Pseudorca crassidens (false killer whale): 137226646
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Entry
137226646 CDS
T12027
Symbol
RIF1
Name
(RefSeq) telomere-associated protein RIF1
KO
K11138
telomere-associated protein RIF1
Organism
pcrs Pseudorca crassidens (false killer whale)
Pathway
pcrs04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
pcrs00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
137226646 (RIF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcrs03032
]
137226646 (RIF1)
DNA replication proteins [BR:
pcrs03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
137226646 (RIF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rif1_N
XMAP215_CLASP_TOG
Motif
Other DBs
NCBI-GeneID:
137226646
NCBI-ProteinID:
XP_067598066
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All DBs
Position
6:complement(78669885..78735761)
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AA seq
2467 aa
AA seq
DB search
MTAPGHSPFVPLLETLEDPSASHGEQTDAYLTLTSRMTGEDGKEIIIEIEKKLPQLFRVL
KTHIASQNSELSSAALQALGFCLYNPKITSGLSETNIQELLSKLNDIVKNSDKNVRTRAL
WVISKQTFPTEVVGKVVSSIIDSLEIVFNRGEMHSAVVDYEALNVIIRLIEQAPIQMGEE
SIRWAKLVIPLVVHSAQKVHLRGATALEMGMPLLLQKQQEIASITEQLMTTKLLSELQKL
FMSKNETYVLKLWPLFVKLLGKTLHRSGSFINSLLQLEELGFRSGAPMIKKIAFIAWKSL
IDNFALNPEILCSAKRLKLLMQPLSSIHVRTETLALTKLEVWWYLLMRLGPHLPANFEQV
CVPLIQSTISIDSNASPQGSSSRVATSPALNPATPVHKGASPYGTPRMNLSSNFGGMATI
PSIQVLGLEMLLHFLLGPEVLSFAKQNKLMLSLERLEHPLISSSSFFSKHANTFITAVRD
SFVAIRKDASDAIVNAIWKELVSLVKSVIESGNKKERPGSEVLTLLLKSLESIVKSEVFP
VLKTLVLMEITIKGLPQKVLGSPAYQVANMDILNGTPALFLIQLIFNNNLLTCGVEDERF
FLNLETLVGCVLSGPTSPLAFSDSVLNVINQNAKQLENKEHLWRMWSIIVTPLTELINQT
NEVNQGDALEHNFSAIYCALTLPINHIFSAQKIPAATMKTLLKTWSELYRAFARCAALVA
TAEENLCCEELSSKIMSSLEDEGLSNLLFLDRITHIITVMVDCIDFSPYNIKYQPKIKSP
QRPSDWSKKKKEPLGKLASLFKLIVRVIYSFHTLSLKEVHSDTLLTIGNSITSILSNVLG
HISLPFMIRKIFATLTRPLALFYENSKFDEVPKVYSCMNNKLEKLLGEIIACLHVSYTGT
YDSELLEQISPLLCIVFSHKNKQIRKQSAQFWNATFAKVTMLIYPEELKPILKQAKQKSL
LLLPGLENVEIIEESSGPYSDTTENSQLNMKISGMERTSSGKRDSFLAQTKDTKDNMKPP
AKLKLESSTPKAKSEMPLEEEKSTDFVFIPPEEKETKERILTEHQKEVLKTKRCDIPAMY
NNLDVSQDTLFSQYGQEESMEIPTLTEKSKEDSKMIFKEEQKESDIVIPQHVMENCGMDE
HLEKASLSNNECGSIEETNPEILSSNDARKKALIVSKKTPTECASSTENTFGVSSSSVSN
ATISGTPPPQPASRRQSFITLEKFDGSENRPFSPSPLNNMSSAVIVKNNQEGTAKTDNPP
KAKKREVALSKSDSAKTVHGIKRSVRRSSKPEPIGNKKSKSLMRSDQEKSTRESVDGMVA
LENNPPGLLNQTECALDNQVHLSESSVEYEDTMLKPTIENTILLENSTVEEKTLEINLES
KENTPPAIITTDQTVNEDSHVQITPNHKTLRRSLRRRSETAEPTTDSQDKENNQKRERRK
EEEKTLQRSPLHVKDDVLPKQKLISEQTVQENLIEKGNNLHEKTFGETSANAEIDENRRK
PDLETTKSEGDGAQDIADKSSEKTVRGRTRYQTRRASQGLLSSIENSESDSSEAKEEGSK
KKRSGKWKNKSSDSVDIEDQEERMVKQECIKVESQTHDYKGNSEVDKDTKSQICEKEESN
TVTLQDSTISSELLQVSGDVSNTSEGKSKTDKCAEPSFSNPSVPESNLRTRNANKRLHKR
DSLENSVGESSKTETSDISLLSEKTLQTLECQHKRSKRVRRSKGCDCCGEKSQPQEKSFI
GLKNTENYDVKVSETKKTDVQTPVTISETSKADLYSEVKLLDEHHSVNFHLDLKEENDTI
