Pectobacterium carotovorum subsp. carotovorum PC1: PC1_0421
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Entry
PC1_0421 CDS
T00934
Name
(GenBank) transcriptional regulator, AraC family
KO
K02855
AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pct03000
]
PC1_0421
Transcription factors [BR:
pct03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PC1_0421
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
ACT11477
UniProt:
C6DJR4
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Position
484772..485611
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AA seq
279 aa
AA seq
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MTLLRGDDFFTSRAVTVAVEPRTPQTAFPEHYHDFWEIVLVEQGAGVHVFNDQPYALCSG
SVFFVRDNDRHLFEDVEGLCLTNMLYRSPRGFRFLSDIAAFLPYGPNGEWQGQWQVNAAG
MQQLKQSLNSLAELAQSDAPEAIAASESLFLHILVQLRQQCFQTQSSGSERQGVQALLGW
LQNNYSEEVNWGSLADRFSLPLRTLHRQLKQHTGMTPQRYLNRLRLLEARRRLQQSDDSI
TTIAHACGFSDSNHFSTQFRKAFSQAPKSLRHQAFSREE
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgacgttacttcgtggtgatgatttttttacttcgcgtgccgtaacggtggcggtagaa
ccgcgtactccgcaaacggcttttcctgagcactaccatgatttctgggagattgtgctg
gtggagcagggcgcaggcgtccatgtgtttaacgatcagccttatgcactgtgcagcggt
tcggtgttctttgttcgtgataacgatcggcatctgtttgaagacgtggaagggctgtgt
ctgactaacatgctgtatcgctcgccgcgcgggttccgcttcctttccgatatcgccgca
ttcttgccgtatggcccgaacggcgagtggcaggggcagtggcaggtcaatgccgcgggg
atgcagcagttgaagcagtcgttgaacagtctggcagaactggcgcagagcgatgcaccg
gaagcgattgccgccagtgagagcctgtttctgcacattctggtgcaattgcgtcaacag
tgctttcagacgcagagcagtggttccgagcgtcagggagtacaggcgttgctgggttgg
ttgcaaaacaactacagcgaagaggtgaactggggcagtctggccgatcggttctcgctg
ccgctgcgcacgctgcatcgtcagctcaaacaacacaccggtatgacgccacaacgctat
ctgaatcggttaagattactggaggcacgtcggcggttgcagcagagtgatgattccatc
accaccattgcgcacgcctgtggatttagcgacagcaatcacttctcgacgcaattccgc
aaggcattctcgcaggcgcctaagtcactacgccatcaggcgttttctcgtgaagagtag
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