Pseudorca crassidens (false killer whale): 137202184
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Entry
137202184 CDS
T12027
Symbol
CPSF6
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
pcrs Pseudorca crassidens (false killer whale)
Pathway
pcrs03015
mRNA surveillance pathway
pcrs03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pcrs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137202184 (CPSF6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
137202184 (CPSF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcrs03019
]
137202184 (CPSF6)
Messenger RNA biogenesis [BR:
pcrs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
137202184 (CPSF6)
SSDB
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GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
137202184
NCBI-ProteinID:
XP_067553389
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All DBs
Position
11:58995072..59028762
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AA seq
589 aa
AA seq
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MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV
GDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRAN
GQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQM
SGEGKAGPPGGSSRAAFPQGGRGRARFPGAVPGGDRFPGPAGPGGPPPPFPGNLIKHLVK
GTRPLFLETRIPWHMGHSIEEIPIFGLKAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPL
AGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPF
PPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDP
YGRPPPYDRGDYGPPGREMDTARTPLSEAEFEEIMNRNRAISSSAISRAVSDASAGDYGS
AIETLVTAISLIKQSKVSADDRCKVLISSLQDCLHGIESKSYGSGSRRRERSRERDHSRS
REKSRRHKSRSRDRHDDYYRERSRERERHRDRDRDRDRERDREREYRHR
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggtgtggaccacatagacatttacgcggatgtgggcgaagagttcaaccag
gaagctgaatatggtgggcatgatcagatagatttgtatgatgatgtcatctctccatct
gcaaataatggagatgccccagaagatcgggattacatggatactctcccaccaactgtt
ggtgatgatgtgggtaaaggagcagcaccaaatgttgtctatacatatactggaaagaga
attgcattatatattggaaatctaacatggtggacaacagatgaagacttaactgaagca
gttcattctttgggcgtaaatgatattttggagataaaattttttgaaaatcgggcaaat
ggccagtcaaaggggtttgcccttgttggtgttggatctgaagcatcctcaaaaaagtta
atggatctgttgcctaaaagagaacttcatggtcagaatcctgttgtaactccatgcaat
aaacagttcctgagtcaatttgaaatgcagtccaggaaaactacacagtcaggacaaatg
tctggggaaggtaaagctggtcctccgggaggcagttcacgtgcagcctttccacaaggt
ggtagaggacgggcccgttttccaggggctgttcctggtggggacagatttcctgggcca
gcaggaccaggagggccacctccaccttttccaggaaatttgatcaagcatcttgttaaa
ggaactcggcctttgttcctggaaactaggattccatggcatatggggcacagcatagag
gaaatacccatttttggcctaaaagctggacagactccaccacgtccacccttaggtcct
ccaggcccacccggtccaccaggtcctccacctcctggtcaggttctgcctcctccttta
gctgggcctcctaatcgaggagatcgccctccaccaccagttctttttcctggacaacct
tttgggcagcctccattgggtccgcttcctcctgggcctccacctccagttccaggctac
ggcccccctcctggtccaccacctccacaacagggaccacctccacctccaggccccttt
ccacctcgcccacctggccctcttgggccaccccttacactcgctcctcctccgcatctt
cctggaccacctccaggtgccccaccaccagctccacatgtgaaccccgctttctttcct
ccaccaactaacagcggcatgcctacatcagatagccggggtccaccaccaacggatcca
tatggccggcctccaccatatgataggggtgactatgggcctcctggaagggaaatggat
actgcaagaacaccattgagtgaagctgagtttgaagaaatcatgaatagaaatagggca
atctcaagcagtgctatttcaagagctgtgtctgatgccagtgctggtgattatgggagt
gctattgagacattggtaactgcaatttctttaattaaacaatccaaagtatctgctgat
gatcgttgcaaagttcttattagctctttgcaagattgccttcatggaattgaatccaag
tcttatggttctggatcaagaagacgtgaacgatcaagagaaagggatcatagtagatcg
cgagaaaagagtcggcgtcataaatcccgcagtagagatcgtcatgatgattattacaga
gagagaagcagagaacgagagagacaccgggaccgggaccgggaccgcgatcgagagcgc
gaccgagagcgcgagtatcgtcatcgttag
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