KEGG   Penicillium rubens: N7525_005688
Entry
N7525_005688      CDS       T01091                                 
Name
(RefSeq) WD repeat-containing protein
  KO
K12880  THO complex subunit 3
Organism
pcs  Penicillium rubens
Pathway
pcs03013  Nucleocytoplasmic transport
pcs03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    N7525_005688
  09122 Translation
   03013 Nucleocytoplasmic transport
    N7525_005688
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcs03019]
    N7525_005688
   03041 Spliceosome [BR:pcs03041]
    N7525_005688
Messenger RNA biogenesis [BR:pcs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     N7525_005688
Spliceosome [BR:pcs03041]
 Complex C
  Other components
   EJC/TREX
    N7525_005688
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    N7525_005688
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd ANAPC4_WD40 WD40_Gbeta Beta-prop_WDR75_1st Beta-prop_TEP1_2nd Beta-prop_Aladin WDR55 Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Cytochrom_D1 WDR90_beta-prop_4th Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_EML Tricorn_2nd DSE1_N Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_WDR36-Utp21_1st Beta-prop_ACSF4 eIF2A Beta-prop_NOL10_N WD40_RFWD3 CFAP251_N Beta-prop_Vps41 Beta-prop_WDR41 PAC11 ASA1 Beta-prop_SPT8 PALB2_WD40
Other DBs
NCBI-GeneID: 8313680
NCBI-ProteinID: XP_061070504
LinkDB
Position
Unknown
AA seq 440 aa
MAAPDNDPPAVSGFLEAVSEYSPSVHHSSNSIQPELPSPITSSATVSTAGSNAGSPISRQ
FLEEEDEEMAPAPRRELLHKDHFAFVFGSVKTQNYLDPVSKGPGSHTIRTLAWNPTGQLI
ATGSADRTLRIWNPDRPHVRYSTELRGHTAGIEKALFNPVRDAELASCSADGTVRFWDVR
SKTCVSRLDVGGEAFTLSWSADGSTMIVGKKDDTLIPVSVQFPSSPTTHPDGVNALNLPS
STPGATTYTALDPHPQTVQTNATTFSWCMPTPERPEQHVFVTTGEGKVKIMSYPSFDIMH
TLNAHTSACLSIALAPTGRYLAVGGSDALISLWDTTDWICRRTLSSENGGAIRGVSWSFD
GRFIVGACDEIGCGGNGLEIFHAESGDSIYTIPTAGVNAGVSAVAWHPSRYWLAYSTTTD
GPGSSSAGGLKIVGAAGGGL
NT seq 1323 nt   +upstreamnt  +downstreamnt
atggcggcacccgataacgatcctccggcagtatcgggcttcctagaggcggtatctgag
tactctccgtctgtccatcattcttcgaatagcatccagcctgagcttccaagtcctatc
acttcttctgctaccgtttctaccgctggttcgaatgcaggtagtccaatctcgcgccaa
ttcctagaggaggaagacgaagagatggcgcccgctccgcgtcgcgagctcctacacaag
gatcactttgcattcgtgtttgggagcgtgaaaacccaaaactacttagaccctgtctcc
aagggaccaggctctcacacgatccgcactcttgcttggaaccccacgggccagctgatt
gcgactggctcagcagatcgcactctgcgaatctggaacccggaccgtcctcatgtacgg
tactctactgaattgcgcggccacaccgctggtatcgagaaggctcttttcaacccagtc
cgcgatgcggagctagccagttgctcggccgatggtacagtgcgcttctgggatgtgcgc
tccaagacatgtgtgagccgcctcgatgtcggtggcgaagcatttacactctcctggtct
gctgacggcagcacaatgatcgtcggcaagaaggacgacaccttgattcccgtctccgtt
caattcccctcctctcctaccacccaccccgatggcgtgaacgccctcaacctcccctcc
tctacacccggcgcaaccacatacacagctctcgatcctcaccctcagaccgtccaaaca
aatgcgacaaccttctcctggtgcatgccgacacccgaacgtccggagcagcatgtattc
gtgacaaccggtgaaggcaaggtcaaaatcatgtcctacccttccttcgatattatgcac
actctcaacgcccacacctcggcctgtctttcaattgcgctcgccccgacaggccgatac
ctggcggttggcggaagcgacgctctcatctccctctgggacacaaccgactggatctgt
cgccgcactttgtccagcgaaaatggtggcgctattcgtggcgtgagctggagcttcgat
ggccgcttcattgttggcgcatgcgatgagattggatgtggtggtaatggactggagatc
ttccatgctgagtctggcgatagcatttacacaattcctactgctggtgtcaatgctggt
gtctctgctgttgcgtggcatccatctcgctactggctcgcttactcgactaccactgat
ggacctggtagctccagcgctggaggcttgaagattgtcggtgctgctggtggtggcctg
taa

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