Pectobacterium carotovorum subsp. carotovorum PC1: PC1_0425
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Entry
PC1_0425 CDS
T00934
Name
(GenBank) ABC transporter related
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PC1_0425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pct02000
]
PC1_0425
Transporters [BR:
pct02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PC1_0425
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
AAA_16
AAA_29
nSTAND3
nSTAND1
DUF87
NB-ARC
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
ACT11481
UniProt:
C6DJR8
LinkDB
All DBs
Position
complement(487195..488904)
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AA seq
569 aa
AA seq
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MSLNPLPHPSHTASDASAKTPLLHVDGLSVTFPSPFGPIRSVKNLSFQVNAGEILALVGE
SGSGKSVTARTLVGLAGENVDVQANAIELTRHDGSLCDLRYLTDRDWRTIRGREIGFVLQ
DALVSLDPLRKIGQEVAEPILTHHLLPRQQVPARVAELLTKAGIPDPEHRAVQYPHELSG
GLRQRALIASALAAGPQLLIADEPTTALDATVQKQVLKVFTALAQAGHGVLLITHDLAVV
AEVADRVIVMQQGSLVEGGEARQILSAPTHPYTRKLLAAIPTASTRGKWLAGTDPLQNGM
APSSASLAADHASTDDTIALTADRIAVSFKRPDGSRMQAVNQVSLQIKRGETLGIVGESG
SGKTTLGKVILALQKPDSGEVRLADNAWSTLTERERRPLRARIQTITQDPLSSFDPQFTV
AQILNQPLRLRRDLSDDEKQRRILTLLEYVGLTPDLLSRRPRALSGGQRQRVSIAQALAS
EPEILICDEPVSALDVTTQAQVLDLLVALQRQLGLTMLFISHDLGVVQHMSHRIAVMKDG
DIVETGPVEQIFNQPQHPYTRLLLSTVAE
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgaatccacttcctcacccctctcataccgcttcagacgcatccgcgaagacg
ccgctgctgcacgtagacggcctgagcgtcacgtttcccagccctttcggccccattcgt
tcggttaagaacctctcttttcaggtaaatgctggtgaaattctggcgctggtcggcgag
tcgggttcaggaaaatctgtcaccgctcgcacactggtgggtctggccggtgaaaacgtt
gacgtacaggccaacgccattgaactcacgcgccatgacggcagcctgtgtgatttacgt
tatctaaccgatcgcgactggcgaacgattcgcggccgtgaaatcggctttgttttgcag
gatgcgctggtgtctctcgacccgctgcgcaagatcgggcaggaagtcgccgaaccgatt
ctgacccaccacctgttgcctcgccagcaggttcctgcacgcgtagccgaactcctgacg
aaagcaggtattcccgacccagagcatcgcgcggtgcagtatccgcacgaactgtctggc
gggctgcgtcagcgtgcgcttattgcttctgcattagcagcaggcccacagttgctgatt
gccgatgagccgactaccgcgctggatgccacggtgcaaaagcaggtgctgaaggtgttc
accgccttagcgcaggcagggcatggcgttttactgatcactcacgatcttgccgttgtc
gcagaagtggcggatcgcgtcatcgtcatgcagcaaggatcgctagtcgaaggcggcgag
gcgcggcagatcctgtcagcaccaacacatccctacacgcgtaaattactggcggcgatc
cccaccgcttccacacggggaaaatggctggccggtactgacccgttacagaacggcatg
gccccgtcatcggcttcactggcagcggatcacgccagcaccgatgacaccattgctctg
acagcggatcggatcgcggtgtcgttcaagcgtccggacggcagccggatgcaggccgtc
aatcaggtttctctccagatcaagcgcggtgaaacgctgggcatcgtcggcgaatccggt
tcaggtaaaaccacgctgggcaaagtcattctggcgctgcaaaagccggacagcggcgaa
gttcgactcgcggacaatgcctggagcacattaacagagcgcgaacgtcgaccactgcgc
gcacgcattcagacgatcacacaagatccgctcagttcgttcgatccgcaatttactgtc
gcacagattctgaaccagccactgcgtttgcgccgcgatctcagcgacgatgagaaacag
cggcgcattctgacgctgctggagtatgtcggtttgacgcccgacctgctgagccgtcgt
cccagagcgctgtcaggcgggcagcgacaacgcgtttccattgcacaggccttggcttcg
gaacccgagattctgatctgcgacgaaccggtatcagcgctggatgtcaccacacaggcg
caggtgctggatttgctggtcgcgctgcaacgccagttagggctaacgatgctgttcatc
tcccacgatctgggcgtagtgcagcacatgagccaccgcatcgcggtcatgaaagacggg
gatatcgtagaaacagggccggtcgagcagatcttcaatcagccgcaacacccttacacg
cgcctgctgctttcaacggtggcggagtag
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