Pseudorca crassidens (false killer whale): 137201923
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Entry
137201923 CDS
T12027
Symbol
SCN8A
Name
(RefSeq) sodium channel protein type 8 subunit alpha isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
pcrs Pseudorca crassidens (false killer whale)
Pathway
pcrs04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pcrs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
137201923 (SCN8A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcrs04040
]
137201923 (SCN8A)
Ion channels [BR:
pcrs04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
137201923 (SCN8A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
IQ
GPHH
Lustrin_cystein
HB_ELP1
Mucin_bdg
Motif
Other DBs
NCBI-GeneID:
137201923
NCBI-ProteinID:
XP_067552683
LinkDB
All DBs
Position
11:44937593..45115404
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AA seq
1991 aa
AA seq
DB search
MAARLLAPPGPDSFKPFTPESLANIERRIAESKLKKPPKADGSHREDDEDSKPKPNSDLE
AGKSLPFIYGDIPQGLVAVPLEDFDPYYLTQKTFVVLNRGKTLFRFSATPALYILSPFNL
IRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTFESLVKIIAR
GFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVVWPINFNESYLENGTKGF
DWDEYINNKTNFYTVPGMLEPLLCGNSSDAGQCPEGYQCMKAGRNPNYGYTSFDTFSWAF
LALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMATSAGTVSEDAIEEEGEEGAGSPRSSSEI
SKLSSKSAKERRNRRKKRKQKELSEGEEKGDPEKVFKSESEDGMRRKGFRLPDNRIGRKF
SIMNQSLLSIPGSPFLSRHNSKSSIFSFRGPGRFRDPGSENEFADDEHSTVEESEGRRDS
LFIPIRARERRSSYSGYSGYSQGSRSSRIFPSLRRSVKRNSTVDCNGVVSLIGGPGSHIS
GRLLPEVKIDKAATDDSATTEVEIKKKGPGSLLVSMDQLASYGRKDRINSILSVVTNTLV
EELEESQRKCPPCWYKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLF
MAMEHHPMTPQFEHVLTVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSL
MELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIF
AVVGMQLFGKSYKECVCKINQDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAG
QAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGVA
WTKLKVRAFMQAHFKQREADEVKPLDELYEKKANCIANHTGADIHRNGDFQKNGNGTTSG
IGSSVEKYIIDEDHMSFINNPNLTVRVPIAVGESDFENLNTEDVSSESDPEGSKDKLDDT
SSSEGSTIDIKPEVEEVPVEQPEEYLDPDACFTEGCVQRFKCCQVNIEEGLGKSWWILRK
TCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLL
KWIAYGFVKFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSR
FEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNESSEIRFEIED
VNNKTECEKLMEGNNTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKPD
EQPKYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYY
NAMKKLGSKKPQKPIPRPLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQ
MENILYWINLVFVIFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKY
FVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFG
MSNFAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCSLDKEHPG
SGFKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFY
EIWEKFDPDATQFIEYSKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILF
AFTKRVLGDSGELDILRQQMEERFVASNPSKMSYEPITTTLRRKQEEVSAVVLQRAYRGH
LARRGFVCKKTTSNKLENGGAHREKKESTPSTASLPSYDSVTKPEKEKQQRAEEGRRERA
RRQKEVRESKC
NT seq
5976 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcggctgctcgcaccaccaggccctgatagtttcaagcctttcacccctgag
