Pectobacterium carotovorum subsp. carotovorum PC1: PC1_0065
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Entry
PC1_0065 CDS
T00934
Name
(GenBank) filamentous hemagglutinin family outer membrane protein
KO
K15125
filamentous hemagglutinin
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pct00536
]
PC1_0065
Glycosaminoglycan binding proteins [BR:
pct00536
]
Heparan sulfate / Heparin
Microbial pathogens
PC1_0065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF637
TPS
Fil_haemagg_2
Motif
Other DBs
NCBI-ProteinID:
ACT11127
UniProt:
C6DGP0
LinkDB
All DBs
Position
complement(76395..81566)
Genome browser
AA seq
1723 aa
AA seq
DB search
MEKFNNRATRGLSYLLIYLTAIQPLHPAFAALTPDGPRTQVNNAGAVPVINIATPNAAGV
SHNTYKDFSVGTPGAVLNNSIAAGQSQLAGQLNANANLNGKAAELIINEVTGSTRSDLQG
KIEVFGHKANVLIANPNGITCDGCGFINTPSATLTTGKPVLDQQGALEALEVKKGSITIG
GKGLDGSATDYVDILSRATELNGKINAKNLTLTQGSNRVDVKTGTVAPIAGEGAKPLLAV
DTKALGGMYAERIRLVATEDGVGANVANLTSSQQGITLDSKGKIQLGNVHAKTDLNLTAQ
QVDIAAGNTVKSDRDITLASTVLNNRGNIIAGEDMRLFNDSLTNTQATIQANNNLWIQKD
ATGNKGVKVENRSGTIKTNTGDLVIRTEQLDNVVEQFSVNKISTPANSTSIDGQFGIMID
GTGPDSFVTIYTGVVDDRNLRWIGSFKFTESPYANTEKNKYTFISSREGNISSGKNIYIN
SSELNNKYSTISALGDIISTGKNANILNHSIGDSNSYVKLALKFDERDIGIDISPIPAGF
NVDEYPLWGDAPVPLVRDGNKKTWFEKEYVSSKIHAGGSLVLDFTDTIKIEDNAPENLTE
LSEKIYSTPHSYSITGKEIIFKSKDIKNQSSVKSTGNLSLLSEGNIKLTGGELNSAGDLS
ILASNGIDANQNKFLGRNITIISREGDTSLYTDSAAKHFSVDGVRQFSTLNATENLSIQS
GKDILLNGIEIGKAKNISLISGNNITVKNDEAILDPQKIGSTFTDPEKQKKFDYAFNHLG
NITSTDSITLNARNVLDIAGISLEATKDINLTAGDNINLNPREVNTIPEALFANSRQTEL
SSTINAGNQLLISSGKDLLAQSASLSANGNVALLAGNSLKLLATAYSAIDSQNDNNKDDR
NVTAKVHAGKNLTVASNGELIATGTDFSSGGDMTLSSGGKMEFNAVANHIYREGSNEYSE
SVTQKNVVLNSSGILTLLSNGSILFQATQLLAKGTLDAAAKGGFLYAQAVEESNHYEKTT
TKRKWYGKKTTIRQTSHNVTNKVTEFTAGGDINLLSRDDSTYEASKINAGKNAKLTSTQG
SINFKAVKDTAFEQTITTSKGFFIKSNDKGYTKDTWLLPSIYSGGQLTIDAATGITADAK
TQNAQSLQNALLTLGNNPGTAWLKDLNARPDVQWNAVQDAYSTWNHTTQSLNPVVGAVIA
IAVAAVTAGTGLAAAAGQLAAGAVGTGASATTIAVVNGAAYSGMTALTSQAAVALVDNKG
NLSKTFQAMSSSDSVKSLVTSMVIGGALAGFDEVMQFSQAANGTTVIDPAKAKLPMLSNG
DWSKVAQRVAGQSVISSSIGTAINGGSFKDNFTTALLSNIGSQINAEGAKFIGDKGEVLG
ITGKTISHAVVAGVAAEISGGNVKGAAAGALAAELAAISLGNTFVDPALREIQITSTGRI
IGALAGAAITGKATGVNSGASAAESVLLYNFLMHDEPKTLAEKYAACKGSSDCESNVRKE
MNQTSVKNQEIFEGCRAAGNATCVNDMLYGISEASGYDELGRLIGFDLSNSYKEMGQNAY
DRANICGGDMSYGCGLKLWADQLPEELLGGILSWGIGKAVSPLIGKYFTETGILSAKETA
NRLVNGKWVDANGLPLPVPPSVGAAGRVPVVLQTGGHTITARTANGLNKEFNKNLTSREW
GRALESLKDDYSLRHDFHGRILDNGNYIDKAGKIIGNIEDYLP
NT seq
5172 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaattcaataaccgcgccacacgcggacttagctatctgctgatctatctgacc
gcgattcagccgttacaccccgcgttcgcggcactcacaccagacggcccacgcacgcag
