Pseudorca crassidens (false killer whale): 137218963
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Entry
137218963 CDS
T12027
Symbol
LOC137218963
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
pcrs Pseudorca crassidens (false killer whale)
Pathway
pcrs03013
Nucleocytoplasmic transport
pcrs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcrs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137218963 (LOC137218963)
09122 Translation
03013 Nucleocytoplasmic transport
137218963 (LOC137218963)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcrs03019
]
137218963 (LOC137218963)
03041 Spliceosome [BR:
pcrs03041
]
137218963 (LOC137218963)
Messenger RNA biogenesis [BR:
pcrs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
137218963 (LOC137218963)
Spliceosome [BR:
pcrs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
137218963 (LOC137218963)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
137218963
NCBI-ProteinID:
XP_067582949
LinkDB
All DBs
Position
2:complement(78781649..>78784015)
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AA seq
634 aa
AA seq
DB search
LHQTTVSSESSKNRKPKVIRSDGAPAEGKHNRSDTEQEGKYYSEEAEVDLWDPXRDYELY
KYTCQELQRLMAEIQDLRSRGDKDAAVEIEDRRIQSCVHFMTLKKLNRLAHIRLKKGRDQ
THEAEQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSNHEEIDRVSLEEAPPDISKAEVT
IGDPHQQTLARLDWELEQRKSLVEKYRECLSNKEKILKETEVKKEYLSSLQPRLNSIMQA
SLPVQEXNFMPFDQAHKQYETARHLPPPLYVQATVYGQDKRKEMLKRHPLSVMLDLRCKD
DSELHLTFYYLMNLNIMTVKAKVTTATELITPISAGDLLSPDSVLSCLYAGDHGKKTPNP
ANQYQFDKVGILTLRDYILDLGHPYLWVQKLGGLHLPKEQPQHTVIADHSLSARHMETTM
KPLETTMKPLKTRAQSRLARHKWFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTIAHED
YTELHFTKDIVEAGLAGDTNLYYMALVERGTAKLQAAMVLNPGYSSIPPIFQLCLNWKGE
KTNNNDDNIRAVESEVNVCYKELCGPRPGHQLLTNQLQRLCVLLDVYLETESHDDSVEGP
KEFPQEKMCLRLFRGPSRMKPFKYNHSQGFFSHR
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
cttcaccaaacaaccgtgtcatcggaatcgagcaaaaatcgaaagcccaaagtgatccga
agtgatggagctccagctgaagggaagcataatcgttctgacactgaacaggaaggtaaa
tactacagcgaggaggctgaggtggacctgtgggaccgcagagactatgagctgtacaag
tacacgtgccaggagttgcagaggctcatggccgagatccaggacctgaggagcagggga
gacaaggacgcggcagttgagatcgaagatcggaggatccagagctgtgtgcatttcatg
actctaaaaaagcttaaccgattagcccacatcaggttgaagaaaggaagagatcagact
catgaggccgagcagaaagtggacgcctatcacctgcagctccagaacctgttgtatgag
gtgatgcacctgcagaaggagatcaccaaatgtctggagtttaagtcaaatcacgaagaa
atcgatcgggtcagcttagaggaggctcctccagacatcagcaaggcggaagtcaccata
ggagaccctcaccagcagacccttgcacgtctggactgggagctggagcagcggaaaagc
ctggtggagaagtaccgagagtgcctgtccaacaaggagaagatccttaaggagactgaa
gtaaagaaggagtacctgagtagcctccagcctcgtctcaacagcatcatgcaggcttcc
ctaccggtgcaggataactttatgcccttcgaccaagctcacaagcagtatgagacagcc
cgacacctacctcctcccctctatgtccaggccactgtgtatgggcaagacaagcgcaag
gagatgctgaagaggcacccgctgtccgtcatgctggacctgaggtgcaaagatgacagt
gaactgcacctgactttctactacctcatgaacctcaacatcatgacggtaaaagccaaa
gtgacaaccgccacagaactgatcacccccatcagtgcaggtgacttgctgtctcctgac
tcagtcctgagctgtttgtatgctggggatcatggaaagaaaactccaaatccagccaat
cagtatcagtttgataaagttggcatcctgactttgagggactacatacttgacttaggg
catccctatttgtgggtgcagaagctgggtggcctccacctccccaaagagcagccccag
cacactgtgatcgctgaccactctctgagcgccagacacatggagaccaccatgaaaccg
ctggagaccaccatgaaaccgctgaagaccagggcgcagtcccgcctggcccgccacaag
tggtttgcctccctggaacacggcattgtgccagttaccagtgactgccagtacctcttc
cctgcaaaggttgtctctcgcctggtgaagtgggtgacgattgcccatgaggattatacg
gagctgcattttaccaaagacatcgtggaggcgggactggctggggacaccaatctctac
tatatggcacttgtggaaaggggcacggctaagctccaggctgccatggtgctgaacccc
ggctactcctccatcccacccattttccagctctgtctgaactggaaaggcgagaaaacc
aacaacaacgacgacaatattcgggccgtggagagtgaggtcaatgtgtgctacaaggag
ctgtgcggcccccggcccggccaccagctcttgacgaaccagctgcagcgtctgtgtgtg
ctgctggacgtctacctggagacggagagccacgatgacagcgtggaggggcccaaggaa
tttccccaggagaaaatgtgtctgcggcttttcaggggccccagcaggatgaagccgttt
aaatataaccactctcaaggattcttcagccatcgctga
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