Pseudorca crassidens (false killer whale): 137203679
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Entry
137203679 CDS
T12027
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
pcrs Pseudorca crassidens (false killer whale)
Pathway
pcrs03013
Nucleocytoplasmic transport
pcrs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcrs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137203679 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
137203679 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcrs03019
]
137203679 (THOC5)
03041 Spliceosome [BR:
pcrs03041
]
137203679 (THOC5)
Messenger RNA biogenesis [BR:
pcrs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
137203679 (THOC5)
Spliceosome [BR:
pcrs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
137203679 (THOC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
137203679
NCBI-ProteinID:
XP_067556421
LinkDB
All DBs
Position
12:69748166..69780385
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AA seq
741 aa
AA seq
DB search
MSSESSKKRKPKVIRSDGAPAEGKRNRSDIEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
ELQRLMAEIQDLKSRGGKDVAIEIEDRKIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKVEVTM
GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACAHMKSSQPPRQDKTLSVA
IEGSVDEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVM
LDLRCKEHRLRTRRLSGHGSRAQPLHGMWDLPGPGHELVSPASAGGLSTTAPPDDSVLHL
TFYYLMNLNIMTVKAKVTTATELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQYQF
DKVGILTLRDYVLDLGHPYLWVQKMGGLHFPKEQPQHTVITDHSLSASHMETTMKLLKTR
VQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTIPHEDYTELHFTKDIMEA
GLAGDTNLYYMALVERGTAKLQAAVVLNPGYSSIPPIFQLCLNWKGEKTNNNDDNIRAME
SEVNVCYKELCGPWPGHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLRLF
RGPSRMKPFKYNHPQGFFSHR
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcggaatcgagcaaaaaacgaaagcccaaagtgatccgaagtgatggagctcca
gctgaagggaagcgtaatcgttctgacattgaacaggaaggtaaatactacagcgaggag
gctgaggtggacctgcgggaccctggcagagactatgagctgtacaagtacacgtgccag
gagttgcagaggctcatggcggagatccaggacctgaagagcaggggaggcaaggatgtg
gcaattgagatcgaagatcggaagatccagagctgtgtgcatttcatgactctaaaaaag
cttaaccgattagcccacatcaggttgaagaaaggaagagatcagactcatgaggccaag
cagaaagtggacgcctatcacctgcagctccagaacctgttgtatgaggtgatgcacctg
cagaaggagatcaccaaatgtctggagtttaagtcaaagcacgaagaaatcgatctggtc
agcttagaggagttttataaggaggctcctccagatatcagcaaggtggaagtcaccatg
ggagaccctcaccagcaaacccttgcacgtctggactgggagctggagcagcggaaaagg
ctggcggagaagtaccgagagtgcctgtccaacaaggagaagatccttaaggagattgaa
gtaaagaaggagtacctgagtagcctccagcctcgtctcaacagcatcatgcaggcttcc
ctaccggtgcaggagtatctgtttatgcccttcgaccaagctcacaagcagtatgagaca
gcccgacacctaccacctcccctctatgtcctctttgtccaggccactgcgtatgggcaa
gcctgtgctcatatgaaatcctcccagccccctagacaggataagacgttgtctgtggcg
attgaaggcagcgtggatgaggccaaggctctgttcaagcctcccgaggactcccaagat
gacgagagtgactcggatgctgaggaggagcagaccacgaaacgccggcgacccacactg
ggagttcagctggacgacaagcgcaaggagatgctgaagaggcacccgctgtccgtcatg
ctggacctgaggtgcaaagagcacaggctccggacgcgcaggctcagcggccatggctca
cgggcccagccgctccacggcatgtgggatcttcccggaccggggcacgaactggtgtcc
cctgcatcggcaggcggactctcaaccactgcgccaccagatgacagtgtactgcacctg
actttctactacctcatgaacctcaacatcatgacggtaaaagccaaagtgacaactgcc
acagaactgatcacccccatcagtgcaggtgacttgctgtctcctgactcagtactgagc
tgtttgtatcctggggatcatggaaagaaaactccaaatccagccaatcagtatcagttt
gataaagttggcatcctgactttgagggactacgtacttgacttagggcatccctatttg
tgggtgcagaagatgggtggcctccacttccccaaagagcagccccagcacactgtgatc
actgaccactctctgagcgccagccacatggagaccaccatgaaactgctgaagaccagg
gtgcagtcccgcttggccctccacaagcagtttgcctccctggaacacggcattgtgcca
gttaccagtgactgccagtacctcttccctgcaaaggttgtctctcgcctggtgaagtgg
gtgacgattccccatgaggattatacggaactgcattttaccaaagacatcatggaggcg
ggactggctggggacaccaatctctactatatggcactcgtggaaaggggcacagctaag
ctccaggctgccgtggtgctgaaccccggctactcctccatcccacccattttccagctc
tgtctgaactggaaaggggagaaaaccaacaacaacgacgacaatattcgggccatggag
agtgaagtcaatgtgtgctacaaggagctgtgtggcccctggcccggccaccagctcttg
acgaaccagctgcagcgcctgtgcgtgctgctggatgtctacctggagacggagagccac
gacgacagcgtggaggggcccaaggaatttccccaggagaaaatgtgtctgcggcttttc
aggggccccagcaggatgaagccatttaaatataaccatcctcaaggattcttcagccat
cgctga
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