| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase, beta' subunit
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| KO |
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| Organism |
pct Pectobacterium carotovorum subsp. carotovorum PC1
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:pct00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PC1_0206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:pct03021]
PC1_0206
03400 DNA repair and recombination proteins [BR:pct03400]
PC1_0206
Enzymes [BR:pct01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PC1_0206
Transcription machinery [BR:pct03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PC1_0206
DNA repair and recombination proteins [BR:pct03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PC1_0206
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
243588..247811
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| AA seq |
1407 aa
MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVVEGGMTNLERRQILTEEQYLDALEEFGDEFDAKM
GAEAIQALLKNMDLEQECEQLREELTETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERVYRAG
LASLHARVKVRITEEIKSIEGDVTHQTSIIDTTIGRAILWMIVPKGLPYSIVNQPLGKKA
ISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPEKKAEIIEEAETE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANERVAKAMMENLSVEDVVNRDGVVEQQVSFN
SIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTHEGIMMTPVIEGGDVKEPLRERVL
GRVTAEDVIKPGTADILVPRNTLLNEQWCDMLEENSVDAVKVRSVVSCETDFGVCANCYG
RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSLKL
SNAKFVVNSNGKLVITSRNTELKLIDEFGRTKESYKVPYGAAMAKGDGAEVSGGETVANW
DPHTMPVITEVSGNIRFTDMIDGQTITRQTDELTGLSSIVVLDSAERTGSGKDLRPALKI
VDDKGEDVLIPGTDMPAQYFLPGKAIVQLEDGVKISSGDTLARIPQESGGTKDITGGLPR
VADLFEARRPKEPAILAEISGIISFGKETKGKRRLVISPLDGSDAYEEMIPKWRQLNVFE
GEVVERGDVVSDGPESPHDILRLRGVHAVTRYITNEVQEVYRLQGVKINDKHIEVIVRQM
LRKGTIVNAGSTEFLEGEQAEVSRIKIANRQLEADGKITATFSRDLLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRQAGEAPI
VPQVSADEASANLAELLNAGFGSSDDE |
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| NT seq |
4224 nt +upstreamnt +downstreamnt
gtgaaagacttattaaagtttctgaaagcgcaaactaaaaccgaagagtttgatgcgatc
aaaattgctctggcctcgccagacatgatccgttcgtggtcttttggtgaagttaaaaag
ccagaaaccatcaactaccgtacgtttaaacctgaacgtgacggccttttctgcgcccgt
atctttgggccggtaaaagattatgagtgcttgtgcggtaagtataagcgcctgaaacac
cgcggtgttatttgtgagaagtgcggcgttgaagtgacccagaccaaagtgcgccgtgag
cgtatgggccacatcgagctggcttctccgactgcgcacatctggttcctgaagtcactg
ccttcccgtatcggtttgctgctggatatgccgctgcgtgatatcgagcgtgtgctttat
tttgaatcttatgtcgtggttgaaggcggcatgaccaaccttgagcgccgtcagatcctg
actgaagagcagtatctggatgcgctggaagagtttggtgatgaattcgacgcgaaaatg
ggcgccgaagcgatccaggctctgctgaagaacatggatctggagcaggaatgcgagcag
ctgcgtgaagagctgaccgaaaccaactccgaaaccaaacgtaagaagctgacaaagcgt
attaaactgctggaagcattcgtacagtctggtaacaaaccagagtggatgatcctgacc
gttctgccggtactgccgccagatctgcgtccgttggttccgctggatggtggtcgtttc
gcgacttccgacctgaacgatctgtatcgtcgcgtgatcaaccgtaacaaccgtctgaaa
cgtctgctggatctggctgcgccagacatcatcgtacgtaacgaaaaacgtatgttgcag
gaagcggttgatgcactgttggataacggccgtcgcggtcgtgcgatcaccggttctaac
aaacgtcctctgaaatctttggccgatatgatcaaaggtaagcagggtcgtttccgtcag
aacctgcttggtaagcgtgttgactactccggtcgttctgtaatcaccgttggtccatac
ctgcgtctgcatcagtgtggtctgccgaagaaaatggcactggagctgttcaaaccgttc
