Pseudorca crassidens (false killer whale): 137229060
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Entry
137229060 CDS
T12027
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
pcrs Pseudorca crassidens (false killer whale)
Brite
KEGG Orthology (KO) [BR:
pcrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcrs04131
]
137229060 (VPS50)
Membrane trafficking [BR:
pcrs04131
]
Protein recycling
Others
EARP complex
137229060 (VPS50)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
MJ1674_2nd
Motif
Other DBs
NCBI-GeneID:
137229060
NCBI-ProteinID:
XP_067602500
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All DBs
Position
8:complement(50693955..50830963)
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AA seq
964 aa
AA seq
DB search
MQRIKSLMTRQGLKSPPESLSDVGAIESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSTDSFDIVKYELEKLPPVLNLQDLEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDSEDTTSASEG
SNMMGTEETNFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIIS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFMEQSRSPSVSPNKQPSSTSSKMVTLFEQYCSGGNPFEIQADHKDEETEDVLA
SNGYESDEQEKSAYQEYDSDSDVPEELKQDYVDEQTGDAPVKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSL
ESTGLGLSSSRLRTTLNRIQESLIDLEVSADPTATLTAAEERKEKVPSPHLSHLVVLTFG
DTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPI
YWIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNTRLNEVSKRVRIP
LPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLSAIDDID
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagaatcaaatctcttatgacccggcagggtctgaaaagtcccccagagagcctc
agtgatgttggtgccattgagagtctccgggtccctggaaaggaggaatttcgagaactt
cgagaacaacctagtgatcctcaagctgaacaagaactaattaatagtatcgaacaagtg
tatttttctacggactcatttgatattgttaaatatgagctggagaagctccctcctgtt
ctcaatttgcaagacttagaggagtacagagacaaattaaaacaacagcaagctgcagtc
tctaaaaaagtagcagatttaatccttgaaaaacagcctgcttatgtaaaggaacttgaa
agagttacctcattacagacaggtcttcagttagctgctgttatctgcacaaatgggagg
agacacttgaatattgcaaaggaaggttttactcaagctagtttaggccttcttgcaaat
caaaggaaacgtcagttgctgattggacttctgaaatctctgagaactataaaaacattg
caaagaacagatgtccgcttaagtgaaatgctggaggaggaagactatccaggagctatt
cagctgtgcctggaatgtcagaaagctgctagcacttttaaacattacagttgcataagt
gaactgaattcaaagcttcaagatactttagagcaaattgaggaacagttggatgttgct
ctgtccaaaatctgcaagaattttgacattaaccattataccaaggttcaacaagcttat
cgacttcttggaaaaacacagacagcaatggatcaacttcatatgcacttcacccaagcc
attcataatactgtgtttcaagttgttcttggttatgtggaactatgtgcaggaaacaca
gatacaaaattccaaaagctgcaatataaggatctctgtacgcatgttacaccagacagc
tatattccatgccttgctgacctgtgcaaagcactgtgggaggttatgctcagctattac
agaactatggaatggcatgaaaagcatgacagtgaagatactacttctgcttctgaaggg
agtaatatgatgggtactgaagaaacaaattttgatcgtggctacataaaaaagaaatta
gaacatggacttacacgaatatggcaggatgttcagctaaaagtaaaaacctacttgctt
ggaactgatttgtcaatattcaaatatgatgacttcatctttgttttggatataatcagc
aggttgatgcaagttggagaagaattctgtggtagcaagtctgaagttttgcaagagtct
attagaaaacaaagtgtcaattattttaagaactaccatagaacacggcttgatgaactg
agaatgtttctagaaaatgagacctgggaactttgtcctgttaagtcaaatttcagcatc
ttgcagcttcacgaatttaaattcatggaacagtcacgttctccatcagtttcacccaat
aagcagccatcctcaacttcctcaaaaatggtaaccttgtttgagcagtactgtagtggt
gggaatccatttgaaattcaggctgaccacaaagatgaagaaacagaagatgtcctggct
tctaatgggtatgaatctgatgaacaagaaaaaagtgcctatcaggagtatgacagtgac
agtgatgttcctgaggaactaaaacaagattatgttgatgagcagacaggcgatgctcct
gtgaaaagcgtttctcgagagactctaaaaagcaggaagaaatcagattacagtctaaat
aaagtgaatgcacccatcttaacaaatacaacactgaatgtaataagacttgttggtaaa
tatatgcagatgatgaacattcttaaaccaattgcttttgatgttatccatttcatgtct
cagctatttgattattacttgtatgcaatatataccttttttggtcggaatgattcattg
gaatccacgggactaggtcttagcagtagtagactaagaacaactctaaacagaatacaa
gaaagcctcattgatctggaagtttcagctgatcctactgccacgctcacagcagcagaa
gagagaaaggagaaggtaccgagccctcacctcagtcacctagtggttttgacatttggg
gatacattgtatgggttggcggaaagagtggtagccacagaatccttggtattcttggct
gaacagtttgagttccttcagccacatctggatgctgtgatgcctgcagtcaaaaaaccc
tttcttcagcagttttattctcagaccgtctcaacagccagtgaactacgcaaaccaatt
tactggattgtagctggtaaagccattgattatgaacagatgctcctcctaatggctaat
gtgaaatgggatgtaaaagaaattatgtcacagcacaacatatatgtagatgcactgtta
aaggaatttgagcagtttaacacgaggttaaatgaagtttctaagagagttcggataccc
ttgcctgtgtctaatatactttgggaacattgtatacgtctggctaatagaacaattgtg
gaaggatatgccaacgtcaagaagtgtagtaatgagggtcgtgccttgatgcaattggat
tttcagcagtttttaatgaaacttgaaaaactaacagatattagaccaattccagataaa
gaatttgtggaaacctatattaaagcttactatctaactgagaatgacatggaacgctgg
atcaaagagcatagggagtattcgacgaagcagctgaccaatctggtaaatgtttgcctg
ggatcccatatcaataagaaagcaagacaaaaacttctctcagctatagatgatatagac
agacccaaaagataa
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