Pseudorca crassidens (false killer whale): 137218754
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Entry
137218754 CDS
T12027
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
pcrs Pseudorca crassidens (false killer whale)
Pathway
pcrs03013
Nucleocytoplasmic transport
pcrs05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pcrs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137218754 (NDC1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
137218754 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcrs03019
]
137218754 (NDC1)
Messenger RNA biogenesis [BR:
pcrs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
137218754 (NDC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
137218754
NCBI-ProteinID:
XP_067582311
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All DBs
Position
2:complement(44833229..44881913)
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AA seq
777 aa
AA seq
DB search
MERRPQFLAPRRTLLRRDVLDSRGRGLESQPSLGDVSAGRFWPVGPVQTKPRRDGLGPGP
GFAQAASETAPMGPSGGLPPFELRWRVGSLYPVPFRVGAAITMATAASLPCAGGPRDILW
RVLGWRIVTSIVWSLLLLPICTTVFVIFSSIDLFHPIQWLSDSFSDLYSSYIIFYLLLLS
VVIVIISIFNVEFYTVVPSIPCSRLALIGKIIHPQQLMHSFIHAAMGMTMAWCAAVITKG
QYSFLVVPCTVTESLDSPAAQTCLNEYHLFFLLAGAFMGYSYSLLYFINNMNYLPFPIIQ
QYKFLRFRRSLPLLVKHSCVESLFLLRNFCIVYYFLGHIPKAWISTAMDLQLDEQFHRPL
DTVSGLLNLSLLYHVWLCGVFVLMTWYISWILFKIYATEARLFPVQPPFSEESDECLPKV
LNSNPPLIIKYLALQDLMLLSQYSPSRRQEVFSLSQPGGHPHSWTAISRECLNLLNDMTQ
KLVLYQEAAATNGRVMSSSYPVEPKKLNSPEETTFQTPKSSQMPRPSVPSLIKTSLFSSK
LSTPDVASPLATPFGSSVVNRMTGIFDVNTCYASPQSPQLTRRGPRLWTSASGQQMTEYS
NPSPSTSVSAEGKTVRQPNMIYSWIQNKREQIKNFLSKRVLIMYFFSKHPEASIQAVFSD
AQMHIWALEGLSHLVAASFTEDRFGVVQTTLPAILNTLLTLQEAVDKYFKLPHASSKPPR
ISGSLVDTSYKTLRFAFRASLKTAIYRITTTFGEHLNAVQASAEHQKRLQQFLEFKE
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggagcgccgcccccagtttctggcgccccgccggaccctgcttcggagagacgttttg
gactccagagggcggggtctggagtcccagccctctttgggggacgtgtctgcggggcgg
ttctggcctgttgggcccgtccagacgaaacctcgaagggatgggttggggcctgggcca
gggttcgcccaggcagcgtctgagacagccccaatggggccctcggggggccttcctccc
tttgaactgcggtggcgggtgggctcactgtatcctgtacctttcagagtaggggccgcc
atcaccatggccactgctgcgagcctgccgtgcgccggcggaccgcgggacatcctgtgg
cgcgttttgggctggaggatagttacaagtattgtctggtcattgctgcttctgcccatc
tgtaccacagtatttgtcatcttcagcagcattgatttatttcatcctatacagtggctg
tctgattctttcagtgatctgtatagttcctatataatcttttaccttctgctgctgtca
gtggtaatagtaataataagtattttcaatgtggagttctatacagttgtgccttccatt
ccttgctcaagactggcactgatagggaagatcattcatcctcagcagctcatgcactcc
tttattcatgctgcaatgggaatgacgatggcttggtgtgctgcggtgataaccaagggt
caatacagttttcttgtggttccctgcactgttactgagagcttagatagccctgctgca
caaacctgcttaaatgagtatcaccttttttttctgctggctggagcatttatgggctat
agctatagcctcctgtattttattaacaacatgaactatcttccatttcccatcatacag
caatacaagttcttgcgcttcaggaggtctctgcctttgctagttaagcatagttgtgtg
gaatcgctgttcctgcttagaaatttctgcattgtgtattattttcttggccacattccc
aaagcttggattagcactgctatggaccttcagttagatgagcagtttcataggcctctt
gacactgtgagtggcctcttgaatctctcattactttaccatgtctggctctgtggtgtc
tttgtcctgatgacttggtacatctcatggatcctcttcaaaatctatgccacagaggct
cgtctgttccctgttcaaccaccattttcagaagagtcagatgaatgcctcccgaaagtt
ttaaacagcaatcctcccctcatcataaagtatttggccttgcaggacctgatgttgctt
tctcaatattctccttcacgaagacaagaagtttttagccttagccagccaggtggacat
ccccacagttggacagccatttcaagagagtgtttgaatcttttaaatgatatgactcag
aaacttgtactctatcaagaagctgctgctacaaatgggagagtgatgtcttcatcctac
ccagtggaacctaagaaattgaattctccagaagaaactacttttcaaacccccaagtct
agccagatgcctcggccttcagtgccatcattaattaagacatcgctgttctcctcaaaa
ttgtctacacctgatgttgcaagtcccttggcgaccccatttggctctagtgtagtgaat
cggatgactgggatttttgatgtaaacacgtgctatgcgtcacctcaaagtcctcagctt
acaagaagagggccaagattatggacttcggcttctggtcagcaaatgactgaatattct
aatccttctccatctacctctgttagtgctgagggtaagacagtgagacagcccaatatg
atttattcatggattcagaataaacgtgaacagattaagaatttcttatcaaaacgggtg
ctgataatgtattttttcagtaagcacccagaggcctccattcaggctgttttttcagat
gcccaaatgcatatttgggcattagaaggtctgtctcacttagtagcagcatcatttaca
gaagatagatttggagttgtccagactacactaccagctattcttaatactttgttgacg
ctacaagaggcagttgataagtacttcaagcttcctcatgcttccagtaaaccacctcgg
atttcaggaagcctagtggacacttcttataaaacattaagatttgcctttagagcatca
ctaaaaactgccatctatagaataactactacatttggtgaacatctgaatgctgtgcaa
gcatctgcagaacatcagaaaagacttcaacagttcttggagttcaaagaatag
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