Pseudorca crassidens (false killer whale): 137226573
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Entry
137226573 CDS
T12027
Symbol
SCN9A
Name
(RefSeq) sodium channel protein type 9 subunit alpha
KO
K04841
voltage-gated sodium channel type IX alpha
Organism
pcrs Pseudorca crassidens (false killer whale)
Pathway
pcrs04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
pcrs00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
137226573 (SCN9A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcrs04040
]
137226573 (SCN9A)
Ion channels [BR:
pcrs04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
137226573 (SCN9A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Lustrin_cystein
HB_ELP1
Motif
Other DBs
NCBI-GeneID:
137226573
NCBI-ProteinID:
XP_067597777
LinkDB
All DBs
Position
6:65465050..65551736
Genome browser
AA seq
1987 aa
AA seq
DB search
MAMLPPPGPQSFVYFTKQSLALIEQRIAEGKTKEPKEEKKDDDEEGPKPSSDLEAGKQLP
FIYGDIPQGMVSEPLEDLDPYYADKKTFIVLNKGKAIFRFNATPALYILSPFSPLRRISI
KILVHSAFSMLIMCTILTNCIFMTMSNPPDWTKNVEYTFTGIYTFESLVKILARGFCVGE
FTFLRDPWNWLDFIVIVFAYLTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQ
SVKKLSDVMILTVFCLSVFALIGLQLFMGNLKQKCVRTLLENNETIESILNTLDEEDYGK
YFYYLEGSKDALLCGFSTDSGQCPEGYTCVKVGKNPDYGYTSFDTFSWAFLALFRLMTQD
YWENLYQQTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYEEQNQANIEEARQKEL
EFQQMLDRLKKEQEEAEAIAMAAAEYTSIERSRIMGLSESSSETSKMSSKSAKERRNRRK
KNNQKKLSIGEEKGDDEKLSKWESEESIRRKSFHLGVEGHRRAREKRFSTPNQSPLSIHG
SLFSARRSSRTSLFSFKGRGKDIGSETEFADDEHSIFGDNESRRGSLFVPHRPRERRSSN
ISQASRSPPGLPVNRKMHSAVDCNGVVSLVDGPSALMLPNGQLLPEVIIDKATSDDSGTN
NQIHKKRRSSSYLLSEDMLNDPNLRQRAMSRASILTNTVEELEESRQKCPPWWYRFAHTF
LIWNCSPYWIKFKRLIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKNVLTVGNL
VFTGIFAAEMVLKLIAMDPYEYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLR
VFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINE
DCTLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVYMMVMVIGNLVVLN
LFLALLLSSFSSDNLTAIEEDTDANNLQTAVARIKKGINYVKQTLREFFLKAFSTKPKIS
KEIRRTEDLNYKKENYISNHTLAEMSKDHNFHKEKDKTSGFGNSMDKYLVEESDCQSFIH
NASLTVTVPIAPGESDLEIMNTEELSSDSDSEYSKGRLNGSSSSECSTVDNPVPGEGEEA
EAEPVNSDEPEACFTDGCVQRLPCCQVNTESGKGKIWWNIRKTSYRIVEHSWFESFIVLM
ILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILEMLLKWIAYGYKTYFTNAWCWL
DFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPSI
MNVLLVCLIFWLIFSIMGVNLFAGKFYQCVNTTDGSPFPTSEVENRSECFALMNVSQNVR
WKNLKVNFDNVGLGYLSLLQVATFKGWMVIMYAAVDSVNVDRQPIYEYSLYMYIYFVIFI
IFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPG
NKFQGCIFDLVTNQAFDIAIMVLICLNMVTMMVEKEGQSAYMTEVLYWINVVFVILFTGE
CVLKLISLRCYYFTVGWNIFDFVVVILSIVGMFLADLIERYFVSPTLFRVIRLARIGRIL
RLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEAGINDMFNF
ETFGNSMICLFQITTSAGWDGLLAPILNSAPPDCDPRKVHPGSSVEGDCGNPSVGIFYFV
SYIIISFLVVVNMYIAVILENFSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEYSK
LSDFAAALDPPLLVAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDSLRS
QMEERFMSANPSKVSYEPITTTLKRKQEDVSATVIQRAYRRYRLRQNVKNISSIYIKDGD
RDDDLPNKEDMVFDNVNENSSPEKTDGTPSTISPPSYDSVTKPDKEKYEKDKTEKEDKGK
DGKEGKN
NT seq
