Penicillium rubens: N7525_001683 Help Entry N7525_001683      CDS       T01091                                  Name (RefSeq) uncharacterized protein   KO K10643   CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] Organism pcs  Penicillium rubens Pathway pcs03018   RNA degradation Brite KEGG Orthology (KO) [BR:pcs00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     N7525_001683  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:pcs03000]     N7525_001683    03019 Messenger RNA biogenesis [BR:pcs03019]     N7525_001683    04121 Ubiquitin system [BR:pcs04121]     N7525_001683 Enzymes [BR:pcs01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      N7525_001683 Transcription factors [BR:pcs03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     N7525_001683 Messenger RNA biogenesis [BR:pcs03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      N7525_001683   mRNA degradation factors    3'-5' decay     Ccr4-NOT complex      N7525_001683 Ubiquitin system [BR:pcs04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     N7525_001683 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  zf-RING_4 RRM_1 zf-RING_2 Baculo_IE-1 zf-C3HC4_3 NS3 zf-RING_UBOX Motif Other DBs NCBI-GeneID:  8310615 NCBI-ProteinID:  XP_061071237 LinkDB All DBs Position Unknown AA seq 1528 aa AA seqDB search MSSPSLIDSVIDDDDEFCPLCIEEFDLSDKNFKPCPCGYQICQFCYNNIKTQNEEGRCPN CRRGYDESTIQYKIPDVEEFKADLALKHRKAAAAKKKEAEKREIEASSRKNLAGVRVVQK NLVYVIGLNPTIRDENQLLQTLRGREYFGQYGEIEKIVVSKAKPGGNPNQGIGVYVTFSR KADAAMCINAVDGSGNGDRVLRAQYGTTKYCSSFLRNEQCNNRNCTFLHETGEDSDSYSR QDLSSMNTISTQRHNLPPTPSHVRSAQPIAHPMRRQPSKDDSISSRTGIPDGPALPSTAS WANKDAAIHRTRRASLSGSQASINSPRPATVNVATPAEEPKRAEKPSPISQEPPQSISQV DSQSPAAQPRSRRGTQPPKLPSPFDSLLKDINSPDFKFSFSTDDLSAEEVKLIKDYPSFI DPYGGVKRRAMREKVEQERLNREQELLQSVAAEEESREAGSLQLGGEPEEANPPRSRQTR ESHGAIQPPSQQDTADNSTVGSPVSATSHQFQGLNLAGRSLTPLQQQQLMLLKSAGNQQA GLADPLSAAALDQAAQVRQGLVHNQMAQFNALQAAQNRQSSRFSFTNEAGSKNMPNARML GQMQSSSPNPLSAPSPQHGLAASGFYASGVQGPPPGLKTAGTPPISGGGMFAQGHGFTSG LGGNGGKQDPTPELMRELLRGRTGTNVGGLQGQEAAKREFMFPFLQQHNTPPPMTPVNGL LSSFYGPQAGVMPDSGGPQKQKKKGKKHRHANTSSGGGGVVDLADPSILQARMHQVGANA TAGQALYGSQGQGGYNPSMVYGGGIIDEDFPPLGDQSKDRRPVDSFGFLKSQLPGESAAR SGTPTLPPGLPLPHAHPSSSVFQERSSSKPSSPAPMLPPGLTPNISRLNSPSQSRIGSPS RLLSPELTVGGPLTSSRVKDASQISFGSPVQKSASKARNPRKSEFNIGADFKDSPAKAAN QPQPSSATTKGSPLDFAASLPASTKAEHVPPPSSVSAVGSRPDTPQTIASRLSDSPAPRQ PRILRVVETPKTETPPIATAPSVPASVVGGIKSRSSRQSISSTSIPDTPADMGWEADCYP STSASRANSPPASSRIGSAPVRTMTKSQVKKERKQKAKEAEAKKVEIAAVNEEPVQAPIM GRKRKTKKAPTATVSTPDTPAAIGPEKASPVKPANASPVKAEPKVDATTKKTKAKETKPV