Pectobacterium carotovorum subsp. carotovorum PC1: PC1_0051
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Entry
PC1_0051 CDS
T00934
Name
(GenBank) YD repeat protein
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
PAAR_motif
TEN_YD-shell
DUF4595
YwqJ-deaminase
RHS
Motif
Other DBs
NCBI-ProteinID:
ACT11113
UniProt:
C6DGM6
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All DBs
Position
complement(56584..60897)
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AA seq
1437 aa
AA seq
DB search
MLSDILNRVARVGAMHAGKGPTPPAERPQPGQGKAPTSPGKTIKHKSFLGALAGAIAGAV
VAAVVFAAAAAVAGAIAVAVVGTGGMGAALVVGAVKLAVGFGAVSLLGGLISSVSSKVSA
MVDSGSPPFGPVSSGSGTVFAEKQKISRAEVDTVACTKHNSPQLIAQGSETVYVNGSPAA
RIDDKTVCGATIKEGASTVFFGSGQQTCLKISDEFSWWEKALLIAVEFLVPPSRGMFKGL
GKLFTRGPTAVLKGIRMGALRTAVGLRKAVRCASKGFKNNKGLARIKEATRGFLKDPVYI
PSGNVIEMRQDIELGQTLPLLFERTYRSSSTHTGLLGRGWYDTWSETAQVSRDGLNTHVV
ITLAQGYDIDFTFHQDVQSVFCPLYPAFTLYRRAKGFSLWDRDSLTWREFDVPQGDRLLL
SSIHDPHDNRITLIRDPKGYLRKIRHSDDIELLLVWRGESLHQIQRIDTGQKTLLAEYRQ
DEQGRLIEADAAHAYHLFYDYDSENRLTRWHDNDQTWARYEYDYQGRCVYTTCADGYLTA
HFEYLDDRVVMTDGLGQRSEFGFNALSLMSWEKSPLGRITRYDYDDHGNLLREISPAGRV
VEFRYLDDSGLVSAFTDGSGHTWAYDYDEAQRLCGITDPLGRIWQWAFDETGNPEKLTGP
DTREVRFTWNRHGLLTQVSDQAGEVQARLRYDHRQRLLSASDALGRTQQLRYDQQDRVVQ
WQRPDGAQYRLGYRRASWKLPEQLVRPDEKEEKRQYDKHNNLLSYVDGNGALWRQSYGPF
DLLTSRTDAQERTWRYEYDKESQQLVAVIAPDGSRWQWWLDADARVIRERDMAGTDTHYT
YDEDGHCIAIRNGEGETRHFLYDGRGLLIKETAPDDTQYYRYDAAGRLTEVTSTTSHVQL
EYDLRDRVVREWLNGTLLTRQFDDTARTVTRTLVWENESDNALVSAFSYSAAGELQQVQL
PDGAELTLAHDAAGRESSRSGGAFVQHREYDVMGWLAREMSGQQQDGRLHATQTKEYLYD
GAGNLAGVRHNRETRGYRLDATGRVLSVLSGGAGRTVDTDEAYRYTRNGLPQETSRLTEW
QAGRLTQHDDTHYQYDKAGRLIRKQVVQPGYRPQVWHYRWDSRNQLRVVDTPTGERWFYR
YDPFGRRTGKRCEQTQDDIRYLWDGDQIAEVRHYRNGKQIARRHWVHNGWELLVQQRQNT
DGRWETDFVTSSQNGEPQALYKPDGTLRWQAPKSTLWGQRPGSTEDSADPGLAFAGQYRD
SESGLCYNRFRYYDPNGGCYVSPDPIGVLGGESNYAYVPNPNTWVDPFGLAGCSKELAQR
KAQELRDSATSNTQRSKLPRATSAVVDKATGKVYYGFSGRPLPSTIHPHLAERMPSPSLE
RWPVQNCAEFKGVNQALLDGARLENLEVHTVKTISGEAFPMCSNCQTTIFGTIVTSG
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgctgagtgatattctgaaccgcgttgcccgcgtcggtgctatgcacgcaggcaaaggc
ccgacgccgcctgccgaacgtcctcaaccgggccagggaaaagcgccgacatcaccgggc
aaaaccatcaagcacaaaagctttctcggcgcgctggccggcgctatcgctggggcggtc
gttgccgcggtggtttttgccgccgcagcggctgtcgcaggagcgattgccgtcgccgtt
gtcgggacgggcggcatgggtgcggcgctggttgtcggggcagttaaactggcggtggga
tttggtgcagtcagcctattgggagggctaattagcagcgtctccagcaaggtttccgcc
atggtagacagcggatccccgccgtttgggccggtttcttcaggctcaggaacggtgttt
gcggagaagcagaagatttcccgcgccgaggttgacacggtcgcctgtaccaaacacaac
tctcctcaattgattgcgcaaggcagtgagaccgtttacgtcaatggctctccggctgcg
cgtatcgacgataaaaccgtctgtggtgccactatcaaggaaggagcatcaaccgtcttt
tttggttctggacagcaaacctgcctgaagattagtgacgaattcagttggtgggaaaaa
gcgctactgatcgcggtggagtttctggtgccgcccagccggggcatgttcaaagggcta
ggcaagctgtttacccgtggccctactgccgtgctcaaaggcattcggatgggggcgcta
agaacagcggtagggctacgaaaagcggttcgctgtgccagcaaaggctttaaaaataac
aaagggttagcacgcattaaggaagccactcggggctttctgaaagatccggtctacatt
cccagcgggaatgtcatcgaaatgcgtcaggatattgaactagggcaaacactcccccta
ctttttgagcgcacgtatcgatcctcttccacccataccgggttgctggggcgcggctgg
tatgacacttggagcgaaacagcgcaggtcagccgtgatggcctcaatacccacgttgtc
atcacgctggcgcagggatatgacatcgattttacgttccatcaggatgtgcagtcggta
ttttgtccgctctatccggcttttaccctgtatcggcgggcaaagggctttagcctgtgg