5964 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgttgcctcccccaggacctcagagctttgtctacttcacaaaacagtctctt
gccctcattgaacaacgtattgctgaaggaaaaacaaaggaacccaaagaagaaaagaaa
gacgatgacgaagaagggccaaagccaagcagtgacttggaagccggcaaacagctgccc
ttcatctatggggacatccctcagggcatggtttcggagcccctggaggacctggaccct
tactatgcagacaaaaaaactttcatagttttgaacaaagggaaagcaatcttccgtttc
aatgccacacctgctttgtacatcctctctcctttcagtcctctcagaagaatatctatt
aagattttagtacactccgcattcagcatgcttatcatgtgcactattctgacgaattgc
atatttatgaccatgagtaaccctccagattggaccaagaatgtagagtacacttttact
ggaatctatacttttgaatcacttgtaaaaatccttgcaagaggcttctgtgtaggagaa
ttcactttccttcgtgacccttggaactggcttgattttattgtcattgtttttgcgtat
ttaacagaatttgtaaatctaggcaatgtttcagctcttcgaactttcagagtgttgaga
gctttgaaaactatttctgtaatcccaggcctgaagaccatcgtaggggccctgatccag
tctgtgaagaagctttctgacgtcatgatcctgactgtgttctgtctgagcgtgtttgca
ctgattggactgcagctctttatgggcaacctgaagcaaaaatgtgtgcggaccctgctt
gaaaataatgaaacaatagaaagcatattgaatactctcgatgaagaagactatggaaaa
tatttttattacttggagggatccaaagatgctctcctttgtggtttcagcaccgattca
ggtcagtgtccagaagggtacacctgtgtgaaggttggcaagaaccctgattatggctac
acgagcttcgatactttcagttgggccttcttagccttgtttcggctaatgacccaggat
tactgggaaaacctttaccaacagacactgcgtgctgctgggaaaacctacatgatcttc
tttgttgtggtgattttcctgggatccttttatctaataaacttgatcctggcagtggtt
gccatggcctatgaagaacagaaccaggcaaacatcgaagaagctaggcagaaagagtta
gaatttcaacagatgttagatcgacttaaaaaagagcaagaggaagctgaggcaatagca
atggcagcagctgaatatacaagcattgagagaagccggataatgggcctctccgagagt
tcttccgaaacatccaaaatgagctctaaaagtgctaaagaaagaagaaacagaagaaag
aaaaataatcaaaagaaactctccattggggaagaaaagggagatgatgagaaattgtcc
aaatgggaatccgaggagagcatcaggagaaaaagtttccaccttggtgttgaaggtcat
aggcgagcacgtgaaaagagattttctacccctaaccagtcaccactcagcattcatggc
tccttgttttctgcaaggcgaagtagcagaacaagtctttttagtttcaaaggtcgagga
aaagatattggatctgagactgaatttgctgacgacgagcatagcatctttggggacaat
gagagcagaaggggctcactgttcgtgccccacagacctcgggagcggcgcagcagtaat
atcagccaagccagtaggtcccccccagggctgccggtgaacaggaagatgcacagcgcc
gtggactgcaatggtgtggtctccttggtggatggaccctcagccctcatgctccccaat
ggacagcttctgccagaggtgataatagataaggcaacttctgatgacagtggtacaaac
aatcaaatacacaagaaaagacgttccagttcttacctcctttctgaggatatgttgaat
gatcccaatctcagacaaagggcaatgagtagggcaagcatattaacaaacactgtagaa
gaactcgaggagtccagacaaaaatgtccaccttggtggtacagatttgcacacacattc
ttgatctggaattgctctccatattggataaaattcaaaagacttatctattttattgta
atggatccttttgtagatcttgctattaccatttgcatagttttaaacactctgttcatg
gctatggaacatcacccaatgactgatgaattcaaaaacgtgctcactgtgggaaatttg
gtctttactggcatctttgcagctgaaatggttttaaaactaattgccatggatccatat
gagtacttccaagtaggatggaatatttttgacagtcttattgtgactttaagcttagtg
gagctttttctagcagatgtggaaggattgtcagttctacgatcattcagactgctccga
gttttcaagttggcaaaatcttggccaacactgaacatgctgatcaagatcattggtaac
tcagtgggggctctgggtaacctcaccttggtgttggccatcatcgtcttcatttttgcc
gtggtcggcatgcagctctttggtaagagctacaaagaatgtgtctgtaagatcaatgaa
gactgcacactcccacgctggcacatgaatgacttcttccactccttcctgattgtgttc
cgagtgctgtgtggagagtggatagagaccatgtgggactgcatggaggtcgccggtcaa
gccatgtgccttattgtttacatgatggtcatggtcattggaaacctggtggtcctcaac
ctatttcttgctttattactgagctcatttagttcagacaatcttacagcaattgaagaa
gacactgatgcaaacaacctccagactgcagtggctagaattaagaagggaataaattat
