KEGG   Penicillium rubens: N7525_007117
Entry
N7525_007117      CDS       T01091                                 
Name
(RefSeq) uncharacterized protein
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
pcs  Penicillium rubens
Pathway
pcs03022  Basal transcription factors
pcs03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pcs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    N7525_007117
  09124 Replication and repair
   03420 Nucleotide excision repair
    N7525_007117
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcs03021]
    N7525_007117
   03400 DNA repair and recombination proteins [BR:pcs03400]
    N7525_007117
Transcription machinery [BR:pcs03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     N7525_007117
DNA repair and recombination proteins [BR:pcs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     N7525_007117
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-GeneID: 8313631
NCBI-ProteinID: XP_002567690
UniProt: B6HJB0
LinkDB
Position
Unknown
AA seq 374 aa
MNSVDASEHYELGAPDLSPSLLTIVIDTNPHAWAVLEDSLPLSKAIANILVFINAHLACN
YANEVAVVASHSQKAAWLYPSHSEPQYRPADHDGDVTMNGTSDTTTPKTNKYRPFRIVEE
QVTRNLKELMDSTTGDDLRGNMSTMLAGALTLALSHINRRTLAWAEEHGGANTEDAAADG
NGGGTTSTNRYSASNEDERLQSRILVVSVSGSTDAAHQYIPVMNSIFACQRLSIPIDVCK
LSGDAVFLQQASDATKGVYMALAEPRGLLQYLMMAFLPDQRSRRHLVLPTRVDVDFRAAC
FCHRRVVDVGFVCSICLSIFCEPPPGGDCMTCGSHLDIRDNAKPALLPRKKKKKKRVNGA
SGTGTPMSTPTPGP
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgaattccgtggatgcttcggagcattatgagttaggagctcccgacctctccccatcc
ctgctcacaatagtcatcgacacaaacccacacgcctgggccgtcctcgaagactccctc
ccactctccaaagcaatcgccaacatcctagtattcatcaacgcccacctagcctgcaac
tatgccaacgaagtcgccgtagtcgcatcgcacagccaaaaagcagcatggctctaccct
tcccacagcgaaccccaataccgccccgccgatcatgacggcgatgtcacaatgaacggc
acaagcgacaccacaaccccgaaaacaaacaaataccgccccttccgcatcgtcgaagaa
caagtcacccgcaacctcaaagagctaatggactcgacgacgggcgacgatctgcgcggc
aacatgtccacgatgctagcgggcgcgctaaccctcgccctgagccacatcaaccgacgc
acgctcgcctgggcagaggagcacggcggcgccaacaccgaagacgcggcggccgatggc
aacgggggcgggacgacatccacgaaccgatactcggcctcgaacgaagacgaacggctg
cagagccgcatcttggtcgtttccgtgagcgggtctaccgacgctgcgcaccagtatatc
cctgtcatgaacagcatcttcgcctgccagcgcttgagcatccccatcgatgtgtgtaag
ctcagtggcgatgcggtctttctgcagcaggcgtcggatgctaccaagggtgtttatatg
gctcttgctgagccccggggcctcctgcagtatcttatgatggcgtttttgccggatcag
cgatcgcgtcgccatttggttcttcccacgcgggtggatgtcgattttcgggctgcttgc
ttttgtcatcgccgggtggttgatgttggcttcgtgtgctccatttgtctcagtatcttc
tgcgaaccgccccctggtggtgactgcatgacttgtggttcgcatctggatatcagggat
aatgccaagcctgctctgttgccgaggaagaaaaagaagaagaagcgtgttaacggggca
tccggaactgggacgcccatgtcgacgcctacgcctggtccttga

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