPQYVTTSASNIVSATSVQNFQVATGQMVTIAGVPSPQPSRVGFQNIAPKP
LPSQQVSSTVVQQPIQQPQQPTQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPAGQAV
QLAGQPNITPSSSPSPVPATNSQVPSAVSSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPA
PPPQQVQVQVQQPQQVQMQVQPQQTNAGVGQPASGESSLIKQLLLPKRGPSTPGGKLILP
APQIPPPNNARAPSPQVVYQVANNQAAGFGVQGQTPAQQLLVGQQNVQLVQSAMPPTGGV
QTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFATATVSQGNATQLIAPAG
ITMSGTQAGVGLQVQTLPASQASPAGQSSCTTATPPFKGDKIICQKEEEAKEATGLHVHE
RKIEVMENPSCRRGTTNTSNGDTKENEMQVGSLLNGRKYSDSSLPPSNSGKIQSEANQCS
LISNGPSLELGENGASGKQNSEQMDMQDIKSDLKKPLVNGICDFDKGDGSHLSKNIPNHK
TSNHVGNGEISPVEPQGTFDATQQDTAKGDQLERISNGPVLTLGGSPSVSSIQEASNVAT
QQFSGTDLPNGPLASSLNSDVPQQRPSVVVSPHSTTSVIQGHQIIAVPHSGSRVSHFPAL
SSDVRSTNGTAECKTVKRPAEDNDRETVTGIPNKVGVRIVTISDPNNAGCSATMVAVPAG
ADPSTVAKVAIESAVQQKQQHPSTYVQNVVPQNTPMTPSPAVQVQSQPNSSQPSPFSASS
QHGDPVRKPGHNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQR
FSFITHLQDKHCSKDALLAGLKQDEPGQAGSQKSSIKQPAVGGTSSTPRAQKAIVNHPSA
ALMALRRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSV
LAISNMEASSTLAKCLYELNFTVQSKEQEKDSEMLQ
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactcgacggggaaggcgcctccggacgagcggagaaagggactcgctttcctg
gacgagctgcggcagttccaccacagcagagggtcgccttttaaaaaaatccctgcggtg
ggtgggaaggagctggatcttcacggtctctacaccagagtcactactttaggcggattt
gcgaaggtttctgagaagaatcagtggggagaaattgttgaagagttcaactttcccaga
agttgttctaacgctgcctttgctttaaaacagtattacttgcgttacctagaaaagtac
gagaaagttcatcattttggggaggatgatgatgaggtaccaccaggcaatcccaaacca
cagcttcctattggtgcaattccatcttcctacaattaccagcaacacagtgtgtcagat
tatctgcgtcaaagttatgggctgtctatggacttcaattcgccaaatgattataataaa
ttggtgctttcactattatctggactcccaaatgaagtggactttgctattaatgtatgc
actctcctatcaaatgaaagcaaacatgtcatgcaacttgaaaaagaccctaaaatcatc
actttattgcttgctaatgccggggtgtttgatgacactttaggatccttttctactgta
tttggagaagaatggaaggagaagactgatagagattttgttaagttttggaaagacatt
gttgatgataatgaagtacgtgacctcatttctgacagaaacaagtctcatgaaggtaca
tcaggagaatggatttgggaatctttatttcatccacctcgaaagctgggcattaatgat
attgaaggacaacgggtacttcagattgcagtgattttgcgaaatctttcctttgaggag
ggcaatgttaagctcttggcagctaatcgtacctgtctccgtttcctattactttctgca
catagtcattttatttctctaaggcaattaggccttgacacattaggaaatattgcagct
gagcttttattggatcctgttgatttcaaaactactcatctgatgtttcatactgttaca
aaatgcctgatgtcaagggatagatttttaaagatgaggggcatggaaattttgggaaat
ctttgcaaagcagaggataatggtgttttgatttgtgaatatgtcgatcaggactcatac
agagagatcatttgtcatctcactttacctgatgtgctgctcgtaatctcaacacttgag
gtgctatatatgctcacagaaatgggagatgtagcttgcacaaaaattgcaaaagtagaa
aagagcatagacatgttagtgtgtctggtttccatggatattcagatgtttggccccgat
gcactggctgcagtaaaactcgtcgaacatccaagttccagtcatcaaattttatctgaa
attaggccacaagctgtagagcaagtccaaacccagacccatgtagcatctgccccagct
tccagagcagttgtagcacagcatgttgctccacctccaggaatagtggaaatagatagt
gagaagtttgcttgtcagtggttaaatgctcattttgaagtaaatccagattgttctgtc
tctcgagcagaaatgtattctgagtacctatcaacttgcagtaaattggctcgtggtgga
atcctaacatcaactggattttataaatgtcttagaacggtctttccaaatcatacagtg
aagagggtggaggattccagtaacaatgggcaggcacatattcatgtagtaggagtaaaa
aggagggctatcccacttcccattcagatgtactatcagcagcaacctgtttctactccc
gttgttcgtgttgattctgttcctgatgtatctccaagtccttcacccgcaggaatccct
cacggaccacaaactgtaggaaaccattttcagaggactcctgttaccaaccaatcttca
agtttgactgcaacacaaatgtcttttccagtacaaggtgttcataccgtggcacagact
gtttcgagaattccaccaaatccttcagttcatacccaccagcagcaaaatgctccggtg
actgtcattcagaataaagctccaattccttgtgaagtcgttaaggctacagtaatccag
aattctataccccagacagcagttcctgttagtattgctgtgggaggaggagctgctcag