gtgaaacaaaccttacgtgaattttttctaaaagcattttccacaaagccaaagatttcc
aaagagataagacgaacagaagatctaaattataagaaggaaaactacatctctaaccac
acacttgctgaaatgagcaaggatcacaattttcacaaagaaaaagataaaaccagtggt
tttggaaacagcatggacaaatacttggtggaagaaagtgattgtcaatcatttattcat
aatgccagcctcacagtgacagtgccaattgcacccggggaatctgatttggaaattatg
aatactgaggaacttagcagtgattcagatagtgaatacagcaaagggaggctgaacgga
tcgagttcctctgagtgcagcacagttgataaccctgtgccaggagaaggagaggaagca
gaggctgagcctgtaaattcagatgagccagaggcctgttttacagatggttgtgtgcag
aggctcccatgctgccaagttaacacagaatcagggaaaggaaaaatctggtggaacatc
aggaagacctcctataggatagttgagcacagttggtttgaaagcttcattgtcctcatg
atcttgcttagcagtggtgctctggcttttgaagatatatatattgaaaagaaaaagacc
attaagattatcctggagtatgctgacaagatattcacttacatctttattctggaaatg
cttctaaaatggatagcatatggttataaaacctatttcaccaatgcctggtgttggctg
gatttcttaattgtcgatgtttctttggttactttggtcgcaaacactcttggctactca
gaccttggccccattaaatcccttcggacacttagagccttaagacctctgagagcttta
tctagatttgaaggaatgagggtggttgtgaatgcactcataggtgcaatcccttccatc
atgaatgtgctacttgtgtgtcttatattctggctaatatttagcatcatgggagtaaat
ttgtttgctggcaagttctatcagtgtgttaacaccacagatgggtcaccgtttcctaca
agtgaagttgaaaatcgttctgagtgttttgcacttatgaatgttagtcaaaatgtgcga
tggaagaacctgaaagtgaactttgataatgttggacttggttacctgtctctgcttcaa
gtcgcaacatttaaaggatggatggttattatgtatgcagcagttgattctgttaacgta
gacaggcagcccatatatgaatacagcctctacatgtatatttattttgtcatcttcatc
atctttgggtcattcttcaccttgaacttgttcattggggtcatcatagataacttcaac
caacagaaaaagaagcttggaggtcaagatatctttatgacagaagaacagaagaaatat
tataatgcaatgaaaaagctgggatccaagaaacctcaaaagccaatacctcgtccgggg
aacaaattccaaggatgtatatttgacctagtaacaaaccaagcttttgatatagccatc
atggttcttatctgcctcaacatggtaaccatgatggtagaaaaagagggacaaagtgca
tacatgactgaagttttatattggatcaatgtagtttttgttatccttttcactggagaa
tgtgtgctgaaactgatctccctcagatgctactacttcactgtaggatggaacattttt
gattttgtggttgtgattctctccattgtaggtatgtttctagcagatttgatagaaagg
tattttgtgtcccctaccctgttccgagtgatccgtcttgccaggattggccgaatcctg
cgtctgatcaaaggggccaaggggatccgcacgctgctctttgctttgatgatgtccctt
cctgcgttgtttaacatcggcctcctgctctttctggtcatgttcatttacgccatcttt
ggaatgtccaactttgcctacgttaaaaaggaagctggaattaatgacatgttcaacttt
gagacctttggcaacagcatgatctgcctgttccagattaccacctctgctggctgggat
ggattgctagcacctattctcaacagtgcaccgcctgattgtgaccccaggaaagttcat
cctggaagctcagttgaaggagactgtgggaacccatctgtggggatattctatttcgtc
agttacatcatcatatcattcctggtcgtggtgaacatgtacatcgctgtcattctggag
aacttcagtgttgccactgaagaaagtactgagccgctgagtgaggatgactttgagatg
ttctacgaggtttgggagaagtttgatcccgatgccacccaatttatagaatatagcaaa
ctctctgattttgcagctgccctggatcctcctcttctcgtagcaaaaccaaacaaagtc
cagctcattgccatggatctgcccatggtcagtggggaccggatccattgtctcgacatc
ttatttgcttttacaaagcgtgttttgggtgaaagtggagagatggactctcttcgttca
cagatggaagaaaggttcatgtctgcaaatccttctaaagtgtcctatgaacccatcaca
actacactaaaacgaaaacaggaagatgtgtctgctactgtcattcagcgtgcttacaga
cgttatcgcttacggcaaaatgtcaagaacatatcaagtatatacataaaagatggtgac
agagatgatgatttgcccaataaagaagatatggtttttgataacgttaatgagaactca
agtccagaaaaaacagatggaactccatccaccatctctccaccttcatatgatagtgta
acaaaaccagacaaagagaaatatgaaaaagacaaaacagaaaaggaggacaaaggaaaa
gatggcaaggaaggcaaaaactag
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