NDSLIISETELKENTIQDFIPSEMVNFKEETCDRDSEVAISLESQEPSNKKCKTIDPCLG
DFKDISLECLTLETEEKKPEAIPKKELSIIENLVNVEANAELNPGEVDAMELNAENDKSE
ASFSKQKSVKTDISEEEVTEKNSQSTDAPEELSADEAITVEFNSGIGHSDDTTPVKVSAQ
LEISEQIAVGELDRGSDESDPGSSGEMNAEMENCEETVIGEVTTETDRVNETEDEDLTTK
ASKPIEAETKRLNVEIDSFVPNTLEMSTEEGKVDSNKTETNIEPNKFEETKLGDSQMVVG
NDGILPEVHHISEKVEETPQPLTAETAVSELVSEDNNTSPQKLKDVDPLLMSANDSPSGM
QTRCVWSPLASPSTSILKRGLKRPQEDESSSPVHKVRRVSFADPIYQAGLADDIDRRCSI
VRCHSSNSSPVVKSVKTSPTVQSKHNTTSAKGFLSPGSRSPKFKSSKKCLIAEMAKESVP
CPTESVYPALVNCVAPVDIILPQITSNMWARGLGQLIRAKNIKTIGDLSTLTASEIKTLP
IRSPKVSNVKKALRVYHEQQVKSRGLEEIPVFDISEKTVNVMENKSISPDEERLASDLID
PVALETPLSKNLVAQISALALQLDSEDLHNYSGSQLFEMHEKLGSMANSIIKNLQSRWRS
PAHENSI
NT seq
7404 nt
NT seq
+upstream
nt +downstream
nt
atgacggccccgggccacagccccttcgtgccgctgttggagactttggaagacccttcc
gcctcccatggagagcagaccgacgcttacctgactctgaccagtcgtatgactggagaa
gatggaaaagaaatcattatagaaattgagaagaaacttcctcagctattcagagtttta
aagactcacattgccagtcaaaactcagagctcagtagtgctgctctgcaggccttgggg
ttttgcttatataatccgaaaattacctctggattatcagagacaaatattcaagaactg
ctttcaaaactgaatgatattgttaagaattcagataaaaatgtacgtactagggcactt
tgggtgatatccaaacagacgtttcccactgaagttgttggcaaagtagtatcgagtata
attgattcattagaaatagtctttaatagaggagagatgcattctgctgttgtggattat
gaagcattaaatgtcatcataaggctaattgaacaagccccaattcaaatgggagaagag
tcaattagatgggcaaaattggtcataccattagtggttcattcggcccaaaaggtacat
ttgcggggagctactgctctagagatgggaatgccgttgttacttcagaaacaacaagaa
atagcatctatcacagagcagcttatgactaccaaattactttcggaactccagaagcta
tttatgagtaaaaatgagacttacgtgttaaaattatggcctttgtttgtcaaactgctt
gggaagaccttgcatcgaagtgggagtttcatcaattctctattacagctagaagaactg
ggatttcgtagtggagcacccatgattaaaaaaatagcttttattgcttggaagagttta
atagataattttgctttaaatccagaaatactatgtagtgcaaaaagactgaagttgtta
atgcagcctttgagttctatccatgtgagaacagaaactctagcgctgacaaaactagaa
gtctggtggtatttattgatgagactaggacctcatcttcctgctaattttgaacaggtc
tgtgtgcctctgattcaaagcacaataagcattgattctaatgcttcacctcaaggcagt
tcatctcgtgtagctacttctccagctttaaatcctgcgacccctgtacacaaaggtgct
tctccgtatggaactccccggatgaacttgagttcaaattttggtggaatggccacaatc
ccctctatacaagttttggggcttgaaatgttgcttcattttttgttgggtccagaagtc
ttgagttttgctaagcaaaacaaacttatgctgagcttagagcgacttgaacatccgtta
atcagcagctcttcttttttttccaaacatgcaaatacatttatcactgctgttcgtgat
agctttgttgcaattagaaaagatgcttctgatgcaattgtcaatgctatttggaaggag
ctagttagcttggtgaagtcagttattgaatctggtaacaaaaaagagagaccaggttct
gaagttttgactcttctattaaaatctttggaaagcatagtgaagtcagaagtatttcct
gtattgaaaacactggttctcatggaaattacaattaaaggacttcctcagaaagtatta
ggttctccagcatatcaggttgctaatatggatattcttaatgggactcctgctttgttc
ttaattcagttaattttcaataataatctgttgacatgtggtgtagaagatgaaaggttt
tttctcaacctggaaacactggtaggctgtgttctttctggtccaacttcaccactagct
ttcagtgactctgtcttaaatgttattaatcaaaatgcaaagcagttggaaaacaaggag
catctttggagaatgtggagtattatagtcaccccattaactgaattgataaatcagacc
