Pseudorca crassidens (false killer whale): 137203850
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Entry
137203850 CDS
T12027
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
pcrs Pseudorca crassidens (false killer whale)
Pathway
pcrs03030
DNA replication
pcrs03410
Base excision repair
pcrs03420
Nucleotide excision repair
pcrs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcrs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
137203850 (RFC5)
03410 Base excision repair
137203850 (RFC5)
03420 Nucleotide excision repair
137203850 (RFC5)
03430 Mismatch repair
137203850 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcrs03032
]
137203850 (RFC5)
03036 Chromosome and associated proteins [BR:
pcrs03036
]
137203850 (RFC5)
03400 DNA repair and recombination proteins [BR:
pcrs03400
]
137203850 (RFC5)
DNA replication proteins [BR:
pcrs03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
137203850 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
137203850 (RFC5)
Chromosome and associated proteins [BR:
pcrs03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
137203850 (RFC5)
DNA repair and recombination proteins [BR:
pcrs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
137203850 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
137203850 (RFC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_24
AAA_lid_RFC1
AAA_11
AAA_22
AAA_assoc_2
AAA_16
RuvB_N
DEAD
AAA_14
DUF815
nSTAND_NTPase5
ResIII
AAA_5
nSTAND3
AAA_19
ATPase_2
AAA_30
PhoH
TniB
TIP49
AAA_7
DNAX_ATPase_lid
Thioredoxin_6
bpMoxR
NPHP3_N
ABC_tran
AAA_3
AAA_28
Motif
Other DBs
NCBI-GeneID:
137203850
NCBI-ProteinID:
XP_067556860
LinkDB
All DBs
Position
12:80906563..80917888
Genome browser
AA seq
341 aa
AA seq
DB search
METSAHKQQQQQPEGGKIRNLPWVEKYRPQTLDDLISHQDILSTIQKFISEDRLPHLLLY
GPPGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGF
KLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTP
ELMVPRLEHVAEEEKVDISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCT
GHPLKSDIANILDWMLNQDFTTAYRNIMELKTLKGLALHDILTEIHLFVHRVDFPSSIRI
HLLTKMADIEYRLSVGTNEKIQLSSLIAAFQVTRDLIVTEA
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggagacctcagcgcacaagcagcagcagcagcaacctgaagggggcaagatcaggaac
ctgccctgggttgaaaaataccggccacagacactggatgatctcatttctcatcaggac
atcttgagtaccattcagaagtttatcagtgaggaccgcctgccgcacctccttctctat
ggtcctccagggacgggaaagacatccaccatcctggcctgtgctaaacagctctacaaa
gataaggaatttggctccatggtcttggagctgaatgcttcagatgaccgaggaatagat
atcgttcggggaccaatcctgagctttgctagcacaaggacaatatttaagaaaggcttt
aaactagtgatcttggatgaagctgatgccatgactcaggacgcccagaacgccttgcgg
agagtgattgagaaatttactgaaaataccagattttgcctcatctgtaactatctgtca
aagatcatccccgccttgcagtcccggtgtacaaggttccgattcggtcccctgacccct
gaactcatggttccccgcctggaacatgtcgcagaagaagagaaagttgacataagtgaa
gacgggatgaaagcgctcgtaactctttccagtggagacatgcgaagggctctgaacatc
ttgcagagcaccaacatggcctttgggaaggtgacagaggagaccgtctacacctgcaca
gggcacccactcaagtcagacatcgccaacattctggattggatgttgaatcaagacttc
accacggcctacaggaatatcatggagttgaaaactctaaaggggttggcattacatgac
atcctgacagagatacacctgttcgtgcacagagttgactttccatcttcaattcgaata
catttattgaccaaaatggcagacattgagtacagactttctgttggcaccaatgagaag
atacagctgagttccctcattgccgcctttcaagtcaccagagacctgattgtcacagaa
gcctag
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integrated database retrieval system
