KEGG   Pseudorca crassidens (false killer whale): 137202896
Entry
137202896         CDS       T12027                                 
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain
  KO
K19719  collagen type II alpha
Organism
pcrs  Pseudorca crassidens (false killer whale)
Pathway
pcrs04151  PI3K-Akt signaling pathway
pcrs04510  Focal adhesion
pcrs04512  ECM-receptor interaction
pcrs04518  Integrin signaling
pcrs04974  Protein digestion and absorption
pcrs05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:pcrs00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    137202896 (COL2A1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    137202896 (COL2A1)
   04518 Integrin signaling
    137202896 (COL2A1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    137202896 (COL2A1)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    137202896 (COL2A1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    137202896 (COL2A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:pcrs00536]
    137202896 (COL2A1)
Glycosaminoglycan binding proteins [BR:pcrs00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   137202896 (COL2A1)
SSDB
Motif
Pfam: Collagen COLFI VWC VWC2L_2nd
Other DBs
NCBI-GeneID: 137202896
NCBI-ProteinID: XP_067554789
LinkDB
Position
11:complement(42056119..42086647)
AA seq 1487 aa
MIRLGAPQTLVLLTLLVAAVLRCHGQDVQKAGSCVQDGQRYNDKDVWKPEPCRICVCDTG
TVLCDDIICEDMKDCLSPETPFGECCPICSTDLTTASGQPGPKGQKGEPGDIKDIVGPKG
PPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA
AQMAGGFDEKAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVAGPMG
PRGPSGPPGKPGDDGEAGKAGKPGERGLPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG
EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVG
PAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEAGTPGSPGPAGASGNPGSDGIPGAKG
SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPTGPQG
APGPAGEEGKRGARGEPGGAGPAGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAG
PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAAGEDGRPGPPGPQGARGQPG
VMGFPGPKGASGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPG
PSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGSQGLQGPRG
LPGTPGTDGPKGAAGPGGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPG
KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPSGTAGARGAPGERGETGPPGPAGFAGPPG
ADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG
AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPSGPPGEKGEPG
DDGPSGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPG
PVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGPLGAPGAPGPPGSPGPAG
PVGKQGDRGEAGAQGPMGPSGPAGARGMPGPQGPRGDKGETGEAGERGLKGHRGFTGLQG
LPGPPGPAGDQGTSGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAG
PPGNPGPPGPPGPPGPGIDMSAFAGLGQREKGPDPMQYMRADEAAGNLRQHDAEVDATLK
SLNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMDTG
ETCVYPSPASVPKKNWWNSKSKDKKHIWFGETINGGFHFSYGDDNLAANTANVQMTFLRL
LSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCTK
HTGKWGKTMIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL
NT seq 4464 nt   +upstreamnt  +downstreamnt
atgatccgcctcggggctccccagacgctggtgctgctgacgctgctcgtcgccgctgtc
cttcggtgtcacggccaggatgtccagaaggctggcagctgtgtgcaggacgggcagagg
tataacgataaggatgtgtggaagcccgagccctgccggatctgtgtctgtgacactggg
actgtcctctgcgacgacataatctgtgaagacatgaaagactgcctcagccccgagacc
cccttcggagagtgctgccccatctgctcaactgacctcaccactgccagtgggcaacca
ggaccaaagggacagaaaggagaacctggagacatcaaggatattgtaggacccaaagga
cctcctgggcctcagggacctgcaggtgaacaaggacccagaggtgatcgtggtgacaaa
ggtgaaaaaggtgctcctggacctcgtggcagagatggagagcctgggacccctggaaac
cctggcccccctggccctcctggcccccctggcccccctggtcttggtggaaactttgct
gctcagatggctggaggatttgatgagaaggctggtggcgcccagttgggagtaatgcag
ggaccaatgggccccatgggacctcggggacctccaggccctgctggtgctcccggacct
caaggatttcaaggcaaccctggtgaacctggggaacccggcgttgctggtcccatgggt
ccccgcggcccttctggcccccctggaaaacctggtgacgatggtgaagctggaaaggct
