KEGG   Penicillium rubens: N7525_008058
Entry
N7525_008058      CDS       T01091                                 
Name
(RefSeq) uncharacterized protein
  KO
K13025  ATP-dependent RNA helicase [EC:5.6.2.7]
Organism
pcs  Penicillium rubens
Pathway
pcs03013  Nucleocytoplasmic transport
pcs03015  mRNA surveillance pathway
pcs03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    N7525_008058
  09122 Translation
   03013 Nucleocytoplasmic transport
    N7525_008058
   03015 mRNA surveillance pathway
    N7525_008058
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcs03019]
    N7525_008058
   03041 Spliceosome [BR:pcs03041]
    N7525_008058
   03009 Ribosome biogenesis [BR:pcs03009]
    N7525_008058
   03012 Translation factors [BR:pcs03012]
    N7525_008058
Enzymes [BR:pcs01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     N7525_008058
Messenger RNA biogenesis [BR:pcs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     N7525_008058
   mRNA cycle factors
    Stress granule specific factors
     N7525_008058
Spliceosome [BR:pcs03041]
 Complex C
  Other components
   EJC/TREX
    N7525_008058
Ribosome biogenesis [BR:pcs03009]
 Eukaryotic type
  90S particles
   Helicases
    N7525_008058
Translation factors [BR:pcs03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    N7525_008058
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Cas3-like_C_2 AAA_19 AAA_30 AAA_22 COG4_N TniB Flavi_DEAD
Other DBs
NCBI-GeneID: 8315519
NCBI-ProteinID: XP_061068716
LinkDB
Position
Unknown
AA seq 399 aa
MADGIDRRAEERMEFNTSKEVTVAPTFEDMHLKESLLRGVYAYGYESPSAVQSRAIVQIC
KGRDTIAQAQSGTGKTATFAISTLQIIDTVVRETQALVLSPTRELATQIQSVVMALGDYM
NVQCHACIGGTNVGEDIRKLDYGQHVVSGTPGRVADMIRRRNLRTRHIKMLVLDEADELL
NRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQ
YFIAVEKEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLADKMREANFTVSSMHGEMPQ
KERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGR
KGVAINFVTSDDVRILRDIELYYSTQIDEMPMNVADLLS
NT seq 1200 nt   +upstreamnt  +downstreamnt
atggcggacggaatcgacagacgcgcagaggagcgcatggagttcaacacctccaaggag
gtgacggtcgcgccgaccttcgaggacatgcacctgaaggaaagtctgcttcgcggagtc
tacgcttacggatacgaatcgccttcggctgtgcaatctcgtgcgattgtacaaatctgc
aaaggtcgcgacactattgcccaggcccagtccggtactggtaaaactgccacattcgcg
atcagtaccttgcagattattgatactgttgtgcgcgagacccaagctctggttctctcc
ccgacccgcgaactcgcaactcaaattcaatccgtcgttatggccctcggtgattacatg
aatgtccagtgccacgcttgtattggagggaccaacgttggtgaagatatccgcaaactc
gactacggccaacacgttgtctcgggaactcctggtcgtgtggccgatatgatccggcgc
cgaaacctgcgcacacgtcatatcaagatgctggttctcgatgaagccgacgagctcctt
aaccgcggtttccgtgagcagatttacgacgtttaccgctacctgccccccgcgacgcag
gtcgtcgtggtctctgccaccctcccatacgatgtcttggacatgaccacaaagttcatg
actgaccccgtccgtgtcctagtcaagcgtgacgagttgacactggagggtatcaagcaa
tacttcattgctgttgagaaggaggaatggaagttcgacacactttgcgatctgtacgat
accttgactatcacccaggccgttatcttctgcaacacccgccgaaaggtcgactggctt
gccgacaagatgcgtgaagccaactttactgtctccagtatgcacggcgagatgcctcag
aaggagcgtgatagtattatgcaagacttccgtcagggcaattctcgtgtcctcatttct
actgatgtctgggcccgtggtatcgatgttcagcaagtctctcttgttatcaactacgat
ctgcctacaaaccgtgagaactacattcaccgtattggtcgatctggacgattcggccgc
aagggtgtggccatcaactttgtcaccagcgatgatgtccgcatccttcgcgacattgag
ttgtactactcgacccaaattgatgaaatgccaatgaatgttgcggacttgctttcataa

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