Pseudorca crassidens (false killer whale): 137232302
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Entry
137232302 CDS
T12027
Symbol
SIN3A
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
pcrs
Pseudorca crassidens (false killer whale)
Pathway
pcrs04350
TGF-beta signaling pathway
pcrs04919
Thyroid hormone signaling pathway
pcrs05016
Huntington disease
pcrs05169
Epstein-Barr virus infection
pcrs05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
pcrs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
137232302 (SIN3A)
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
137232302 (SIN3A)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
137232302 (SIN3A)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
137232302 (SIN3A)
09164 Neurodegenerative disease
05016 Huntington disease
137232302 (SIN3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcrs03036
]
137232302 (SIN3A)
Chromosome and associated proteins [BR:
pcrs03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
137232302 (SIN3A)
REST complex
137232302 (SIN3A)
Heterochromatin formation proteins
Other heterochromatin formation proteins
137232302 (SIN3A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
SPCC191_01
Motif
Other DBs
NCBI-GeneID:
137232302
NCBI-ProteinID:
XP_067610094
LinkDB
All DBs
Position
1:complement(122405782..122474066)
Genome browser
AA seq
1274 aa
AA seq
DB search
MKRRLDDQESPVYAAQQRRIPGSTEAFPHQHRVLAPAPPVYEAVSETMQSATGIQYSVTP
SYQVSAVPQSSGSHGPTIAAVHSSHHHPTAVQPHGGQVVQSHAHPAPPVAPVQGQQQFQR
LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGIQPQPQPPPQHPSQPSAQSAPAPAQ
PAPQPPPAKVSKPSQLQAHTPASQQTPPLPPYASPRSPPVQPHTPVTISLGTAPPLQNNQ
PVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYA
QVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVDSVRNDHGGTVKKPQLNNKPQRP
SQNGCQIRRHSGTGATPPVKKKPKLLSLKDSSMADASKHGVGTESLFFDKVRKALRSAEA
YENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLGYKESVHLETFPKERAT
EGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVS
SKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGG
TSEVIHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWRE
QNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEENAGVPVGPHLSL
AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLLFAQRGDLSDVEEEEE
EEMDVDEATGAAKKHNGVGGSPPKSKLLFSNTAAQKLRGMDEVYNLFYVNNNWYIFMRLH
QILCLRLLRICSQAERQIEEENREREWEREVLGIKRDKSDSPAIQLRLKEPMDVDVEDYY
PAFLDMVRSLLDGNIDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQ
VTDLYLAENNNGATGGQLNTQTSRSLLESTYQRKAEQLMSDENCFKLMFIQSQGQVQLTI
ELLDTEEENSDDPVEAERWSDYVERYMNSDTTSPELREHLARKPVFLPRNLRRIRKCQRG
REQQEKEGKEGNSKKTMENADSLDKLECRFKLNSYKMVYVIKSEDYMYRRTALLRAHQSH
ERVSKRLHQRFQAWVDKWTKEHVPREMAAETSKWLMGEGLEGLVPCTTTCDTETLHFVSI
NKYRVKYGTVFKAP
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgacgtttggatgaccaggagtcaccggtgtatgcggcccagcagcgtcggatc
cctggtagcacagaggcttttcctcaccagcaccgggtgcttgcccctgcccctcctgtg
tatgaagcggtgtctgagaccatgcagtcagccacaggaattcagtactctgtgacacct
agttaccaggtttcagccgttccacagagctccggcagtcatgggcccaccatagcagca
gttcatagcagccatcatcacccaacagctgtgcagccccatggaggccaggtggtccag
agtcatgctcatccagctccaccagttgcaccagtgcaggggcagcagcagtttcagagg
ctcaaggtggaggatgcactatcctatcttgaccaagtgaagctgcaatttggtagtcag
cctcaggtctacaatgatttccttgacatcatgaaggaatttaaatctcagagcatcgac
actccaggagtgattagtcgtgtgtcccagctgttcaaaggccaccctgacttgatcatg
ggcttcaataccttcttgcctcctggctacaagattgaggtgcaaaccaatgacatggtg
