Penicillium rubens: N7525_007836
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Entry
N7525_007836 CDS
T01091
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pcs
Penicillium rubens
Pathway
pcs03020
RNA polymerase
pcs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
N7525_007836
09124 Replication and repair
03420 Nucleotide excision repair
N7525_007836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcs03021
]
N7525_007836
03400 DNA repair and recombination proteins [BR:
pcs03400
]
N7525_007836
Enzymes [BR:
pcs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
N7525_007836
Transcription machinery [BR:
pcs03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
N7525_007836
DNA repair and recombination proteins [BR:
pcs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
N7525_007836
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
MRNIP
Motif
Other DBs
NCBI-GeneID:
8306454
NCBI-ProteinID:
XP_002568295
UniProt:
B6HM08
LinkDB
All DBs
Position
Unknown
AA seq
1255 aa
AA seq
DB search
MADYDETYEEDFYDEADEGITSEDCWTVISSFFDSKGLVSQQLDSFDEFISSTMQELVEE
QGQVVLDQTLPPSEDEIEPIVVRRYELKFGTVMLSRPSVTEGDGATTIMLPQEARLRNLT
YASPLYLGVTKKIMEGREKIGKPTDDDDNEGESDPKTQGTYLEWETKQLPQEQMKEETVF
IGKMPIMLKSKYCILKDLNESSLYAWNECPYDSGGYFVINGSEKVLIAQERSAGNIVQVF
KKAPPSPTPYIAEIRSAVEKGSRMLSSLTLKLFAKGDSAKGGFGPTIRSTLPYVKADIPI
VVVFRALGVVSDEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFIAKRGSSQS
NLNHDRRVRYARDIMQKELLPHISQNEGSETRKAFFLGYMVHRLLQCALGRRDVDDRDHF
GKKRLDLAGPLLASLFRTLFTRVTKDLQRYVQRCVETNREIYLNIGIKASTLTGGLKYAL
ATGNWGEQKKAASAKAGVSQVLSRYTFASSLSHLRRTNTPIGRDGKIAKPRQLHNTHWGL
VCPAETPEGQACGLVKNLALMCYITVGTPAEPIVDFMIQRNMEVLEEFEPQVTPNATKVF
VNGVWVGIHRDPSHLVTTMQNLRRRNMISHEVSLIRDIREREFKIFTDTGRVCRPLFVID
NDPKSENSGGLVLNKEHIRKLEADKDLPTDMAPEERREQYFGWDGLVRSGAVEYVDAEEE
ETIMIVMTPEDLEISRQLQAGYALPDDETSDPNKRVRSILSQRAHTWTHCEIHPSMILGV
CASIIPFPDHNQSPRNTYQSAMGKQAMGVFLTNFSQRMETMANILYYPQKPLATTRSMEF
LRFRELPAGQNAIVAIATYSGYNQEDSVIMNQSSIDRGLFRSLFYRTYADTEKMVGLQVV
ERFEKPMRLDTLGMRKGTYDKLDEDGIVAPGVRVSGEDIIIGKTAPLAADAEELGQRTKA
HTKIDVSTPLRSTENGIVDQVLISTGNDDLKFVKVRMRTTKVPQIGDKFASRHGQKGTIG
ITYRQEDMPFTREGVVPDLIINPHAIPSRMTIAHLIECQLSKVSALRGFEGDATPFTDVT
VDSVSRLLREHGYQSRGFEVMFNGHTGRKLVAQVFLGPTYYQRLRHMVDDKIHARARGPT
QILTRQPVEGRARDGGLRFGEMERDCMIAHGASSFLKERLFDVSDPFRVHICDDCGLMTP
VAKLKKGLFECRLCNNKHRISQVHIPYAAKLLFQELASMNIAARMFTDRSGVSVR
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atggcagactacgacgagacatacgaggaggacttttacgatgaggcggacgagggcatc
acctccgaggattgctggacagtgatttcgtccttttttgactccaagggtctggtctcc
cagcagttggactcattcgatgaattcatttcctcaacaatgcaagagctcgtggaggag
caaggccaggtggttctcgaccagactctccccccctccgaagacgaaatcgagccgatc
gttgtgcgccgttatgagcttaaatttggcactgtcatgctttcgcgcccatccgttaca
gaaggcgatggcgcgaccacgataatgttgccccaggaagctcgtctacgaaacctcacc
tacgcgtccccactttacctcggcgtcacaaagaagattatggaaggtcgtgaaaagatc
ggcaagcccaccgacgatgatgataatgagggcgagagcgacccgaagacccaaggcaca
tacctcgaatgggaaacgaagcagctgccccaggagcagatgaaggaggaaacagtcttt
attggaaagatgcctattatgctgaaatctaaatactgtatcctcaaggatctgaacgaa
tcgtcactttatgcttggaacgagtgcccttacgactctggcggttacttcgtcattaac
ggcagtgagaaggttttgatcgcacaggagcgcagtgcgggcaacatcgtccaagtcttc
