KEGG   Penicillium rubens: N7525_005085
Entry
N7525_005085      CDS       T01091                                 
Name
(RefSeq) Small nuclear ribonucleoprotein SmD3
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
pcs  Penicillium rubens
Pathway
pcs03040  Spliceosome
pcs04139  Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:pcs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    N7525_005085
 09140 Cellular Processes
  09141 Transport and catabolism
   04139 Mitophagy - yeast
    N7525_005085
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcs03019]
    N7525_005085
   03041 Spliceosome [BR:pcs03041]
    N7525_005085
   03032 DNA replication proteins [BR:pcs03032]
    N7525_005085
Messenger RNA biogenesis [BR:pcs03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     N7525_005085
Spliceosome [BR:pcs03041]
 Complex A
  U1 snRNP components
   Sm proteins
    N7525_005085
  U2 snRNP components
    N7525_005085
 Complex B
  U1 snRNP components
    N7525_005085
  U4/U6.U5 tri-snRNP components
    N7525_005085
 Complex C
  U2 snRNP components
    N7525_005085
DNA replication proteins [BR:pcs03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     N7525_005085
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 8310763
NCBI-ProteinID: XP_002565203
UniProt: B6HRX7
LinkDB
Position
Unknown
AA seq 117 aa
MGKLTSTIGIPIKLLNEAQGHVVTIEITSGVVYRGKLLEAEDNMNVQLKDITVTARDGRV
SHLDQVYIRGSHVRFFIVPDMLRNAPMFRTRGQRGRGVGLARGKATVQRARGQRGRG
NT seq 354 nt   +upstreamnt  +downstreamnt
atgggcaagctcacctccacgatcggcatcccgatcaagctcctcaacgaagcgcagggc
catgtcgtgacaattgagatcacatcaggagtcgtctaccgggggaagcttttggaagcc
gaggacaacatgaacgttcagctcaaggacatcaccgtcactgcccgcgatggccgtgtc
tcccatctcgaccaggtttacattcgcggcagccacgtgcgattcttcatcgtgcctgac
atgctccggaatgctcccatgttccgtacacgaggccagcgcgggcgcggtgtcggtttg
gcgcgtggtaaggctacagtgcaacgtgcgcgtggccagcgcggccggggttaa

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