agttctgtggttcagaatcatagtacagggccccaacctgttacagttgtgaattcccag
acattgcttcaccatccatctgtaattccacaacagtctccattgcacacagtggtaccg
ggacagataccttccggcactcctgttacggtaattcaacaaggtgtcccacagagtcat
atatttggcagagtacagaacatgccagcatgtacttctgcagtttcacagggtcaacag
ttaatcaccacatcaccccaacccgtgcagacttcgtctcagcagacgtcagctggcggt
cagccacaggacactgttctcatagcacccccacagtacgtaacgacttctgcgtccaac
attgtctcggcaacttcagtacagaattttcaggtagctacaggacaaatggttaccatt
gctggtgtcccgagtccacagccctcaagggtagggtttcagaacattgcacccaaacct
ctcccttctcagcaagtttcatcaacggtggtccaacagcctattcaacaaccacagcag
ccaacccaacaaagcgtagtgattgtaagtcagccagctcaacaaggtcaaacttacgca
ccagccattcaccaaattgttcttgctaatccagcagctcttccggctggtcaggcagtt
cagctagctggacaaccaaacattactccatcttcctcaccatcacctgtcccagctact
aatagccaggtcccttctgccgtgtcatcttcttccacccctcagtcacagggaccacct
cctactgtcagtcaaatgctatctgtgaaaaggcagcaacagcagcagcattcaccagca
cccccaccacaacaggtacaagtacaagttcagcagccacaacaagtacaaatgcaggtt
caaccacagcaaacaaatgcaggagttggtcagcctgcttctggtgagtcgagtctgata
aaacagttgctgcttccaaagcgtggtccttcaactccgggtggtaagcttattctccca
gctccacagattcctccccctaataatgcaagagctcctagccctcaggtggtataccag
gtggccaataatcaagcagcaggttttggagtgcaggggcaaactccagctcagcagcta
ttggttgggcagcaaaatgttcagttggtccaaagtgcgatgccacccacagggggagtg
caaaccgtgcccatctcgaacttacaaatattgccaggtccgctgatctcaaatagccca
gcaaccattttccaagggacttctggcaaccaggtaactataacagttgtgccaaataca
agttttgcaactgcaactgtgagtcagggaaatgcaactcagctcattgctccagcagga
attaccatgagcgggacccaggcaggagttggacttcaggtgcaaacgcttccagcctct
caagcatctccagctggacaatcatcttgtactactgctactcccccattcaaaggtgat
aaaataatttgccaaaaggaagaggaagcaaaagaagcaacaggtttacacgttcatgaa
cgtaaaattgaagtcatggagaacccatcctgcagacgaggaaccacgaacaccagcaat
ggggatacgaaggaaaatgaaatgcaggtgggaagtcttttaaatgggagaaagtacagt
gactcaagtctacctccttcaaactcagggaaaattcaaagtgaggctaatcagtgctca
ctaatcagtaatgggccatcattagaattaggtgagaatggagcatctggaaaacagaac
tcagaacaaatggacatgcaggatattaaaagtgatttgaaaaaacctctagttaatgga
atctgtgattttgataaaggagatggttctcatttaagcaaaaacattccaaatcacaaa
acttccaatcatgtaggaaatggtgagatatctccagtggaaccacaagggactttcgat
gccactcagcaagatactgccaaaggtgatcaactagaaagaatttctaatggacctgta
ttaactttgggtggttcgccatctgtgagcagtatacaggaggcttcaaatgtggcaaca
cagcaatttagtggtactgatttgcctaatggacctctagcttcaagtttgaattcagat
gtgcctcagcaacgcccaagtgtagttgtctcaccacattctacaacctctgttatacag
gggcatcaaatcatagccgttccccactcaggatcaagagtgtcccattttcctgccctg
tcatctgacgttcggtctacaaatggcacagcagaatgcaaaactgtgaagaggccagca
gaggataatgatagggaaacagtcacaggaattccaaataaagtgggagttagaattgtt
acaatcagtgaccccaacaatgctggctgcagtgcaacaatggttgccgtgccagcagga
gcagatccaagcactgtagctaaagtagcaatagaaagtgctgttcagcaaaagcagcag
cacccatcaacctacgtacagaatgtggtcccacagaacactcctatgacaccttcacca
gctgttcaagtacagagccagcctaacagttctcagccttctccattcagtgcatctagt
caacatggagatccagtgagaaaacctgggcacaacttcatgtgtctgtggcaatcttgt
aaaaagtggtttcagaccccctcacaggttttctaccatgcagcaactgaacatggaggg
aaggacgtatatccagggcagtgtctttgggaaggttgtgagccttttcagcgacagagg
ttttctttcattacccacttacaggacaaacactgttcaaaggatgccctgcttgcagga
ttaaaacaagacgaaccaggacaagcaggaagtcagaaatcttctatcaagcagccggct
gtagggggcacaagctcaactcctagagcacaaaaggccattgtgaatcatcccagtgct
gcccttatggctcttaggagaggatcaagaaaccttgtctttcgagattttacagatgaa
aaagagggaccaataactaaacacatccgactaacagctgccttaatattaaaaaatatt
ggtaaatattcagaatgtggtcgcagattgttaaagagacatgaaaacaacttatcagtg
ctagccattagtaacatggaagcttcctccacccttgccaaatgcctttatgaacttaat
tttacagttcagagtaaagaacaagaaaaagactcagaaatgctgcagtga
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integrated database retrieval system