aagaaggcacctcccagcccgacaccatacattgctgaaattcgaagtgcggtcgagaag
ggctcgcgcatgctttcgtcgcttactttgaagcttttcgccaagggtgacagcgccaaa
ggaggatttggcccgactattcgctcgacgcttccatacgtcaaggccgatattccaatc
gtcgtcgttttccgtgcgctgggcgtcgtttccgatgaagatatcctcaaccacatttgc
tatgaccgcaacgatacccccatgctggagatgttgaaaccgtgtatcgaggagggcttt
gtcatccaggaccgtgaagttgccctggatttcattgccaagcgtggatcgtcacagtcg
aacctgaaccacgatcgtcgtgtgcgctacgcccgggatattatgcagaaggaattgctg
cctcatatttcgcagaatgagggaagtgaaacccgcaaggctttcttccttggatacatg
gtacaccgacttcttcagtgtgctctgggtcgtcgtgatgtcgatgaccgtgaccacttc
ggaaagaagcgactcgatttggctggtccgcttttggcaagtcttttccgaactcttttc
acccgagtcacgaaggatctccaacgttacgtccagcgatgcgttgagaccaatcgagaa
atttatctcaacattggtatcaaggctagcacattgaccggtggattgaagtatgctctt
gctactggtaactggggcgagcagaagaaggcggcttccgccaaggctggtgtgtcccag
gtgctgagtcgttacacatttgcctcctccttgtctcatctgcgccggacaaacaccccc
attggcagagatggaaagatcgccaaacctcgccagctccacaatactcactggggtttg
gtctgcccggccgagacacctgaaggtcaggcttgtggtctggtcaagaaccttgcattg
atgtgctacatcactgttggtacacctgctgaacctatcgtggatttcatgattcagcgg
aacatggaagttctcgaggagtttgaaccccaagtgacgcctaatgcaacaaaggtgttt
gtcaatggtgtctgggtgggtattcaccgggatccttcgcatcttgttactacgatgcag
aatctgcgtcgacgaaacatgatctcccatgaagtcagtttgattcgtgacatccgtgaa
cgggagttcaagatcttcaccgatactggacgtgtctgccggccactcttcgttattgat
aatgatcccaagagtgaaaactcgggcggattggtccttaacaaggaacacattcggaag
ctcgaggccgacaaagacttgccaacagacatggcaccagaggaacgccgcgaacagtac
ttcggatgggatggcctggtgcgttcaggagcagttgagtatgtcgacgctgaagaagag
gaaactatcatgattgtcatgacccctgaggatcttgagatctctcgacagctccaggct
ggctacgctctgccagatgacgaaaccagcgaccccaacaagcgtgttcggtcgattctc
agccagcgtgctcacacctggacgcactgcgaaatccaccctagtatgatcctgggtgtt
tgcgctagtattattccgttcccggatcataaccagtcgccgcgtaacacctatcagtcg
gccatgggcaaacaagccatgggtgtgttcttgacgaacttttcacagcgtatggagacc
atggccaatattctctactacccacaaaagcctttggccaccactcggtcgatggagttc
ctgcgtttccgagagttgcccgccggtcagaatgctattgtcgctattgcaacttactcc
ggttacaaccaggaagattccgttatcatgaaccagagcagtatcgatcgtggtctattc
cgcagtctcttctaccgtacctacgcggatactgagaagatggtgggactgcaagttgtt
gagagattcgagaaacccatgcggcttgacaccctcggcatgcgcaagggtacttatgat
aagttggacgaggacggcatcgtcgctcccggtgtgcgtgtctccggagaagatattatc
atcggcaagaccgctccgttggctgctgatgcagaggagctcggtcagcgcacgaaggca
cacacaaagattgatgtgtcaacgcccctgcgtagtaccgagaacggtatcgttgaccag
gtgttgatctccactggtaacgacgacttgaagttcgtcaaggttcgcatgcgtactacc
aaggtcccccagattggtgacaagttcgcttctcgtcacggtcagaagggtaccattggt
atcacctaccgacaggaggacatgcctttcactcgggaaggtgtcgttcccgatctgatt
attaacccgcacgccattccgtcccgtatgaccattgctcacttgatcgagtgtcagctc
agcaaggtttcggctcttcgtggattcgagggtgatgctactcctttcactgatgtcact
gtcgactcagtctcgcgtctgctgcgcgagcacggctaccagtcgcgtggattcgaggtc
atgttcaacggccacactggtcgcaagctggtggcgcaggtcttcctgggtcccacctac
taccagcgtctgcgccacatggtggatgacaagatccacgctcgtgctcgtggtcctact
cagatccttacccgccagcctgtggagggtcgtgcccgtgacggtggtctccgtttcgga
gagatggagcgcgattgtatgatcgcccacggcgccagttctttcctgaaggaacgtctc
tttgacgtttccgatccgttccgtgttcatatttgcgacgattgcggcctgatgacacca
gttgcgaaactgaagaagggtcttttcgagtgccgcctttgcaacaacaagcaccgtatc
tcgcaagtgcacatcccctatgctgccaagctgttgttccaagagctggcctccatgaac
attgccgctcggatgttcaccgatcgctctggggtttcggtgcgttga
DBGET
integrated database retrieval system
