KEGG   Penicillium rubens: N7525_009239
Entry
N7525_009239      CDS       T01091                                 
Name
(RefSeq) uncharacterized protein
  KO
K03679  exosome complex component RRP4
Organism
pcs  Penicillium rubens
Pathway
pcs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pcs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    N7525_009239
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcs03019]
    N7525_009239
Messenger RNA biogenesis [BR:pcs03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     N7525_009239
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     N7525_009239
SSDB
Motif
Pfam: RRP4_S1 ECR1_N RRP40_S1 KH_6 ECR1_N_2
Other DBs
NCBI-GeneID: 8313401
NCBI-ProteinID: XP_002563334
UniProt: B6HEP3
LinkDB
Position
Unknown
AA seq 391 aa
MAITILPPVVEDARPYEPDSDDSMSMDSEEDVEMTGISRPHKRPRLGNSNIGAGIVTPGE
VVTDDPQWMRGHGTYTNPLSTSIIATVAGTVQKTNKLLSVHPLRARYTPEIGDLVVGRIV
EVQSRRWKVDVAAPLLAQLPLSAINLPGGILRRRTSADELQIRTFFSEGDLVVAEVQSVH
QDGSASLHTRSLKYGKLRNGVFLAVTGTGGSAASSSSVKGGVGAGNSASGSALAAPGGSG
TGGVVRSRRQVWTVPTANGGGEVNIILGVNGYIFISKNPEGADAASSATENVSITRMEEM
VSSSIYSSQNDDIPPQTRREIARLTQCIRVLVQNGVRVDEETVMGAYNASLQVDLEIGDD
EDEEDEWRQEGREYLEGAKAQDILELVKQQL
NT seq 1176 nt   +upstreamnt  +downstreamnt
atggcaattactatccttcctccagtggtagaggatgcccgtccctatgaacccgactcc
gatgactccatgtccatggactccgaggaggacgtcgagatgacaggtatctctcggcct
cacaaacgaccccgtttaggaaactcgaatattggcgcagggattgtcacgccaggagaa
gtggtcacagatgatccgcaatggatgagaggtcacggcacctatacgaacccgctctcg
acatctatcattgcgaccgttgccggcacagttcaaaagacaaataagctgctctccgtt
caccctctgcgggcccgctatacccccgagattggtgatctcgtcgttggccgcattgtc
gaagtgcaatcacgacggtggaaggtcgacgtcgccgcgccgctacttgcccagcttcca
ctttccgcaatcaacctgcccggcggtattctgcgtcgacgaacaagcgccgacgagctc
cagatccgaacatttttcagcgaaggcgaccttgtagtcgcggaagtgcagagcgtgcac
caggacgggtcggcatcactacacacacggtccttgaagtacgggaagctgcgcaacggc
gtgttccttgccgttacaggaaccggaggcagtgcagcgtctagctccagtgttaagggc
ggtgttggggctgggaattcggcttccggcagcgctttggctgctcctggaggttctggt
actggcggtgtggtgcggtctcgtcgacaggtgtggacggtccctacggccaatggtggt
ggtgaggtgaatattatccttggggtgaatgggtacatttttatctccaagaaccctgaa
ggggcagatgcggcatcctcagctacggagaatgtctccattacgcgcatggaagagatg
gtgtcgagttcgatctactctagccagaacgacgatatcccgccacagactcgccgtgag
attgcacggttgacacagtgcattcgagttctggtacagaacggagtgcgtgtggatgaa
gagacggtcatgggtgcctacaatgctagtctgcaggtggatctggagattggggacgat
gaagacgaggaagatgaatggcgacaggaaggtcgcgagtatctggagggcgccaaggcc
caagatatcctcgagttggtgaagcagcagctataa

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