Pectobacterium carotovorum subsp. carotovorum PC1: PC1_0216
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Entry
PC1_0216 CDS
T00934
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct00730
Thiamine metabolism
pct01100
Metabolic pathways
pct01240
Biosynthesis of cofactors
Module
pct_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PC1_0216
Enzymes [BR:
pct01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
PC1_0216
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ACT11276
UniProt:
C6DHS6
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All DBs
Position
complement(255336..257291)
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AA seq
651 aa
AA seq
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MSTDPLSINTVSSKSGRREQRAAAQQFIETLQGTAFPNSKRIYLTGSRDDIAVPMREIQL
SPTLLGGSKDNPQYEPNEPIPVYDTSGPYGDPAAQPDVRIGLAKLRASWIAERSDTEALS
GVSSDFTQQRLADAGLDHLRFEHLPRPLRAKAGKRVTQLHYARQGIITPEMEFIALRENM
GRERIRTDVLRQQHPGQSFGALLPENITPEFVRQEVAAGRAIIPSNINHPESEPMIIGRN
FLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPI
GTVPIYQALEKVNGVAENLNWEMFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGI
VSRGGSIMAKWCLSHHKESFLYEHFREICEICAAYDVALSLGDGLRPGSIQDANDEAQFA
ELHTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAP
GYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHP
GAQIRDNAMSKARFEFRWEDQFNLALDPQTARAYHDETLPQESGKVAHFCSMCGPKFCSM
KISQEVRDYAAKQEAEAKPIEVGMAQMSQEFRSRGSELYHSATSLQAEENQ
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtctacagaccccttgtctataaacacagtgtcgtcaaaatcgggtcgccgcgagcag
cgtgccgccgcccagcagtttattgaaaccttacagggaacggcctttcccaattccaaa
cgcatttatcttacgggctcgcgcgacgacatcgccgtaccgatgcgggaaattcagctc
agcccgacgctactcggcggcagcaaagacaacccccagtacgaacccaatgaaccaatc
ccggtttacgatacgtcagggccttatggcgaccccgcagcccaacccgatgtccgcatt
ggcttagcgaagctgcgcgccagctggattgcagaacgcagcgacaccgaggcactctct
ggcgtcagctccgatttcacccagcagcgtctggcagatgcggggcttgatcatctgcgc
tttgaacacctgccacggccgctgcgtgccaaagcaggcaaacgtgtcacccagctccac
tatgcgcgacagggaatcattacccccgaaatggaatttatcgcccttcgcgaaaacatg
ggacgcgagcgtattcgcaccgacgtgctgcgtcagcagcatccagggcaaagttttggc
gccctactgccggagaacatcacgccggaatttgtccgtcaggaagtggccgccgggcgc
gccatcatcccttccaacatcaatcacccagaatcagagccgatgattatcggacgcaat
tttctggtgaaggttaacgccaatattggtaactccgctgtgacatcctccatcgaagaa
gaggtggaaaagctggtctggtctacccgttggggcgcggatacggtgatggatctctca
accggccgctatattcatgaaacccgcgagtggattctgcgtaacagtcccgtgccaatc
ggaaccgtaccgatctatcaggcgctggaaaaagttaacggcgtggcggaaaacctgaac
tgggaaatgttccgcgacacgctgctggagcaagcggaacagggcgtggactatttcact
atccacgccggcgtgctgctgcgctacgtgccgatgacggccaaacgcctgaccggcatc
gtttcgcgcggtggctcgattatggcgaagtggtgcctatcgcatcataaagagagcttc
ctgtacgaacacttccgtgaaatctgtgaaatctgcgccgcttatgacgtcgcgctgtca
ctgggtgatggtttacgccccggttctattcaggatgctaacgacgaagcccagtttgcc
gagctgcatacgctgggcgagctgaccaaaatcgcctgggaatacgacgtacaggtgatg
atcgaaggccccggtcacgttccaatgcaaatgatccgccgcaacatgaccgaagaactg
gagcactgccatgaagccccgttctatacgctcggcccgttaaccaccgatatcgcaccg
ggttacgatcacttcacctccggtattggcgccgccatgatcggctggttcggctgcgcg
atgctctgttacgtcacgccgaaggagcatcttggcttacccaataaagaagacgttaag
cagggactaattacctacaagatcgccgcccacgccgcagatttggcaaaaggtcatccc
ggtgcgcagatccgtgataacgccatgtcgaaagcacgtttcgaattccgctgggaagac
cagttcaatctggcgctcgatccccaaacggcacgcgcctaccacgatgaaacgctgccg
caggaatccggaaaagttgctcacttctgctctatgtgcggtcctaaattctgctcgatg
aagatctcacaggaagtacgcgactacgccgcaaaacaggaagcggaagccaaaccgatt
gaagtaggcatggcacagatgtcgcaggaattccgctctcgcggcagtgagctgtatcac
agcgccaccagcctgcaagccgaggaaaaccaatga
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