gatcgcgacagtctcacctggcgtgaattcgatgtgcctcagggcgatcggctacttctg
tcttcgatacatgacccgcatgacaaccgcattaccctgatccgcgatccaaaaggctat
ctgcgcaagatccgccacagcgacgatatcgagctactgttggtgtggcgaggggaatct
ctgcaccagatacagcgtattgatactgggcagaaaaccctgctggctgaataccgacag
gacgaacagggtcgcctgatcgaagccgatgccgcccatgcctatcacctgttttacgac
tacgacagcgaaaaccgactcacccgctggcatgacaacgaccagacctgggcgcgttac
gaatatgactatcaaggccgctgcgtctataccacctgtgccgacggctacttgacggcg
cattttgagtatctcgacgatcgcgtggtgatgaccgacggactaggtcagcgcagcgaa
tttggttttaacgcgctgtcgctaatgagttgggagaaatccccgttagggcgcatcacc
cgctacgactacgacgaccacggcaacttgctacgtgagatttccccagctggccgggtg
gttgagttcaggtatctggacgatagcggtctggtcagcgccttcactgacggcagcggc
catacctgggcctatgactacgacgaggcgcagcggttatgtggcatcaccgatccgctg
gggcgcatctggcaatgggcgttcgatgagacaggcaacccggagaaactcacgggacca
gatacccgtgaagtccgatttacctggaaccgccatggcctgctgacgcaggtaagcgat
caggccggcgaggttcaggcgcgactgcgttacgatcatcgtcaacgattgctgagcgcc
agcgatgcgctggggcgcacccagcagttgcgctatgaccagcaggacagagtggtgcag
tggcagcggccggacggcgcacaatacaggctaggctatcgtcgtgcgagctggaagcta
ccggagcaactcgtccgtcctgatgagaaagaagaaaaacgccagtacgacaagcataac
aacctgctgagctatgtggacggcaacggcgcactatggcgacaaagctacggtcccttt
gacctgctcacctcacgcacggatgcacaggagcgtacctggcgttacgagtatgacaaa
gagagccagcagctggtcgccgttatcgccccagacggcagccgctggcaatggtggctg
gatgccgatgcacgagttatccgcgagcgggatatggcagggaccgacacccactacacc
tacgacgaagacggccactgcatcgccatccgtaatggcgaaggcgaaactcgtcacttt
ctgtatgacggacgtgggttgctcattaaagaaactgcgccggacgatacccagtattac
cgctatgacgccgcaggcaggctgaccgaggtcacctctaccaccagtcacgtccagttg
gaatatgacctccgtgaccgggtggtgcgggagtggctgaacggcaccttgctcacccga
cagtttgacgataccgcacgcactgtgacgcggacactggtctgggaaaacgagagcgac
aacgcgctggtcagcgccttcagctacagcgcggcaggtgaactgcaacaggtgcagttg
ccggacggtgcggagctcacccttgcccatgatgccgccggacgggaatcgtcgcgttca
ggcggggcgttcgtccaacaccgcgaatatgacgtgatgggctggttggcgcgcgagatg
agcggtcagcagcaggacggtcgactccatgccacacagacaaaggaatacctgtacgac
ggtgcgggcaatctggctggcgttcgccacaatcgtgaaacccggggctaccgtctggat
gccaccgggcgggtgctgtccgtcctgagcggtggcgcaggacggacggtcgatactgac
gaagcctaccgctatacacgcaacggtctgccgcaggagacttcccgactcaccgaatgg
caggcgggtaggctgactcagcacgacgatacccattaccagtacgacaaagccgggcga
ctcatccgtaaacaggtggttcagccgggctaccgcccacaggtctggcactatcgctgg
gacagccgtaaccagctccgggttgtcgacaccccgacgggcgaacgctggttctaccgc
tatgacccgttcggacggcgcaccggcaaacgctgtgagcagacacaggacgatatccgc
tacctgtgggacggcgaccaaatcgccgaggtacggcattatcgcaacggtaaacagatt
gcccgtcgccactgggtacacaacggctgggagctgctggttcagcaacggcagaatact
gacggacgctgggaaaccgattttgtcaccagcagccagaacggtgaaccacaggccctg
tacaaacccgacggcaccctgcgctggcaggcaccgaaaagcaccctctggggccagcga
ccaggctccacggaagactctgccgacccgggacttgcctttgccggacagtaccgtgac
agcgaaagcgggctatgttataaccgttttcggtactacgatccgaatggtggatgctac
gtctcgcctgacccgataggggtgctggggggagaaagtaattatgcttatgtgccgaat
cccaatacatgggttgatccgtttgggttggctgggtgttctaaagaactagctcaaaga
aaagcacaagagcttcgtgatagtgccacatcaaatactcaacgaagtaagttacccaga
gcaacgtctgcggtagtcgataaggccacaggtaaagtttattatggtttcagtgggcga
cctcttcctagtactattcaccctcatttagcagaaagaatgcctagtcctagcttagaa
agatggccggttcaaaactgtgcagaattcaaaggtgtcaatcaggctttgctggatgga
gctaggttagaaaacctggaggttcatacagtgaagactatatcaggtgaggcatttcca
atgtgttcaaattgccaaactaccatatttggtacgatagttacgagtggatag
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