gtcaacaacgcgggcgccgtcccggtcatcaatatcgcgacgccaaacgcagcgggtgtt
tctcacaatacctataaagattttagcgtcgggacgcccggtgccgtactcaacaacagc
attgccgcaggccaatcgcagttggccgggcagttaaacgctaacgccaacctcaatggc
aaagcggccgagctgattatcaacgaggtgacgggctcaacccgttcagacctgcaaggg
aagatcgaagtcttcgggcataaagccaacgtattgattgccaacccgaatggcattacc
tgtgatggatgtgggttcatcaacacaccttcagccacgctgacgacgggtaaaccggtg
ctggatcagcaaggcgccctggaagcgttggaagtgaaaaaaggcagcatcaccattggt
ggaaaaggcctggacggttcagcaacggattatgtcgatatcctcagccgggcaactgaa
ctgaacggcaaaatcaacgcaaaaaacctgacgctgactcaaggcagcaatcgggtcgat
gtcaaaaccggcacggtcgcccccatcgccggagaaggtgccaaaccgctgctggcggtg
gataccaaagcgctcggcggtatgtatgcagaacgcatccggcttgtggcaaccgaggac
ggagtcggcgctaacgtcgctaacctgaccagctctcagcaaggcattacgctggacagc
aaaggtaaaatccagctcggtaatgtgcacgcgaaaaccgaccttaatctgaccgcacag
caggtcgatattgctgctggcaatacggtgaaaagcgaccgagatatcacgcttgccagt
accgtattaaataaccgagggaatatcatcgcgggcgaagatatgcgcctgttcaacgat
agcctaaccaacacgcaggccactattcaggccaacaacaacctgtggatccaaaaagac
gcgacggggaacaaaggcgttaaagtcgaaaaccgctcggggacgattaaaaccaatacg
ggggatttggtgattcggactgagcagttggataatgtcgtcgagcagttctcggttaat
aaaatcagcacaccagcaaattcaacatcaattgatggccaatttggaataatgattgat
ggcacgggacctgattcattcgttaccatctatactggtgtagtagatgataggaatcta
cgttggattggcagttttaaatttacagaaagtccttacgctaatacagaaaaaaataaa
tacacatttatttccagcagggaaggaaacatttcatcaggaaaaaatatctatataaac
tcatctgaactgaataacaaatacagtactatttccgcacttggagacattatctccact
ggaaaaaatgcaaatatacttaaccattcaatcggtgattcaaatagttatgttaaatta
gcccttaaattcgacgagagggacattggcattgatatttcaccaatccctgctggtttt
aatgtcgatgaatatccattatggggagatgcaccagttcccttggttcgggatggcaat
aaaaaaacctggtttgaaaaagaatatgttagtagcaaaatacatgcaggtggcagtctt
gttttagatttcactgatacaataaagatcgaggataacgcccccgagaatcttactgaa
ctttctgagaaaatttactcaacgccacattcctatagcatcacagggaaagaaattatc
tttaagtccaaagatataaaaaaccaaagttccgtaaagtcaacaggaaatctgagtcta
ttatctgaaggaaatataaaactaactggtggtgagctgaactcggcaggtgatctttct
atcctcgcaagtaatggcattgatgcaaatcaaaataaattcttaggaagaaatattaca
attataagtcgtgaaggagatacttcactttataccgacagcgccgcaaagcatttctcc
gttgatggagttcgtcaattcagtacattaaatgcaacagaaaacctatctattcagtcg
gggaaagacattctattaaatggcattgaaataggaaaagcaaaaaatatttcacttatt
tcaggaaataacattacagttaaaaatgatgaggctattttagaccctcaaaaaattggc
agtacgttcaccgatcccgaaaaacagaaaaaatttgattatgcttttaaccaccttggg
aacattacttcaacagacagcattacgttaaatgccagaaacgtgctggatatagcaggt
atttcactggaggcgactaaagatatcaacctgacagcgggggataatatcaatctaaat
ccaagggaggtcaacacgattcccgaggcgttatttgccaactcgcgacagaccgaactc
agcagtactatcaacgccggaaatcagctattaatttctagcggaaaagacttgcttgca
caatccgctagcttatccgccaatggcaatgtagctctactcgcaggcaatagcttgaaa
ttgctcgctacggcctactccgcaattgacagtcagaacgataataataaagacgaccga
