Penicillium rubens: N7525_010545
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Entry
N7525_010545 CDS
T01091
Name
(RefSeq) uncharacterized protein
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
pcs
Penicillium rubens
Pathway
pcs03008
Ribosome biogenesis in eukaryotes
pcs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
N7525_010545
09123 Folding, sorting and degradation
03018 RNA degradation
N7525_010545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcs03021
]
N7525_010545
03019 Messenger RNA biogenesis [BR:
pcs03019
]
N7525_010545
03009 Ribosome biogenesis [BR:
pcs03009
]
N7525_010545
03016 Transfer RNA biogenesis [BR:
pcs03016
]
N7525_010545
Transcription machinery [BR:
pcs03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
N7525_010545
Messenger RNA biogenesis [BR:
pcs03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
N7525_010545
Ribosome biogenesis [BR:
pcs03009
]
Eukaryotic type
Pre-60S particles
RNases
N7525_010545
Transfer RNA biogenesis [BR:
pcs03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
N7525_010545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
8314938
NCBI-ProteinID:
XP_061067642
LinkDB
All DBs
Position
Unknown
AA seq
1036 aa
AA seq
DB search
MGVPALFRWLSNKYPKIVSPVIEEQPQVVDGEEIPIDITRPNPNGEEQDNLYLDMNGIVH
PCTHPEGKPPPADEQEMMMEIYKYTDRVVNMVRPRKLLMIAIDGVAPRAKMNQQRARRFR
SAQEAKENDQKKEELHKMLAQQHATKTGEQLIREEVVQKTWDSNVITPGTPFMDILAASL
RYWIAYKLNTDPGWENLKIIISDATVPGEGEHKIMNFVRSQRASPYHDPNTRHVIYGLDA
DLIMLGLGTHEPYFRVLREDVFAQDSRPRGCRLCGQNGHKAEECLGRPKEKSGEFDEKQH
AAPLKPFIWLHVAVLREYLAVELRVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLD
IRENGIDTLIAIWRDSLPAMGSYLTKDGSVELKNAQIILQGLAKQEDAIFARRRQADERK
QANEKRRKEQDAARNEERAQKRRRSSPQYDLTAGDRSRGGGGEPVPPMELITPGRGHLNK
ETRELTHSMVINRGAVYRANMENKSAAAVLKSKLMKGKQDGAGDSETPATDGEDVSSETP
EQTSPGVLGKRKADEAEQDVTEIGTPGRDSPLPATVAAEKPKQDEPQEDTVKLWEPGYAD
RYYEQKFGVDPKDLEFRHQVAREYAIGLCWVLRYYFQGCPSWTWYYPRHYAPFAADFVDI
ADMDVKFEKGTIFKPFEQLMGVLPASSNHALPKVFHPLMESPDSEIIDFYPEDFPLDLNG
KKFAWQGVILLPFIDETRLLNAMAKVYPLLTEDEKSRNTHGQEVLLLSDRNPLYQDLVAN
FYSKKPGPAQYPLKEDVSGGLAGIVERSETYIPHSSLVSPLEAHGMPGVDDDRSLTVMYT
IPKSSHVHKSMLLRGVKLPTPMLDSNDIRATQTRSQNSGRSFGGAPFQGRGRGGRMNYSS
DRPNPFAAHLDPKFNSGPQPGLGGPGGAPMVPPGWVPPGQGYGGYARGPPPPPRGGMSYQ
YPPQHPPQHGYQQPGDYYGQQNQYNQGGQYNSGHQPGYGQQDYRGGRGGNRGGRGRGGQQ
RDYYSHNQGGGGYNRY
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtccccgcgctgttccgatggctctccaacaaatatccgaagattgtttctccg
gttattgaggagcagccccaagtggtcgatggggaagaaatcccaatcgatatcactcgt
ccgaacccgaatggcgaggagcaggataacctttacctggacatgaatggtattgttcat
ccatgtacccatcccgaggggaagcctcccccagcggatgagcaggaaatgatgatggaa
atctacaagtacactgatcgagtggtcaacatggtgcgccccagaaagcttctcatgatc
gctatcgatggtgtcgccccaagagcgaagatgaaccagcagcgcgcgcgtcgattccgc
tcggcgcaagaggccaaggagaatgaccagaagaaggaggagctccacaagatgcttgct