aatgtgacaactcctggccaggttcatcagattccaacccatggcatccagccccagcct
caaccaccaccccaacatccttcccagccttcagcccagtcagccccagctcctgcccag
ccagctcctcagcccccacctgccaaagtcagcaagccttcccaactacaagcacatact
ccagccagtcagcagactcccccactcccaccatatgcgtccccacgttctccacctgtc
cagcctcatacaccagtgacaatctcgttgggaacagccccgcccttgcagaacaatcaa
cctgtggagtttaaccatgccatcaactatgtcaataagatcaagaacaggttccagggc
caaccagacatctacaaagcgttcctggagattttgcacacataccagaaagagcagcgg
aatgccaaggaagctggaggaaactacactccagcgttgactgagcaggaggtgtatgcc
caggtggctcgcctttttaaaaatcaggaagacctgttatcagagtttggacagttccta
ccagatgccaacagctctgtgcttttaagcaaaacaactgctgagaaggtcgattctgtg
agaaatgaccatggaggcactgtgaagaaacctcaactgaacaacaagccgcagaggccc
agccagaatggctgccagatccgcaggcactctggaacgggagccacccctccagtgaag
aagaaacccaaactgctcagcctcaaggattcttctatggcagatgccagcaaacatggt
gtaggaacggaatcattattttttgataaggtccgaaaggctctgcggagtgcagaggcc
tatgaaaatttcctgcgctgtcttgttatctttaaccaggaggtgatctctcgggcggag
cttgtgcagttagtctctccattcctggggaaattcccagaattgtttaattggtttaaa
aactttctgggctataaggagtctgtacatctggaaacctttccaaaggaacgagccaca
gagggcattgccatggagatagattatgcctcttgtaaacggttgggctccagctatcga
gccctgccaaagagttaccagcagcccaagtgtacaggacggactcctctctgtaaagag
gttttaaatgatacctgggtttccttcccctcctggtctgaggactccacctttgttagt
tccaagaaaactcagtatgaagaacatatctatcgttgtgaagatgaacgttttgagctt
gatgtagttttagagactaatctggcaacgatccgggttttggaagcaatacagaagaag
ctttcccgcttgtctgctgaggaacaagccaaatttcgcttggacaacaccctcgggggc
acatcagaagtcatccatcgaaaagccctccaaaggatatatgctgataaagcagctgac
atcattgatggtctgaggaagaacccctccattgccgtcccaattgtccttaaaaggttg
aaaatgaaagaggaagaatggcgagaagctcagagaggctttaacaaggtgtggagagag
caaaatgagaaatactacttgaaatctctggaccaccaaggcatcaactttaaacaaaat
gacaccaaggtcctgaggtctaagagcttactcaacgagattgagagtatctatgatgag
aggcaagagcaggctacggaagaaaatgctggtgtacctgttggtccacacctctcactt
gcctacgaagacaaacagattctggaagatgctgctgctctgattatccaccatgtgaag
aggcagacaggcattcagaaggaggacaaatataaaatcaagcaaatcatgcatcatttt
attccagatctgctctttgctcagagaggtgatctctcggatgtagaggaggaggaagaa
gaagagatggatgtagatgaagccacaggggcggctaagaagcacaatggtgttgggggc
agtccccctaagtccaagctactgttcagtaacacagcagctcagaagttaagagggatg
gatgaagtatacaacctcttctatgttaataataactggtatatctttatgcgactgcac
cagatactctgcttgaggctgctgcggatttgttcccaggctgaacggcaaattgaagaa
gaaaaccgagagagagagtgggaacgggaagtgttgggcataaagcgagacaagagtgac
agccccgccatccagctacgtctcaaagaacctatggacgttgatgtagaagattattac
ccagctttcctggatatggtgcggagcctgctggatggcaacatagactcttcacagtat
gaagattcgctaagagagatgtttaccattcatgcctacattgcctttaccatggacaaa
ctcatccagagcattgtcagacagctgcagcacatcgtgagtgatgagatctgtgtacaa
gtgactgacctgtacctggcggaaaacaataatggggccactggaggccagctgaataca
cagacctcaaggagcctcctggagtcaacatatcagcggaaggctgagcagctcatgtca
gatgagaattgctttaagcttatgttcattcagagccaaggccaggttcagctgaccatc
gagcttttggacacggaagaggagaactcggatgaccctgtagaagcagagcgctggtca
gactatgtggagcgatacatgaattctgatactacctctcctgagcttcgtgagcacctg
gcacggaaaccagtgtttctcccacggaatctgcggcggatccggaagtgtcagcgtggt
cgagaacagcaggaaaaggaagggaaggaagggaacagcaagaagaccatggagaatgcg
gatagcctggataagctggagtgtaggttcaagctgaattcctataagatggtatatgtg
atcaagtcagaggactacatgtatcggaggaccgccttgctccgggctcatcagtcccat
gagcgggtaagcaagcggctacatcagaggttccaggcctgggtagataaatggaccaag
gagcatgtgccccgtgaaatggcagcggagaccagcaagtggctcatgggtgaggggctg
gagggcctggtgccctgcaccaccacctgtgacacagagaccctgcactttgtgagcatt
aacaagtaccgtgtcaaatatggcacagtgttcaaagccccataa
DBGET
integrated database retrieval system