REPTPPPVEEPPVQKETPVEPWRSNNTVGQLVKDSEALGKAIKDLFVERTKPLHELLAEM HKSGELDLNKSALFNPSNLSQRTDMKCTAEDYDYLQCPNELTEEDRKTLLRGEPVRIGDY FLKTRCLITPRGCVLRHLEPEEEERYLELEKNMAGISDPFMIGDDASNPSGGLEALFANP EKFNICWVDDMPTRLGATSPSSSLEAAESVIPPNVLSAMEADSSRNHDWAVANSAEFLNT TPAAVRSFAAVTAQHMLGNPGMVGTNPTLDDVAGLTNEELKELSGRSQKDLELTRKEMDS LDKKFAALLRRNKKLQQQALNFATGSDV NT seq 4587 nt NT seq  +upstreamnt  +downstreamnt atgtccagtccttccttgatcgactccgtcatcgacgatgatgacgagttctgccccctg tgcattgaagagttcgatctctccgataagaatttcaaaccatgtccttgcggatatcag atttgccaattctgctacaacaacattaaaacgcagaacgaagaaggacgatgccctaac tgtcgacgcggatacgatgaaagtaccatccagtacaagattcctgacgttgaagagttc aaggcagatctggcactgaagcaccgcaaggcggctgctgcgaagaagaaggaagccgaa aagcgggaaatcgaggcttccagtcggaagaacctggccggtgtccgtgttgtccaaaag aacttggtctacgttatcggcctcaatcctacgatccgagacgaaaatcaactacttcaa acgctccgtggacgggaatatttcggtcaatatggcgagattgagaagattgtagtcagc aaggctaagcccggcggcaaccccaaccagggaattggtgtttatgtgactttctcgcgc aaagccgatgctgcgatgtgcataaacgctgtggacggttccggaaatggcgatcgagtg ctcagggcgcaatacggaacaacgaaatattgttcgtccttccttcgcaatgaacagtgc aataatcggaactgcactttcttgcacgagaccggggaggacagcgacagctacagccgc caggacctctcatctatgaacacgatttccacccaacgccataatctcccacctaccccc tctcacgtgaggtccgctcaacccatcgcccatcctatgcgccggcaaccgagcaaggac gactcgatcagtagtcgcaccggcataccagatggtccggctctcccctcaaccgccagc tgggctaacaaagacgctgctattcaccgaaccagaagggctagcctgtctggtagccaa gcctccatcaacagcccacggcccgcaaccgtcaatgttgcgaccccagcagaagaacca aagcgagcagagaagccatctccgatttcccaggaacccccacaatccatttcccaagtc gattcccagtctcctgccgcgcaaccacgttctcgccgtgggactcaaccacccaagctg ccatcaccatttgacagtttgctaaaggatatcaactctccggatttcaagttttctttc agcacggacgacctgagtgccgaagaggtcaagttaatcaaagattacccatctttcatc gatccatatggtggtgtcaagcgcagagcaatgcgcgagaaagtcgaacaagagcgtctc aaccgcgagcaggagttgctccaatctgttgcagcggaggaggaaagccgtgaagctggc agcctgcaactcggtggcgagccagaggaagcaaaccccccacgcagtcgccagacgcgg gagtctcacggtgctatccagccgccttcgcagcaggacactgcggacaattcaactgtt ggatctcctgtctctgcgactagccatcaatttcaaggcttgaacctcgctggacgaagc ttaactcccttgcagcaacaacagttgatgctactcaagtccgccggtaatcaacaagct ggcttggctgaccctctcagcgctgccgctctagaccaagccgcccaagtccggcaaggc cttgtgcacaatcagatggcacagttcaatgcgctgcaggcagcacagaaccgacagtct tctcgattctccttcaccaacgaggccggttctaagaatatgcctaatgcacgcatgttg ggccaaatgcagtcttcatcacctaaccctctttctgctccaagccctcaacatggtctt gcagcaagcggtttctatgccagcggtgtacagggtcccccgccgggactaaagaccgcc gggactcctccgatcagtggtggcggaatgttcgcccagggacatggcttcacctctggg cttggaggtaatggaggaaagcaagatccaactccggagctgatgcgcgagctactccgt ggacgaactggtacaaatgttggtggtttacagggccaggaggccgctaagcgtgagttt atgttcccttttcttcaacagcacaataccccgccccccatgactcctgtcaatggcctt