Pseudorca crassidens (false killer whale): 137230577
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Entry
137230577 CDS
T12027
Symbol
ATG16L2
Name
(RefSeq) protein Atg16l2 isoform X1
KO
K20868
autophagy-related protein 16-2
Organism
pcrs Pseudorca crassidens (false killer whale)
Pathway
pcrs04140
Autophagy - animal
pcrs04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
pcrs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
137230577 (ATG16L2)
04140 Autophagy - animal
137230577 (ATG16L2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcrs04131
]
137230577 (ATG16L2)
03029 Mitochondrial biogenesis [BR:
pcrs03029
]
137230577 (ATG16L2)
Membrane trafficking [BR:
pcrs04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
137230577 (ATG16L2)
Others
Specific organelles associated proteins
Auto phagosome
137230577 (ATG16L2)
Mitochondrial biogenesis [BR:
pcrs03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
137230577 (ATG16L2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG16
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
EIF3I
WDR55
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
DSE1_N
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_VPS8
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_NWD2_C
Beta-prop_SCAP
WD40_RFWD3
ASA1
Rod_CreS
Motif
Other DBs
NCBI-GeneID:
137230577
NCBI-ProteinID:
XP_067606349
LinkDB
All DBs
Position
9:51545975..51559066
Genome browser
AA seq
620 aa
AA seq
DB search
MAGPSDPGVPAARWKRHIVRQLRQRDRTQKALFLELVPAYNRLLEKAELLAQFSEKLQPE
PTDVTRALHQGGWEEESEPDSDGVPSPAALRVKWQEEEEGLRLLCGEMAYQVVEKSAALG
TLESQLGERQSRLAALEARVAQLQEAREKEEGQVDARRALNAAQRAAYEALRVHVGHQEA
ALRRLEEEARDLLDRLVRRKARAAAERNLRNERRERAKQARVSQELKKAAKRTVSISESP
DTLGDGIREEADTLALAAEPAFLESEAGEKWKRPFRSASATSLTLSRCVDVVKGLLDFKK
RRGHSVGGAPEQRYQSIPVCVAARLPTRAQDVLDAHLSEVNAVRFGPSSSLLATGGADRL
ILLWNVVGGRLEANQTLEGAGGSITSVDFDPSGSQVLAATYNKAAQLWKVGEAQSKETLS
GHTDKVTAAKFKLTMHQAVTGSRDRTVKEWDLGRAYCSRTINVLSYCNDVVCGDHVIISG
HNDQKIRFWDSRGPRCTQVIPVQGRVTSLSLSHDQLHLLSCSRDDTLKVIDLRVSNVRQV
FRADGFRCGSDWTKAVFSPDRSYALAGSWDGALYIWDVDTGKLESSLRGPHCAAVNAVAW
CYSGSHVVSVDQARKVVLWH
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcccagcgaccccggcgtccccgccgcccgctggaaacgccacatcgtgcgg
cagcttcgacagcgagaccgaacgcaaaaggccctcttcctggagctggtgccggcctat
aaccgtctcctagagaaagcggagctgctggcccagttctcagagaagctgcagccagag
cccaccgatgtcactcgggctctccaccagggcggctgggaggaggagtcagagcctgac
tcagacggagtcccatcaccagcagctctgagggtgaagtggcaagaggaagaggagggg
ctccggctgctgtgtggagagatggcctaccaggtggtggagaagagcgcagccctgggc
accctggagtcacagctgggggagcggcaaagcaggctggcagctctggaggcccgcgtg
gcgcagctgcaggaggcgcgggagaaggaggagggacaggtggatgcgcggcgcgcgctg
aacgcggcacagcgggcggcctatgaggcgctgcgcgtgcacgtcgggcaccaggaggcg
gctctgcgcaggctcgaggaggaggcacgcgacctgctggatcggctggtgcggcgcaaa
gcgcgcgccgcagccgagcgcaacctgcgcaacgagcgccgcgagagggccaaacaggcg
cgggtgtcccaggagctgaagaaggcagccaagcggacagtgagcataagcgagagccca
gacacattaggcgatgggatcagagaggaagcagacactctggctctggcagctgagcca
gcgttcctggagagtgaggctggtgagaaatggaagaggcccttcaggtctgcctccgcc
acctccctgacgttgtcccgctgtgtggatgtggtgaaggggcttctggatttcaagaag
aggagaggccactcagttgggggagcccctgagcagcgataccagagcatccctgtgtgt
gtggccgcccgacttcctacccgagctcaggatgtgctggatgcccacctctccgaggtc
aatgctgttcgttttggccccagtagcagcctcctggccactggaggggctgaccgcctc
atcctcctctggaatgtcgtgggagggcgcctggaggccaaccagacccttgaaggagct
ggcggcagcatcaccagtgtggactttgacccctcgggctcccaggtactggcagctact
tacaataaggccgcccagctttggaaggttggggaggcacagtccaaggagacactatct
ggacacacagacaaggtaacagctgccaaattcaagctaacgatgcatcaggcggtgacc
gggagccgggaccggacagtgaaggagtgggacctcggccgagcctactgttccaggacc
atcaatgtcctttcctactgtaacgatgtggtgtgtggggaccatgtcatcattagtggt
cacaatgaccagaagatccgcttctgggacagcaggggaccccgctgcacccaggtcatc
cctgtgcagggccgggtcacctccctgagcctcagccacgaccagctgcatctgctcagc
tgttcccgagacgacacgctcaaggtcatcgacctgcgtgtcagcaacgtccgccaggtg
ttcagggctgatggcttcaggtgcggttctgactggaccaaagctgtgttcagcccagac
agaagctacgcactggcaggttcctgggatggagctctttacatctgggatgtagacact
gggaaactggagagtagccttcggggaccccattgcgctgccgtcaatgccgtggcctgg
tgctactctgggagccacgtggtgagcgtggaccaagccaggaaggttgtgctctggcac
tag
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