KEGG   Penicillium rubens: N7525_003882
Entry
N7525_003882      CDS       T01091                                 
Name
(RefSeq) uncharacterized protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
pcs  Penicillium rubens
Pathway
pcs03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pcs00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    N7525_003882
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcs03021]
    N7525_003882
   03019 Messenger RNA biogenesis [BR:pcs03019]
    N7525_003882
Transcription machinery [BR:pcs03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     N7525_003882
Messenger RNA biogenesis [BR:pcs03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     N7525_003882
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 Torus zf-CCCH_2 zf-CCCH_4 zf-CCCH_9
Other DBs
NCBI-GeneID: 8304449
NCBI-ProteinID: XP_002566408
UniProt: B6HS42
LinkDB
Position
Unknown
AA seq 256 aa
MATDTDTESAAAHIISAEPTRDPSYNEFTFTPFLRKSFGFGLASDVPVCKAYSEGHCPLG
PACPDRHPTPSRVTTSTTTASGMAPSTTHGSLVCKHFLKGLCKKGLKCEYLHEYNLRRMP
ECQSFSRSGYCTNGDDCLYQHVREEARLPPCEHYDRGYCELGPLCAKRHVRRRLCAFYLA
GFCPDGKACANAHPRWPENLPRPTMRTEKTEEELERERVLIREEQEREKEREREWRNERG
RGGGFGRGRFRGRGRG
NT seq 771 nt   +upstreamnt  +downstreamnt
atggctaccgataccgacactgaaagcgcagctgcgcacatcatatctgctgaaccgacg
cgcgatcccagctacaacgagtttactttcacaccatttctgcgcaagagcttcggcttc
ggactcgccagcgatgtacctgtctgcaaagcttatagtgaagggcactgcccattagga
ccggcttgcccagatcgtcatcccactccgtcccgtgtgaccacctcgactacgacagca
tctggaatggcgccatctacaacacatggatcgctggtttgcaaacatttcctcaaggga
ctatgcaagaaaggactgaaatgtgaatacctccacgaatataaccttcgacgaatgccg
gaatgccagtcattctcgcgatccggatactgcaccaatggtgatgattgcctttaccag
cacgtccgcgaagaggcacgcctgccgccttgcgagcactacgaccgtggatattgcgaa
ttgggaccactatgtgcaaagcgacacgtccgccggcgcctatgtgccttctatctggcc
ggattctgccctgatggaaaagcgtgtgccaatgcccaccctcgctggccggaaaaccta
ccacggcctacaatgcgcactgaaaagacggaggaagaacttgagcgcgaacgagtcctc
atccgcgaagaacaagaacgggaaaaagaacgggaacgagaatggcgaaacgaacgtggt
cggggtggtggatttgggcgtggccgcttccgcggacgtggaaggggttag

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