aatgaagtgaatcaaggtgatgccttagaacataattttagtgccatctattgtgcactg
actttaccaataaaccatattttttcagcacaaaaaattccagcggccaccatgaagacc
ttacttaaaacttggtcagaattatatagagcatttgctcgctgtgcagctttggtggca
actgcagaggagaatttgtgctgtgaggaactttcttccaagataatgtccagtttggaa
gatgaaggcctttcaaatttattgttcttggataggatcactcatattattactgtaatg
gttgattgcatcgacttttcaccatataatattaagtatcagcccaaaattaaatcacca
cagagaccttcagattggtccaaaaagaagaaggagcccttgggaaaattggcttcttta
tttaaacttattgtgagagtgatctattctttccacactctgagcctcaaggaagtacat
tctgatactctcctcactattggcaactcaatcaccagcattctttccaatgtacttgga
catatttctttgccttttatgatccgaaaaatatttgcaactttaacaagacctctggca
ttattttacgaaaactcaaagtttgatgaagttcctaaagtatatagttgtatgaacaac
aagttagaaaagctactaggagaaattattgcttgtctacacgtcagctacactgggact
tatgacagtgaacttcttgaacagatctcgccattattatgcatagtattttcacacaag
aataaacagattagaaaacaaagtgctcagttctggaatgccacatttgctaaagtgacg
atgttgatttatcctgaggagttaaaaccaatactaaaacaagccaaacaaaaatctctg
cttctgttgcctggtttggaaaatgttgaaattattgaggaatccagtggaccatattca
gatacaacagaaaattcacagttaaatatgaagataagtggcatggaaagaacctcaagt
ggaaaaagagattcttttttggcacaaacaaaggatacaaaagacaatatgaaaccacca
gctaaattgaaactagagtcttcgactccaaaagcaaagagtgaaatgcctttggaagaa
gaaaagtctactgactttgtgtttatacctccagaagaaaaagaaacaaaggaaaggata
ctaactgaacaccagaaagaagtactcaaaacaaagaggtgtgatattcctgccatgtat
aataatctggatgtttcacaagatactttattttctcagtatggtcaggaagagtctatg
gaaattcctactttaactgaaaaatccaaggaagattccaagatgatatttaaggaggaa
caaaaggagagtgacattgtcattcctcaacatgtcatggaaaactgtggtatggatgaa
caccttgaaaaggcttccctttcgaataatgagtgtggttctattgaggaaaccaatcca
gaaatactgagcagtaatgatgccaggaaaaaggctttaattgtatcaaagaagacgcca
actgaatgtgcatctagtacagaaaatacatttggtgtcagcagtagctcggtttctaat
gccactatttctggaactcctcccccacagcctgcaagtcgaaggcaatcctttattact
ttggagaagtttgatggctcagaaaatagaccctttagtccatcccccttgaataatatg
tcatcagctgttatagtgaaaaataaccaggaaggcacggctaaaacagataatccacca
aaagcaaagaaaagagaagtggctctttcaaaatctgactctgcaaaaacagtgcatggg
attaagagatcagtccgaaggtcgagtaagcctgaaccaatagggaataaaaagtctaag
tccttgatgagatctgatcaggagaaaagtactcgggaatctgttgatggcatggtagcc
ttagaaaataacccacctggtttgcttaatcaaacagaatgtgcattagataatcaggtt
catctctctgagtcttcagtggagtatgaggatacgatgcttaaaccaacaatagaaaat
actatactattagaaaacagtactgtagaggagaaaaccttagaaattaatttggaatcc
aaagaaaacacacccccagccataataacaacagatcaaacagtaaatgaagatagtcat
gttcagataactccaaatcataaaacccttagacgatctttaaggcgacgttcagaaaca
gcagagccaaccactgatagccaagataaagaaaataatcaaaaaagggaaagacgtaag
gaagaagaaaagactctgcagaggagtccattgcatgtaaaagatgatgttttacctaag
caaaaattgatttctgaacaaactgtacaggaaaatttaattgagaaaggaaataattta
catgagaagacttttggggaaaccagcgctaatgctgaaatcgatgaaaatagaagaaag
ccagatcttgagactactaaatctgagggagatggtgcccaggacattgcagataaatcc
tctgagaaaacagtaaggggacgaacacggtatcaaacaagaagagcatcccagggttta
ctttccagcattgaaaactcagaatctgatagttctgaggcaaaagaagaaggttctaaa
aagaaaagatctggaaaatggaaaaacaaaagcagtgacagtgttgacattgaagatcaa
