KEGG   Penicillium rubens: N7525_009325
Entry
N7525_009325      CDS       T01091                                 
Name
(RefSeq) uncharacterized protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pcs  Penicillium rubens
Pathway
pcs03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    N7525_009325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pcs03041]
    N7525_009325
Spliceosome [BR:pcs03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    N7525_009325
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 PRP4 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_HPS5 Beta-prop_TEP1_C NBCH_WD40 Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_DCAF4 WD40_like WDR54 WD40_RFWD3 Nbas_N
Other DBs
NCBI-GeneID: 8314463
NCBI-ProteinID: XP_002563424
UniProt: B6HF87
LinkDB
Position
Unknown
AA seq 521 aa
MMHPARQAYVEETEDTDMGGISYADLPMDQDYDMPTTAGGIPSERVSAILSQFERKRRAA
AMVVPTDDTRVRARLRELGEPITLFGEGPSERRDRLRELLTDMAEQQGGVEIEMEEAEEE
GEQQEEFFTEGGNELLEARKDIARYSLPRAKARVARLKDESTIPLRTHVKHRKAVKEKLQ
GFDLYGSQIAGDRPVSICRFAPDGQTIAAGNWSGGIKLLGVPNLEEKASFNAHTDRVGGL
SWFPGATLPTSNVSPSTVNLISGGGEGNLNLWALDQEKPLATLSGHSGRVCRTEFHPSGR
YAASASFDSSWRLWDVETATELLLQEGHSREVYTVAFNSDGSLVASGGFDSIGRIWDLRT
GRNVMILDGHIREIYGMDWGVDGHRVLSGSGDGWVKCWDLRQMKETGGIGAHKSVVSDLR
WYKGAEAASFLPSTDGGMDIDGAPPAAVDKAAEAPSPKKSGTFFVSSGFDKSVNIFSADD
WSLVKSLSGHSGNVLSTDVSDDAKWIASCGHDRTVKLWGIE
NT seq 1566 nt   +upstreamnt  +downstreamnt
atgatgcacccagcgcgacaggcttatgtcgaggagacggaggacacagacatggggggc
atcagctatgctgatcttccgatggaccaagactatgatatgcccactaccgcagggggg
atcccaagcgagcgggtctccgccattctatcgcaattcgaacggaaacgtagagcagca
gctatggtggttccaacagatgacacacgagtgcgcgcacgactacgagagctcggagag
cccattaccctattcggcgaaggaccatcagagcgacgcgatcgtctacgtgaactgttg
accgacatggcggagcaacagggcggagtcgagatagaaatggaagaagccgaggaggaa
ggggaacagcaagaagaattcttcacagagggtgggaacgagttactcgaggcgcggaaa
gatattgcgcgctattctttgccgcgcgcaaaggctcgagtggcccggctcaaagacgaa
tccacaattccacttcgaacgcatgtcaagcatcgcaaagccgtcaaggagaagctacaa
gggtttgatctttacggatctcagattgctggcgatcgtccggttagcatttgtcgattc
gcgccggatgggcaaacaatcgctgctgggaactggagcggtgggatcaaattgctcggc
gtgcccaatctggaagaaaaagcgagtttcaatgcgcatacggatcgagtgggtggtttg
tcgtggttccccggcgccactctacccacctcgaatgtctcaccctcaactgttaatttg
atctccggaggcggcgaaggaaaccttaacctctgggcccttgatcaggaaaagccgctg
gctacgttatctggtcactcggggcgtgtgtgccgtaccgagttccacccttcaggtcgt
tatgcagcatcggcatccttcgacagctcatggcggctgtgggatgttgaaacagccact
gagctgctgctccaagaaggccattcgcgagaggtatatacagtggcgttcaacagtgat
ggctctcttgtggctagtggtggattcgacagtatcggacgtatctgggatctgcggaca
gggcgcaacgtgatgatcctcgacggccacattcgcgaaatctacggtatggactggggc
gttgatggacaccgggtgctgtctggttccggcgatggatgggtcaaatgctgggacttg
cgacagatgaaagagacgggcgggattggtgcgcataagagcgtggtatcggatctccgc
tggtacaagggtgcagaggctgcgtccttcttgccttctacagatggcgggatggacatt
gatggcgctccgccagctgcagtggataaagcagcggaggcgccctcgcccaagaagtcg
ggcacgttctttgttagcagtgggtttgataaaagtgtcaacattttcagcgcggatgac
tggtccctcgtgaagtcgctgagtggccactcgggtaacgttctcagcacggatgtcagt
gacgatgcaaagtggattgctagctgcggtcacgaccgtacggttaagctttgggggatt
gaatga

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