ctcagctccttctatgggccccaagcgggcgtaatgcctgattctggcggcccacagaag cagaagaagaaggggaagaagcacagacacgctaacacttcctccggtggaggtggtgta gtagatcttgcggacccgagcattttgcaggcgaggatgcatcaagtcggtgcgaatgct actgctgggcaagcgttgtacgggagtcagggtcaaggtgggtacaatccctcgatggtg tatggtggtggcatcatagatgaggactttccgcctcttggggatcaatccaaggatcga cgacccgttgacagctttgggtttttgaagtctcaattgcctggcgagtcagctgctcgt tctgggactccgaccttgccacctggactgcctttacctcatgcccatccctcgtcttcg gtcttccaggaacgcagttcctctaaaccttcgtctcctgccccaatgctcccacccggc ttgacgcctaacatttcgcgactcaacagcccatcacagagccgtattggcagcccctct cgtcttttgagtcctgaactcaccgtgggcgggcctttgacatcaagccgcgtgaaggac gcttctcagatatcctttggatcgcccgtgcaaaagtccgcgagcaaggctcgtaatcca cgcaagagcgagttcaacattggagctgatttcaaagattcccctgcaaaggctgctaac cagccgcagccgagttctgccactacgaaaggtagcccactcgacttcgccgcctcgcta cccgcatccaccaaggctgagcatgtaccacctcctagctctgtttccgcagtcgggtcg cggcccgacacgccgcaaaccatagcgtctcgcctatctgactcccctgcccctcggcag cctcgtattctgcgtgtggtagaaacccctaagacagaaacacctcccattgccaccgca ccctccgttcccgcctctgttgtcgggggtatcaagtcccgctctagcagacagagcatc tcgtcgaccagcatccctgacactcctgctgacatggggtgggaagctgattgctatcct tccacctctgcttctcgtgcgaactccccccctgcctcctctcgtatcggctccgcccct gttcgcactatgaccaagagtcaggtcaagaaggaacgtaagcagaaggcgaaggaggcc gaggctaaaaaggtcgaaattgcagctgtgaatgaggagcctgttcaagcccctattatg gggcgaaagcgcaagaccaagaaggcccccacagccactgtgagcacccccgatacaccc gctgccattggtcccgagaaagcaagccctgtgaaaccagcgaatgcttctcctgttaaa gccgaacccaaggtggatgccaccacaaagaaaacgaaggccaaggagaccaagcctgtc agagagcctactcctccccctgtcgaagagcctcctgtccagaaggaaacccccgtagag ccgtggcgttcgaacaatacagttgggcagttggtcaaggattccgaggcccttggaaag gcaatcaaagatcttttcgtggagcgaaccaagcctcttcatgagttgctcgctgagatg cacaagtccggcgaacttgacctcaacaaaagtgccctcttcaaccctagcaacctcagc cagcgcaccgatatgaaatgcactgcagaggactacgattatctccagtgtcccaatgag ttgaccgaagaagatcggaaaactctccttcgcggagagcccgttcgaattggcgattat ttcctcaagactcgatgcctcatcacgccccgtggctgtgtcctgcgccatctcgagcca gaagaggaggagcgatacctagagctggagaagaatatggccggtatctccgaccctttc atgattggagatgacgcgagcaatcccagcggaggtctggaagcactcttcgcgaacccg gaaaagttcaacatctgctgggtcgacgacatgcccactcggctgggtgccacgtccccc tcgtcttctcttgaggcagctgaatctgtcatcccacctaacgtcctctcggccatggag gcagacagctcccgcaatcacgactgggccgttgccaactcggcagaattcctcaacacc acccctgctgccgtgcgttccttcgccgcagttaccgcgcagcacatgctgggcaatccg ggcatggtcggcaccaacccaaccctcgatgacgttgctggcttgaccaacgaggaactg aaggaactttctggtcgttctcagaaggacctcgagctcactcggaaggaaatggattcg ctggacaaaaagttcgcagctctccttcgacgcaacaagaagcttcagcagcaggcattg aactttgctactggctccgatgtgtaa

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