cagcagcatgctacgaagaccggcgaacagttgattcgggaggaggttgttcagaagacg
tgggacagcaacgttatcacgccaggaacgcccttcatggatatccttgccgcctcgtta
cggtattggattgcctacaagctcaacactgacccgggttgggaaaatctgaaaatcatc
atttcggatgccacggtcccaggagaaggagagcacaagatcatgaattttgtgcgatcg
cagcgagcctcgccttatcacgacccaaacactcgtcatgtcatctatggtctagacgct
gatctgattatgctgggtcttggtacccacgaaccttacttccgtgtactgcgtgaagac
gtgtttgctcaagactctaggcctcgcgggtgcagactttgtggacagaacggccacaag
gctgaggagtgtctaggccgcccaaaggagaagagtggggaattcgacgaaaagcagcac
gctgcccccctgaagccattcatttggctccatgtcgctgtgctaagagaatatcttgct
gtggagcttcgtgttcctcagcaaccgttcccattcgaccttgaacgtgctctggatgac
tgggtcttcatgtgtttcttcgttggaaacgatttccttcctcatctgccttctttggat
attcgtgaaaacggaattgataccctgatcgcgatctggcgtgacagtctccctgccatg
ggaagttaccttaccaaagatggaagtgtcgagttgaaaaacgctcaaattatcttgcaa
ggactggcgaagcaagaggatgctatcttcgcacgtcgtcggcaagcggatgaaagaaag
caggcaaacgagaagagacgcaaggagcaagatgcagctcgaaacgaagagcgtgctcaa
aagcgaagacggagctccccccagtatgacttaacagctggcgatcgctctcgcggtggc
ggcggcgagcctgtcccacccatggaactcatcacacccggccgaggtcacttgaacaag
gagaccagagagctgacacacagcatggtcatcaaccgtggagctgtgtaccgtgctaac
atggagaataagagcgccgctgctgtgctcaagagtaaactcatgaagggcaaacaggat
ggagctggagacagcgaaactccagccacagacggcgaggatgtatcaagtgaaacccca
gaacaaacttctcccggggttctcggaaaacgaaaggcggatgaagctgaacaggatgtt
accgagataggaacaccgggcagagactctcctctgcccgctactgttgctgctgagaag
cctaaacaagatgagccccaagaagacactgtcaagctgtgggagccaggatatgccgat
cgatactatgagcaaaaattcggcgtggacccgaaagatttagaattccgccaccaggtc
gctcgcgaatatgcgattggtctttgttgggttttgcgctattacttccaggggtgcccc
tcttggacttggtattacccgaggcactatgcgccatttgctgctgatttcgttgatatc
gccgatatggacgtcaaatttgagaagggcacgatatttaaaccatttgaacagctcatg
ggagtcttgcctgcctcatctaaccacgcactgccgaaagttttccatcctctcatggaa
agccccgatagcgagatcatcgatttttacccggaggacttccccctggacttgaacggc
aagaaatttgcctggcaaggcgtgattcttcttcctttcattgacgagactcgtcttctg
aacgccatggcgaaggtatatcctctccttactgaggatgaaaagagtcgcaacactcat
ggtcaggaagttcttctgctatctgaccgaaaccccttgtaccaagaccttgtcgcgaac
ttctactccaagaagcccggtccggcacaatatccccttaaagaggacgtgagtggcggc
cttgccggtattgtcgagcgcagcgagacctatatcccccacagctcgttggtctcgccg
ttggaggcacatggtatgccaggagttgatgacgatcgttctctcacggtcatgtatacg
atcccgaaatcttctcatgtccacaagtctatgcttctacgcggggtgaagctaccgaca
ccaatgctggattcaaacgatatcagagccacccagactcgatcacagaactcgggccga
tcattcggtggcgcacctttccagggcagaggacgtggcggccggatgaactactcgagt
gaccgcccgaacccattcgccgctcatcttgatccgaagttcaattccggcccacaacct
ggtctcggaggtcccggtggggccccaatggtacctcctggatgggttccccctggccaa
gggtacggaggctacgccagaggaccgcctccccctccacgtggcggaatgtcataccag
tacccacctcagcaccctccccaacacggctaccaacaacctggagactattatggccag
caaaatcagtacaaccagggtggtcagtacaacagtggtcatcaaccaggctatggccag
caggattatcgtggaggcagaggaggtaatcgtggaggacgcggccgtggtgggcagcaa
cgagactactactcccacaatcaaggcggaggagggtataatcggtactaa
DBGET
integrated database retrieval system