atctacggcaagctggaactgcgtggtcttgctaccaccattaaagccgccaagaaaatg
gttgagcgtgaagaagccgtcgtatgggatatcctggacgaagtcatccgcgaacacccg
gtcctgctgaaccgtgcaccaacactgcaccgtttgggtattcaggcatttgaaccggta
ctgattgaaggtaaggcaatccagctgcacccgctggtttgtgcggcatataacgccgac
ttcgatggtgaccagatggctgtacacgtaccgttgacgctggaagcccagttggaagcg
cgtgcgttgatgatgtcgaccaacaacatcctgtcccctgcgaatggtgagccaatcatc
gttccttctcaggacgtggtattgggtctgtattacatgacgcgtgactgtgttaacgcc
aaaggcgaaggcatggtgctcacgggtccgaaagaagctgaacgcgtttatcgtgccggc
ctggcctctctgcatgcgcgcgttaaagtgcgtatcacggaagagatcaagagcatcgaa
ggcgatgttacgcatcagacgtcgattattgatacgactatcggccgtgccatcctgtgg
atgatcgtaccgaaaggtctgccgtactcgatcgttaaccagcctttgggcaagaaagcg
atctccaaaatgctgaacacctgttaccgcattttgggtctgaagccgacagttatcttc
gctgaccagactatgtacaccggttttgcttacgcggcgcgctctggtgcttccgtaggt
atcgatgacatggttatcccggagaaaaaagccgagattatcgaagaagccgaaaccgaa
gtggccgagattcaggagcagttccagtccggtctggttactgcgggcgaacgctataac
aaagtgatcgatatctgggctgctgcgaacgaacgtgttgcgaaagcgatgatggaaaac
ctgtccgttgaggatgtggttaaccgtgatggcgtggttgagcagcaggtatctttcaac
agcatctttatgatggccgactccggtgcgcgtggttctgcggcacagattcgtcagttg
gcgggtatgcgtggtctgatggcgaaaccagatggttccatcatcgagacgccaattacc
gcaaacttccgtgaaggtctgaacgtactccagtacttcatctcgacgcacggtgcgcgt
aaaggtctggcggataccgcactgaaaacggcgaactccggttatctgactcgtcgtctg
gttgacgttgcgcaggatctggttgtgaccgaagacgattgtggtacccatgaaggtatc
atgatgacgccggttatcgagggtggtgatgttaaagagccactgcgtgagcgcgtactg
ggtcgtgtaacggctgaagacgtgatcaaaccgggcacggcggatattctggttccacgt
aacacgctgctgaacgagcagtggtgtgacatgttggaagagaactccgttgacgccgtt
aaagtacgttccgttgtaagctgcgaaaccgactttggcgtgtgcgccaattgctacggt
cgcgatctggctcgtggtcatatcatcaacaaaggtgaggccatcggggttatcgcggca
cagtccatcggtgaaccgggtacacagttaaccatgcgtacgttccacatcggtggtgcg
gcatcgcgtgcggcagctgagtccagcattcaggtgaaaaacaagggtagcctgaaactg
agcaacgcgaagttcgtcgtgaacagcaacggtaaactggttattacttcacgtaatacc
gaactgaaactgatcgacgaattcggacgtactaaagaaagctataaagtgccttatggt
gcggcaatggcgaaaggtgatggtgcagaagttagcggtggcgaaaccgtagctaactgg
gatccacataccatgccagttatcaccgaagtgagcggtaacattcgcttcaccgatatg
atcgacggtcagacgattactcgtcagaccgacgaactgaccggtttgtcctctatcgtg
gttctggatagtgcagagcgtaccggtagcggtaaagacctgcgcccggcactgaaaatc
gttgatgacaaaggtgaagacgtactgattccaggtacggatatgcctgctcagtacttc
ctgccgggcaaagcgatcgtgcagttggaagacggcgtgaaaatcagcagcggtgatact
ctggcgcgtattcctcaggaatccggcggtaccaaggatattaccggtggtctgccacgc
gtagccgacctgttcgaagcccgtcgtccgaaagagccggctattctggcagagatcagc
ggtatcatttccttcggtaaagaaaccaaaggtaaacgccgtctggtgatttctccgttg
gatggcagcgatgcttacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaa
ggtgaagtggtggaacgtggtgacgtggtttccgacggcccagagtctccgcacgatatc
ctgcgtctgcgtggcgtacatgcagtaacgcgttatatcaccaacgaagttcaggaagtt
taccgtctgcaaggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatg
ttgcgtaaaggcaccatcgttaacgcaggtagcaccgagttcctggaaggcgaacaggca
gaagtgtctcgcatcaagattgccaaccgtcagttggaagcggatggcaagattacggca
acgttcagccgcgatctgctgggtattaccaaagcatctctggcgaccgagtccttcatt
tctgcggcatcgttccaggaaaccactcgcgtactgaccgaagccgctgttgcgggtaaa
cgtgatgaactgcgtggcctgaaagagaacgttatcgtgggtcgtctgatcccagcgggt
acgggttatgcgtaccatcaggatcgtatgcgccgccgtcaggcgggtgaagcgccaatc
gtacctcaggtgagtgccgatgaagcttctgctaacctggcagaactgctgaacgcaggc
tttggtagcagcgacgacgaataa |
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