gaagagagaatggtaaaacaggaatgtataaaggttgaaagtcagacacatgattataaa
gggaattctgaagtagacaaagatacaaaatctcagatctgtgaaaaagaagaaagtaat
actgtaactcttcaagattctacaatatcttcagaattattacaagtttctggtgatgta
tcaaatacctccgagggaaaaagtaaaactgacaaatgtgcagaaccttccttttcaaat
ccttctgtaccagaatcaaatctaaggactagaaatgccaataaaagattgcataagcga
gattctctagaaaatagtgtgggtgaatcctcaaaaacagaaacatcagacatttctttg
ctttctgagaaaactcttcaaacacttgaatgccaacacaagagaagtaagagggtgagg
agatctaaaggttgtgattgctgtggagaaaaatcacaacctcaggaaaagtcattcatt
gggttaaagaatacagagaattatgatgtaaaagtcagtgaaacaaaaaagacagatgtg
cagacacctgtaactatatcagaaacttctaaagctgatctgtattcagaagtaaaactt
ttagatgagcatcatagtgtgaattttcatttggatctcaaggaggagaatgatactatt
aatgattcattaattatatctgaaactgagttgaaagaaaatactattcaagactttatt
ccttctgaaatggtaaattttaaagaagaaacttgtgatagggattctgaggtagcaata
tctcttgaaagccaggagccatctaataaaaaatgtaaaactattgacccatgtttgggt
gacttcaaagatatttcactggaatgtttaactttggagaccgaagaaaaaaagccagag
gctatccccaaaaaggaattgagtattatagagaaccttgttaatgttgaagcaaatgca
gaattgaatccaggagaagtagatgctatggaattgaatgcagaaaatgataaatctgaa
gctagcttctctaaacaaaagagtgtcaaaactgatatttcagaggaagaggtaacagag
aaaaacagtcagagtacagatgcacctgaagaactcagtgctgatgaagcaataactgtg
gaatttaattcaggtattggtcattctgatgataccacacctgtaaaagtgagtgctcag
ttagagatttctgaacaaatagcagttggggaactagacagaggaagtgatgaatctgat
ccaggctcatctggagaaatgaatgctgaaatggaaaattgtgaagaaacagtgattggt
gaggtgactactgaaactgaccgtgtcaatgaaacagaggatgaggacttaactaccaaa
gcctctaagcctatagaagctgaaacaaagagattgaatgtagaaatcgatagttttgtt
cccaacacacttgagatgagcactgaagaaggaaaggttgactctaataaaactgaaaca
aatattgaacctaataaatttgaggaaacaaaattaggtgacagtcagatggtagtggga
aatgatggaattttaccagaagttcaccatatttcagagaaagtggaggagacaccacaa
cctctgacagctgaaacagctgtttctgaactggtatcagaagacaataatacatctcct
caaaaattaaaggatgttgatcctttactcatgtcagcaaatgacagtcctagtggcatg
cagacacgctgtgtctggtctcctttggcttctccatccaccagcattttaaagagagga
ctaaaaagaccccaagaagatgaaagctcatcacctgttcacaaggttcgccgtgtctcc
tttgcagatcctatataccaggcaggattggcagatgacattgataggcgatgctctatt
gttaggtgccattcttcaaatagttctcccgtagtaaaaagtgttaaaacttcacctact
gtgcaatctaagcataatactacttcagccaaaggatttctgtccccaggatcacgtagc
cctaaatttaagagctcaaagaagtgtttaattgcagaaatggctaaggaatctgtgcca
tgcccaacagaaagtgtttaccctgctttggtgaactgtgtagcaccagttgacatcatt
ttacctcagattacgtccaacatgtgggcaagaggactgggacaactcattagagccaag
aatataaaaacaattggtgatttgagtactcttacagcatctgaaataaaaactcttcct
atccgttctccaaaagtgtctaatgtaaaaaaggctctcagagtatatcatgagcagcag
gtgaagtctcgtggactagaagagattccagtttttgatatttccgaaaaaacagtaaat
gtaatggaaaataaatctatttctcctgatgaagaaagacttgcctcagatttaattgat
cctgttgctttagagactccgttatctaaaaatcttgtggcccagattagtgcacttgct
cttcaactagattcagaagatctccataattattcaggaagccagctatttgaaatgcat
gagaaacttggtagcatggcaaactctataattaaaaatctgcagtcacgttggaggtca
ccagcccatgaaaattctatttag
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