Pseudorca crassidens (false killer whale): 137227316
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Entry
137227316 CDS
T12027
Symbol
RAPGEF1
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
pcrs Pseudorca crassidens (false killer whale)
Pathway
pcrs04015
Rap1 signaling pathway
pcrs04510
Focal adhesion
pcrs04722
Neurotrophin signaling pathway
pcrs04910
Insulin signaling pathway
pcrs05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
pcrs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
137227316 (RAPGEF1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137227316 (RAPGEF1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
137227316 (RAPGEF1)
09156 Nervous system
04722 Neurotrophin signaling pathway
137227316 (RAPGEF1)
09160 Human Diseases
09162 Cancer: specific types
05211 Renal cell carcinoma
137227316 (RAPGEF1)
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Motif
Pfam:
RAPGEF1_N
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
137227316
NCBI-ProteinID:
XP_067598991
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Position
7:4995016..5135996
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AA seq
1238 aa
AA seq
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MGNAIEKQKPLKRSHLCPWKQDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKPAEVSVK
IPEKPVNKEATDRFLPEGYPIPLDLEQQAVEFMSTSAVASRSQRQKNLSWLEEKEKEVVS
ALRYFKTIVDKMAIDKKVLEMLPGSASKVLEAILPLVQSDPRIQHSSALSSCYSRVYQSL
ANLIRWSDQVMLEGVNSEDKEMVTTVKGVIKAVLDGVKELVRLTIEKQGHPSPTSPVKPS
SPACKPDGQSELPLTDREMEILNKTTGLSQSSEGLPDSTDEEVAPPKPPLPGIRVVDNSP
PPALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINRQDFDVDCYAQRRLSGGSHSYG
GESPRLSPCSSIGKLSKSDEQLSSLDRDSGRCSRNTSCETLDHYDPDYEFLQQDLSNADQ
IPQQVACNLSPLPESLGESGSPFLGHPFQLPQGSCPQPEGPSAPGQQMDVPPALPEKKRR
SAASQTGDSSGCRASYERHPSQYDNISEEDLQNPASVQSVPFTPFAAILPFQQGGSSASV
EFVGDFTVPESTGDPEKPPPLPEKKNKHMLAYMQLLEDYSEPQPAMFYRTPQKEHIYQQK
NKLLMEVYGFSDSFSAGDAPQELAPPPALPPKQRQLQASYAASSFSSVSYCVQQTKVAFT
PEDGSATQGISVSVSNSFLSRHGNLPVPSYKSVFRSYSQDFVPHSQASVQPFLPSTSSSS
PHFPPVHQSQSSDLAVPTVASPPPSTLDGPLSSSQESSFHGNTVCLPSETSFTDSPQTPS
ESPASKDGHPRDASSAGSAPGKESRDGGDRAPKSPDAPEAQSEEEVDELSLIDHNEIMAR
LTLKQEGDDGPDVRGGSGDILLVHATETDRKDLVLYCEAFLTTYRTFITPEELIKKLQYR
YEKFSPFADTFKKRVSKNTFFVLVRVVDELCLVELTEEILKLLMELVFRLVCNGELSLAR
VLRKNILDKVDQKKLLRCANSDQPLAARGVAARPGTLHDFHSHEIAEQLTLLDAELFYKI
EIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSIIMLQEKAQDRERLLLKFIKIMKH
LRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLAEYCTLIDSSSSFRAYRAALSEVEP
PCIPYLGLILQDLTFVHLGNPDYIDGKVNFSKRWQQFNILDSMRCFQQAHYDIRRNDDII
NFFNDFSDHLAEEALWELSLKIKPRNITRRKTDREEKT
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatgctattgaaaaacagaagcccctgaaacgaagccatctgtgcccctggaaa
caagactctcagcgttctcatctctcctccttcaccatgaagctgatggacaaattccac
tcacccaaaatcaagagaacgccatcaaagaagggaaaaccagctgaggtgtctgtgaag
attccagagaagcctgtgaacaaagaggcaacagacagatttctaccagagggctaccct
atccccttggatctggagcagcaggcagtagaatttatgtccaccagtgctgtggcttcc
aggtctcaaaggcagaagaacctgagctggctggaagagaaagagaaggaggttgtcagt
gccttgcgctactttaagaccattgtggacaaaatggctattgataagaaggtactggag
atgcttccagggtctgccagcaaggtgctggaggccatcttacccctggtgcagagcgac
cctcgaattcagcacagctcagccctctcctcctgctatagccgagtgtaccaaagtctc
gccaacctcattcgttggtctgaccaagtgatgctagaaggtgtgaactcagaagataaa