tcactggcaaacattgagaggcgcattgccgagagcaagctcaagaaaccgccaaaggcc
gatggcagtcatcgggaagatgatgaggacagcaagcccaagccaaacagtgacctggaa
gcagggaagagtttgcctttcatctatggggacatcccccaaggcctggttgcggttccc
ctggaggactttgacccatactatttgacgcagaaaacctttgtagtattaaacagaggg
aaaactctcttcagatttagtgccacgcctgccttgtacattttaagtccttttaacctg
atacgaagaatagctattaaaattttgatacattcagtgtttagcatgatcattatgtgc
actattttgaccaactgtgtattcatgacttttagtaaccctcctgaatggtcgaagaat
gtggagtacacgttcacagggatttatacatttgaatcgctagtgaaaatcattgcaaga
ggtttctgcatagatggctttacctttttacgggatccgtggaactggttagatttcagt
gtcatcatgatggcatatgtgacagagtttgtggacctgggcaatgtctcagcgctgaga
acattcagggttctgcgagctttgaaaactatctctgtaattccaggcctgaagactatc
gtgggcgccctgattcagtccgtgaagaagctgtcggatgtgatgatcctgacagtgttc
tgcctgagtgtctttgccttgatcggactgcagctcttcatgggaaacctgcgaaacaag
tgtgtggtgtggcccataaacttcaacgagagctatcttgaaaatggcaccaagggcttt
gactgggacgagtacatcaacaataaaacaaatttttacacagttcctggcatgctggaa
cctttgctctgtgggaacagttctgatgctgggcaatgcccagagggataccagtgtatg
aaagcaggaaggaaccccaactatggttacacaagctttgacacttttagctgggccttc
ttggcattgtttcgccttatgacccaggactactgggagaacttgtatcaattaacctta
agagcagctgggaaaacgtacatgatcttcttcgtcttggtcatctttgtgggttctttc
tatctggtgaacttgatcttggctgtggtggccatggcttatgaagaacagaatcaggca
acactggaggaagcagagcagaaagaggctgaattcaaagcaatgttggagcaacttaag
aagcaacaggaagaggcacaggcggcggcgatggccacttcagcaggaactgtctcagaa
gatgccatagaggaagaaggtgaagaaggggcaggctcgccccgaagctcatctgaaatc
tctaagctcagttccaagagtgccaaagagagacgtaacaggagaaagaagaggaaacaa
aaggagctctctgaaggagaagagaaaggggatcccgagaaggtgttcaagtcagagtca
gaagatggtatgaggaggaagggctttcggctaccagacaacagaattgggaggaaattt
tccatcatgaatcagtcactgctcagcattccgggctccccattcctgtcccgccacaac
agcaaaagcagcatcttcagcttcagggggcctgggcggttccgggacccgggctccgag
aacgagtttgcggacgacgagcacagcacggtggaggagagcgagggccgccgggactcg
ctcttcatccccatccgagcccgcgagcgccgcagcagctacagcggctacagcggctac
agccagggcagccgctcctcgcgcatattccccagcctgcggcgcagcgtcaagcgcaac
agcacggtggactgcaacggtgtggtgtccctcatcggcggccccggctcccacatcagc
gggcgtctcctgccagaggtgaaaatagataaggcagctactgatgacagtgctacaacc
gaggtggaaattaagaagaaaggccctggatctctcttagtttccatggaccaattggcc
tcctatgggcggaaggacaggatcaacagtatattgagcgttgttacaaatacactggta
gaagagctggaagagtctcagagaaagtgcccgccgtgctggtataaatttgccaacact
ttcctcatctgggagtgtcacccctactggataaagctgaaagagattgtaaacttgatc
gtcatggacccttttgtggacttggccatcaccatctgcatcgtcctgaacacgctgttt
atggcaatggagcaccaccctatgacgccacagttcgaacatgtcttgactgtaggaaat
ctggttttcactggaattttcacagcggaaatgttcctgaagctcatagccatggatccc
tactattatttccaagaaggttggaacatttttgatggatttattgtctccctcagttta
atggaactgagtctagcagacgtggaggggctttcggtgctgcgatctttccgattgctc
cgagtcttcaaactggccaaatcctggcccaccctgaacatgctgatcaagattattgga
aattcagtgggtgccctgggcaacctgaccctggtgctggccattatcgtcttcatcttt
gccgtggtgggaatgcaactctttggaaagagctacaaagagtgtgtctgcaagatcaac
caggactgtgaactccctcgctggcacatgcatgacttttttcattctttcctcatcgtc
ttccgagtgttgtgcggggagtggatcgagaccatgtgggactgcatggaggtggccggc
caggccatgtgcctcatcgtcttcatgatggtcatggttatcggcaacttggtggtgctg
aacctgtttctggccttgctcctgagctccttcagtgctgacaacttggcagccacagat
gatgatggggaaatgaacaacctacagatctcagttatccggatcaagaagggcgtggcc
