Pectobacterium carotovorum subsp. carotovorum PC1: PC1_0271
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Entry
PC1_0271 CDS
T00934
Name
(GenBank) conserved hypothetical protein
KO
K06958
RNase adapter protein RapZ
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pct03019
]
PC1_0271
Messenger RNA biogenesis [BR:
pct03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PC1_0271
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_22
AAA_16
AAA_28
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
ACT11330
UniProt:
C6DIN0
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All DBs
Position
complement(320649..321506)
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AA seq
285 aa
AA seq
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MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPELANTLAARNISAAVSIDVRNM
PESPEIFEHAMEQLPPSFSPQLLFLDADRNTLIRRYSDTRRLHPLSSKNLSLESAIDEES
DLLEPLRSRADLIIDTSEMSVHELAEMLRTRLLGKRERELTMVFESFGFKHGIPIDADYV
FDVRFLPNPHWDPKLRPMTGLDKPVASFLDRHTEVHNFIYQTRSYLELWLPMLETNNRSY
LTVAIGCTGGKHRSVYVAEQLADYFRSRGKNVQSRHRTLEKRKPS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgatgattgtcagtggtcgctcaggttcagggaaatctgtcgccctgcgcgca
ctggaagatatggggttctactgcgtagataacctgccagtggttctactgccggagctg
gctaatacgcttgcggcacgtaacatttccgcagcagtcagcattgatgtgcgtaatatg
ccggagtcgccagagatcttcgagcatgccatggagcaactgccacctagcttctcgcct
caattgctgtttctggatgccgatcgcaatacgttgatccgccgctatagcgatactcgc
cgcctgcatccgctatccagcaagaatctgtcgctggaaagcgccattgatgaagaaagc
gatctgctggagccgctgcgctcacgcgctgacctgattatcgatacctcagagatgtcg
gtacatgaactggctgagatgctgcgcacccgactgctcggcaagcgagaacgtgaactt
acgatggtgttcgaatcgttcggcttcaagcacggtattcccatcgatgcggattacgtc
tttgacgtacgtttcctgccgaacccacactgggatccaaaactgcgcccgatgacgggt
ctggataagcccgttgcgtccttcctcgacaggcataccgaagttcacaatttcatctac
cagacccgcagctatctggaactgtggctgccgatgctggaaaccaataaccgcagctat
ctgactgtcgccattggctgtaccggcggtaaacaccgttccgtctacgtcgccgagcag
ttggcagactacttccgctcacgcggtaagaacgtccagtcgcgccatcgtacgctggaa
aaacgtaaaccctcgtaa
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