gagatggtgacaaccgtgaagggggtcatcaaagccgtgctggacggagtgaaggagctt
gtcagacttaccatcgagaagcaggggcatccgtctccaacaagcccagtgaaacccagt
tccccagcctgcaaaccagacggccagtctgagctccccttgacagatcgagagatggag
attctaaacaagacgaccggcctgtcgcagtcgtccgaggggctcccagattccacggat
gaagaggtcgcgccccccaaaccccccttacctggcattcgtgtggttgataatagtcct
ccaccagcattgccaccgaagaagagacagtcggctccatcccctacccgagtggccgtc
gtggcccccatgagtcgagccaccagtggctccagtttgcctgttggaattaataggcag
gattttgacgtggactgttacgcacagagacgactttcgggcggcagccactcatatggc
ggcgagtcgccccgcctgtccccctgcagcagcataggcaagctcagcaagtcggacgag
cagctgtcgtctctggacagggacagcgggcggtgctcccggaacacaagctgtgagact
ctagatcattacgaccctgactacgaattcctccagcaagacctctctaacgcagaccag
atacctcagcaagtggcctgtaacctcagcccgttgccagagtccttgggggagtctggg
tctccgtttctcggccatcctttccagttgcctcagggcagctgtccccagccagagggg
ccctcggccccagggcagcagatggatgtgccgcctgctcttcccgagaagaagcgcagg
agtgcggcctcccagacgggggacagctctggctgcagggcgtcctacgagcggcatccc
tcgcagtacgacaacatctccgaggaggacctgcagaacccagcctcggtccagtccgtc
cccttcacgccctttgctgctattcttccctttcagcaaggaggttcctcagcctctgtt
gaatttgtgggtgatttcactgttcctgaatcaacgggtgacccagaaaaacctcctcct
ctaccagagaagaaaaacaaacacatgctggcctacatgcagctgctcgaggactactcg
gagccgcagcccgccatgttctaccggacgccgcagaaggagcacatctaccagcagaag
aacaagctcctcatggaggtgtatggcttcagcgactctttcagcgccggggatgccccg
caggagctcgccccgccccccgccctgccccccaagcagcggcagctgcaggcctcctat
gctgcttcttccttctcctctgtctcctactgtgtccagcaaactaaagtggccttcact
cccgaggacggcagtgccactcagggcatcagtgtgtccgtctctaactcctttctcagc
cggcacggcaacttacctgtgccctcgtataaatctgtgtttaggtcctactcccaggat
ttcgtgcctcacagccaagcttccgtccagcctttcctcccgtctacctcctcttcctct
ccacatttcccacctgtccaccagtctcagagctctgacttagcggtgccaaccgtagcc
agtccgcctcccagcaccctggacgggcctctttcatcttctcaggagagcagctttcat
gggaacactgtctgccttccttccgaaacctctttcactgactcgccccagacgccttcg
gaatcaccagcttcgaaggacggacatcccagagatgcctcgtcagccggcagtgcacct
gggaaggaaagcagggacggcggggacagggccccaaagtcaccagatgctccagaggct
cagtcggaggaggaagtggacgagctgtccctcattgaccacaatgagattatggcaagg
ctgacgctcaagcaagagggcgacgacggaccagacgtccggggaggatctggtgacatc
ctactggtccacgctactgagacggacaggaaagatctggtgttgtactgcgaggccttc
ttgaccacctacaggaccttcatcacccctgaggagctcatcaagaagctgcagtacagg
tacgagaagttctctccttttgccgacacattcaagaagcgcgtcagcaagaacacgttc
ttcgtgctggtacgggtggtggacgagctctgcctagtggagttgacggaagagatcttg
aagctgctgatggagctggtctttcgcctggtgtgcaacggggagctcagtctggcccgt
gtgctccggaagaacatcctggacaaggtggaccagaagaagctgctcaggtgtgccaac
tccgaccagcccctggcggccaggggcgtagcagccaggcccgggaccttgcatgacttt
cacagccatgagatagctgagcagctgacactgctggatgccgagctcttttataagata
gagattcctgaggttttgctttgggcaaaagagcagaacgaggagaagagccccaacttg
acccagttcacggagcacttcaacaacatgtcctactgggttcggtcaatcatcatgtta
caggaaaaggcccaagacagggaacggctgctcttgaagttcatcaagatcatgaagcac
ttacggaagctgaacaacttcaactcctacctggccatcctctcagcgctggactcagcc
cctatccgcaggctggagtggcagaagcagacctcagagggcctggcggagtactgcacg
ctgattgacagctcatcctccttccgcgcctaccgggccgccctctcggaggtggagccg
ccgtgcatcccatacctggggctcatcctgcaggacctcaccttcgttcacctgggaaac
ccggactacattgacgggaaggtgaatttttccaaacggtggcaacagttcaacatcctg
gacagcatgcggtgcttccagcaggcgcattatgacatccggagaaacgatgacatcata
aacttcttcaacgacttcagtgaccacctggcggaggaggcgctatgggaactctctctg
aaaatcaaacccaggaacataacacggaggaaaacagaccgggaagagaagacctag
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