tggaccaaactgaaagtgcgcgccttcatgcaggcccacttcaagcagcgcgaggccgac
gaggtgaaacctctggacgagctgtacgaaaagaaggccaactgcatcgccaaccacact
ggcgccgacatccaccggaacggtgacttccagaagaatggcaatggcacaaccagcggc
attggcagcagcgtggagaagtacatcatcgatgaggaccacatgtccttcatcaacaac
cccaacctgaccgtgagagtgcccatcgcggtaggcgagtctgattttgagaacctcaac
accgaggacgttagcagcgagtcggaccctgaaggcagcaaagataaactggatgacact
agctcctctgaaggcagcaccattgatatcaaaccagaagtagaagaagtccctgtggaa
cagcctgaggaatacttggatccagatgcctgtttcacagaaggttgtgtccagaggttc
aagtgctgccaggtcaacattgaggaagggctgggcaagtcttggtggatcctgcggaaa
acctgcttcctcattgtggagcacaattggtttgagaccttcatcatcttcatgattctg
ctcagcagtggcgccctggccttcgaggacatctacattgagcagagaaagaccattcgt
accatcctggagtacgctgacaaggtcttcacctatatcttcatcctggagatgttgctc
aagtggatagcctatggcttcgtcaagttcttcaccaatgcctggtgctggctggacttc
ctcatcgtggctgtctctttagtcagccttatagctaatgccctgggctactcggaacta
ggtgccataaagtcccttaggaccctaagagctttgagacccttaagagccttatcacga
tttgaagggatgagggtggtggtgaatgccttggtgggcgccatcccctccatcatgaat
gtgctgctggtgtgtctcatcttctggctgattttcagcatcatgggcgttaacctgttt
gccggaaagtaccactactgctttaatgagtcttctgaaatccgatttgaaattgaagat
gtcaacaataaaactgagtgtgaaaagctcatggaggggaacaatacagaaatcagatgg
aagaacgtgaagatcaactttgacaacgtcggggcaggatatctggcgcttcttcaagtg
gcaaccttcaaaggctggatggacatcatgtatgcagctgtagattcccgaaagcctgat
gagcagcctaagtatgaggacaacatctacatgtacatctacttcgtcatcttcatcatc
ttcggctccttcttcaccctgaacctgttcatcggtgtcatcattgataacttcaatcaa
caaaagaaaaagtttggaggtcaagacatcttcatgaccgaagaacagaagaagtactac
aatgccatgaaaaagctgggctcaaagaaaccacagaaacccatcccccgccccctgaac
aaaatccaaggtatcgtctttgattttgtcactcaacaagcctttgacattgttatcatg
atgctcatctgccttaacatggtgacaatgatggtggagacagatactcagagcaagcag
atggagaacattctctactggattaacctggtctttgtcatcttcttcacctgtgagtgt
gtgctcaaaatgtttgccttgaggcactactacttcaccattggctggaacatcttcgac
ttcgtggtggtcatcctctccattgtgggaatgttcctggctgacataattgagaaatac
tttgtttccccaaccctattccgagtcatccgattggcccgtattgggcgcatcttgcgt
ctgatcaaaggcgccaaggggattcgtaccctgctctttgccttaatgatgtccttgcct
gctctgttcaacatcggccttctgctcttcctggtcatgttcatcttctccatctttggg
atgtccaattttgcgtatgtaaagcacgaggctggcattgatgacatgttcaactttgag
acgtttggcaacagcatgatctgcctatttcagatcacaacctcggccggctgggatggc
ctgctgctgcccatcctaaaccgcccccccgactgcagtctggataaggaacacccaggg
agtggctttaaaggagactgcgggaacccctcggtgggcatcttcttctttgtgagctac
atcatcatctccttcctgatcgtggtgaacatgtacattgccatcatcttggagaacttc
agcgtagccacggaggaaagtgcagaccctctgagtgaggatgactttgagaccttctac
gagatctgggagaagttcgaccccgatgccacccagttcatcgagtacagtaagctggca
gactttgcagacgccttggagcatcctctgcgggtgcccaagcccaacaccatcgagctc
atcgccatggatctgccaatggtcagcggggatcgcatccactgcttggacatccttttt
gccttcaccaagcgtgtcctgggagatagcggagagttggacatcctccggcagcagatg
gaggagaggttcgtggcatccaatccttccaaaatgtcttacgagccaatcacgaccacg
ctgcggcgcaagcaggaagaggtgtcagcggtggtcctgcagcgcgcctaccggggacat
ttagcaaggcggggcttcgtttgcaaaaagacaacttccaataagctggagaatggaggc
gcccaccgggagaagaaagagagcaccccgtctacagcctccctcccatcctatgacagt
gtaactaaacccgagaaggagaaacagcaacgggcagaggaaggaagaagggaaagagcc
agaagacaaaaagaggtcagagaatccaagtgttag
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integrated database retrieval system