ggaaaacctggtgagagaggccttcctggtcctcagggtgctcgcggcttcccaggaacc
ccaggccttcctggtgtcaaaggtcacagaggttacccaggtctagatggtgctaaggga
gaagctggtgctccaggtgtgaagggtgagagtggttccccgggagagaacggttctcca
ggcccaatgggtccccgtggcctgcctggtgagagaggacggactggccctgctggcgct
gcgggtgctcggggcaacgatggccaacctggccccgcagggcctccgggtcccgtgggt
cctgctggcggtcctggcttccctggtgctcctggtgccaagggtgaagctggccccacc
ggtgctcgaggtcctgaaggtgcccagggtcctcgcggtgaagctggtactcctgggtcc
cccgggccggctggtgcctctggtaaccctggatctgatggaattcctggagctaaagga
tctgctggtgcccctggcattgctggtgctcccggcttccctgggccccgtggtccaccc
ggccctcaaggtgcaactggtcctctgggcccgaaaggtcaaacgggtgagcctggtatt
gctggcttcaaaggcgaacaaggccccaagggagaaccgggccctactggtccccaagga
gcccccggtcctgctggtgaagaaggcaaaagaggggcccgtggagagcctggtggtgct
gggcccgctggtccccctggagaaagaggtgctcctggcaaccgtgggttcccaggtcag
gatggtctggcaggtcccaagggagcccctggagagcgagggcccagtggtcttgctggt
cccaagggagccaatggtgaccctggccgtcctggagagcctggcctccctggagcccgg
ggtctcactggtcgccctggtgatgctggtcctcaaggcaaagttggtccttctggagcc
gctggtgaagatggtcgccctggacctccaggtcctcagggggctcgcgggcagcctggt
gtcatgggtttccctggccccaaaggtgccagtggtgagcctggcaaagctggtgagaaa
ggactgcctggtgctcctggtctgagaggtctccctggcaaagatggtgagacaggagct
gcaggcccccctggacctgctggacctgccggtgaacgaggcgagcagggtgctcctggg
ccatctgggttccagggacttcctggcccgcctggtcccccaggtgaaggtggaaaacca
ggtgaccagggcgttcctggtgaagctggagctcccggcctcgtgggtcccaggggtgaa
cgaggtttcccaggggaacgtggctctccagggtcccagggcctccaggggccccgcggc
ctgcctggcactcctggcactgatggtcccaaaggtgcagctggcccaggtggcccccct
ggggctcagggccctccaggtctgcaggggatgcccggtgagagaggagcagctggcatc
gctgggcccaagggagacaggggtgatgttggtgagaaaggccccgagggagcccccggg
aaggatggtggacggggtctgactggccccattggcccccctggcccggctggtgccaac
ggtgagaagggagaagttggacctcctggtccttcaggaactgctggtgctcgcggcgcc
ccgggtgaacgtggagagactggaccccccgggcccgctggatttgctggtcctcctggt
gctgacggccagcccggtgccaaaggcgagcaaggagaggctggccagaaaggtgacgcc
ggtgccccgggtcctcagggcccctctggagctcccgggcctcagggtcctactggtgtg
actggtcctaaaggagcccgaggcgctcaaggccccccgggagccaccggattccccgga
gctgcaggccgcgtcggacccccaggttccaatggcaaccctggaccccctggcccccct
ggtccttctggaaaagatggtcccaaaggtgctcgaggagacagcggcccccctggccga
gctggtgaccctggcctccaaggtccttccggaccccctggcgagaagggagagcctgga
gatgacggtccttctggtcccgacggtcctccaggtccccagggtctggccggtcagagg
ggcatcgtcggtctgccggggcagcgtggtgagcgaggattccccggcctgcccggccca
tcgggtgagcctggcaagcagggagctcctggagcatctggagaccgaggtccccctggc
cccgtgggtcctcctggcctgactggtcctgcgggtgaacctggacgcgagggaagccct
ggtgctgacggcccccctggcagagacggtgcagctggagtcaagggtgatcgtggtgag
accggtcccttgggtgcccccggagccccagggccccctggctctcctggccccgccggc
ccagttggcaagcagggagaccgaggagaagctggtgcacaaggccccatgggaccctca
ggaccagctggagcccggggaatgccaggccctcaaggcccccgaggtgacaaaggagaa
acgggagaggctggcgagaggggactgaaaggacaccgtggcttcactggtctgcagggt
ctgcccggcccccctggtcccgctggagaccaagggacttctggtcctgccggcccttct
ggccccagaggtcctcctggccccgtcggtccctctggcaaagatggcgctaatggaatc
cccggccccattggacctcctggaccccgtggacgttcaggcgaaactggccctgctggt
cctcctggaaatcctggaccccctggccctccaggtccccctggccctggcattgacatg
tccgcctttgctggcctaggccagagagagaagggccccgaccccatgcagtacatgcgg
gccgatgaggcagccggcaacctgagacagcacgacgccgaggtggatgccacgctcaag
tccctcaacaaccagatcgagagcatccgcagccccgagggatcccgcaagaaccccgcc
cgcacctgccgggacctgaaactctgccaccccgagtggaagagcggagattactggatc
gacccgaaccagggctgcaccctggacgccatgaaggttttctgcaacatggacactggc
gagacctgtgtctaccccagcccggccagcgttcccaagaagaactggtggaacagcaag
agcaaggacaagaaacacatctggtttggagaaaccatcaacggtggcttccacttcagc
tatggagatgacaacctggctgccaacaccgccaacgtccagatgaccttcctgcgcctg
ctgtccaccgagggctcccagaacatcacctaccactgcaagaacagcattgcctacctg
gacgaggccgctggcaacctcaagaaggccctgctcatccagggctccaacgacgtggag
atccgggccgagggcaacagcaggttcacgtatacggttctgaaggatggctgcacgaaa
cacaccggtaagtggggcaagactatgattgagtaccggtcgcagaagacctcacgtctc
cccatcattgacattgcacccatggacataggcgggcccgagcaggaattcggtgtggac
atagggcctgtctgcttcttgtaa

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