aatgttaccgccaaggttcatgcgggcaaaaacctgacggtagcttccaatggagagctg
atcgcaaccggaaccgatttctcttccggcggcgatatgacattaagttccggtgggaaa
atggaatttaacgccgtggctaatcatatctatcgagagggaagcaacgaatatagcgag
tccgtcacgcaaaaaaatgtcgttttaaacagcagtggaatactcaccctattatccaac
ggcagcattctcttccaagcgacccagttgctcgccaaaggcacgttagatgccgcagcc
aaaggcggtttcctttacgcacaagcggtagaagaaagtaaccattacgagaaaaccacc
accaagcgcaaatggtacggcaagaaaaccaccattcgacaaaccagccacaatgtaacg
aacaaagtgacagaattcaccgcaggcggtgatattaatctgctcagccgtgatgacagc
acctatgaagccagcaaaatcaacgcgggcaagaatgccaagctgaccagcacacaagga
agcattaacttcaaggcggtcaaagacaccgcattcgagcagacgatcaccacctcaaaa
gggttcttcatcaagagcaatgacaaaggctataccaaagacacctggttgcttccaagc
atctactctggcggccaactgacaattgatgccgctactggcattactgctgatgcaaaa
acccagaatgcgcagtccctgcaaaatgccctactaacactaggtaataaccccggcaca
gcctggctgaaagatttaaatgcccgccccgatgtgcaatggaacgcggtacaagatgct
tacagtacctggaaccacaccacacaaagcctgaaccccgttgtaggtgcagtgattgcc
attgccgttgcagcggtaaccgcaggcacaggactggcagcagcagcgggtcagttggct
gctggtgctgtgggaacgggagccagcgcgacaacaatcgctgtcgtaaacggtgcagct
tattcaggcatgacggcactgacctcgcaggcagcagtcgcgctggtggataacaaaggc
aacctatccaaaacgttccaagccatgagcagcagtgactcggtcaaatcactggttacc
tcaatggtgatcggcggtgcattagcaggattcgatgaagttatgcagtttagtcaggct
gctaacggtacaaccgtcatcgatcccgctaaagccaaattgcccatgctcagcaacggt
gactggagcaaggtcgcgcagcgtgtcgctggacagtcagtgatcagttccagcatcggc
accgcaattaacggcggtagcttcaaagataatttcaccacggcgctcttgagtaatatc
ggcagtcagatcaatgcggaaggggcgaagttcattggggataagggagaagtcctcggc
ataacgggcaaaacgattagccatgccgtcgtcgcgggcgtagcggctgaaatcagtggt
ggtaacgtcaaaggcgcagcagctggtgcattggcggcagagctagcggcaatcagttta
ggtaatactttcgtcgatccagccttaagagaaatacagataacctctactggcagaatt
attggtgctttggctggagccgctattaccggcaaagccactggtgttaatagcggtgct
agtgctgccgaaagtgtcctgctatataacttccttatgcatgatgagccaaaaacactc
gccgaaaaatacgctgcatgtaaaggcagtagcgattgtgagagtaatgtacgcaaggag
atgaatcaaacatcagtaaagaaccaagagatatttgaaggatgccgagcagcaggtaat
gccacttgtgttaatgacatgctttacggaatttccgaagcatcaggttacgatgagctc
ggcaggttgattggcttcgatctctctaattcttataaagaaatggggcaaaatgcttat
gaccgcgccaatatctgtggcggggatatgagttacgggtgtggcctaaaattgtgggcc
gaccaactacctgaagagctgctaggtgggatactctcttggggtattgggaaagctgta
agccccttaattggtaaatattttactgaaacaggcatactatctgctaaagaaaccgct
aatcgactggtgaatggcaaatgggtggatgctaatgggcttccacttcctgttccacca
agtgttggcgcggcaggaagagtgcccgttgtattacaaactggaggacatacgattact
gcaagaacagctaatggtttaaataaagaatttaacaaaaacctgaccagtagagaatgg
ggaagagctttagaatcattgaaggatgattacagtttacgacatgactttcatgggcga
atattagacaatggaaattatattgataaagcgggtaaaataattggtaatattgaggat
tacttaccatga
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