Penicillium rubens: N7525_002389
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Entry
N7525_002389 CDS
T01091
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
pcs
Penicillium rubens
Pathway
pcs03018
RNA degradation
pcs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
N7525_002389
09123 Folding, sorting and degradation
03018 RNA degradation
N7525_002389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcs03019
]
N7525_002389
03041 Spliceosome [BR:
pcs03041
]
N7525_002389
Messenger RNA biogenesis [BR:
pcs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
N7525_002389
mRNA degradation factors
5'-3' decay
Lsm complex
N7525_002389
Spliceosome [BR:
pcs03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
N7525_002389
Complex C
U2 snRNP components
N7525_002389
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Hfq
LRR_9
Motif
Other DBs
NCBI-GeneID:
8308759
NCBI-ProteinID:
XP_061071517
LinkDB
All DBs
Position
Unknown
AA seq
98 aa
AA seq
DB search
MLFFSFFKTLTNQTVTIELKNDIRIRGILKSVDQYLNIKLDDIEVLDLAKYPHLSSVKNM
FIRGSVVRYVMLPRSEVDVGLLEDATRREAANQAGKAR
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgcttttcttcagcttcttcaagactctgactaaccagacggtcaccattgagcttaag
aatgacatccgtattcgtggaatcctgaaatcggtcgaccaatacctcaacatcaagctc
gacgacatcgaagtattagacctggccaagtaccctcacctgtcttcggtgaagaacatg
ttcatccgaggcagtgtggtacggtacgtgatgttgcctcggtcggaggtcgacgttggg
ttgttggaggatgccacacggcgagaggctgccaaccaggctggcaaagctcggtaa
DBGET
integrated database retrieval system
