Pectobacterium carotovorum subsp. carotovorum PC1: PC1_0509
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Entry
PC1_0509 CDS
T00934
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PC1_0509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pct03019
]
PC1_0509
03110 Chaperones and folding catalysts [BR:
pct03110
]
PC1_0509
03029 Mitochondrial biogenesis [BR:
pct03029
]
PC1_0509
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pct04147
]
PC1_0509
Enzymes [BR:
pct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PC1_0509
Messenger RNA biogenesis [BR:
pct03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PC1_0509
Chaperones and folding catalysts [BR:
pct03110
]
Heat shock proteins
HSP60 / Chaperonin
PC1_0509
Mitochondrial biogenesis [BR:
pct03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PC1_0509
Exosome [BR:
pct04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PC1_0509
Exosomal proteins of other body fluids (saliva and urine)
PC1_0509
Exosomal proteins of breast cancer cells
PC1_0509
Exosomal proteins of colorectal cancer cells
PC1_0509
Exosomal proteins of bladder cancer cells
PC1_0509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ACT11564
UniProt:
C6DKC7
LinkDB
All DBs
Position
592347..593993
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI
DKAVIAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKMIAEAMDKVGKEGVITVEEG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV
AKAGKPLVIVAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGTGEEAAIQGRVAQIRQQVEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALAATRAAVEEGVVAGGGVALV
RVAAKLASLTAQNEDQNVGIKVALRAMEAPLRQIVSNAGEEPSVVANTVKAGEGNYGYNA
ATEEYGNMIDFGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKSDAPDLGAAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggtaatgacgctcgcgtaaaaatgctgcgcggcgta
aatgtactggctgatgcagtgaaggttaccctgggcccgaaaggccgtaatgtcgtgttg
gataaatccttcggtgcaccgaccattactaaagacggcgtatctgttgcgcgtgaaatc
gagctggaagacaagtttgagaacatgggcgcgcagatggtgaaagaagttgcctctaaa
gcgaatgacgcagcaggcgacggcaccacgaccgcaaccgtattggcgcaggctatcatc
actgaaggcctgaaagctgttgcagcgggcatgaacccgatggatctgaagcgcggtatc
gataaagccgttatcgccgctgttgaagagctgaaagcactgtctgtaccgtgctctgac
tctaaagctattgctcaggttggtaccatctctgctaactccgacgaaaccgtaggcaaa
atgattgctgaagcgatggacaaagtcggtaaagaaggcgtgatcaccgttgaagaaggt
accggtctgcaagacgagctggacgtggttgaaggtatgcagttcgaccgtggctacctg
tctccgtacttcatcaacaagccagaaaccggtgctgtagagctggaaagcccattcatc
ctgctggctgataaaaaaatctccaacatccgcgaaatgctgccagtactggaagccgtc
gcgaaagccggcaaaccgctggttatcgttgctgaagatgttgaaggcgaagcactggca
acgctggtggttaacaccatgcgcggcatcgtgaaagtggctgcggtgaaagcaccgggc
ttcggcgaccgtcgtaaagcgatgctgcaagatatcgcgacgctgactggcggtaccgtt
atctctgaagagatcggtctggagctggaaaaagcgacgctggaagatctgggtcaggca
aaacgcgttgtgatcaacaaagacactaccaccatcatcgatggtaccggtgaagaagct
gcgatccagggccgtgttgctcagatccgtcagcaggttgaagaagcgacgtctgattac
gaccgtgaaaaactgcaagagcgtgtggctaaactggctggcggtgtagccgttatcaaa
gttggcgcagcaactgaagttgaaatgaaagagaagaaagcacgcgttgaagatgctctg
gctgcgactcgcgccgcggtagaagaaggcgtggttgctggtggtggtgtggcgctggtt
cgcgttgccgctaaactggcttctctgactgctcagaacgaagaccagaacgtgggtatc
aaagttgcgctgcgcgcgatggaagcgccactgcgtcagatcgtttccaacgctggtgaa
gagccatctgtagttgcgaacaccgttaaagcgggcgaaggtaactacggttacaacgca
gcaacggaagaatacggcaacatgatcgacttcggtatcctggatccaaccaaagttacc
cgttctgcgctgcaatacgccgcttccgttgcgggtctgatgatcaccactgaatgtatg
gtaaccgacctgccgaaaagcgatgcgcctgacttaggtgctgctggcggtatgggcggc
atgggtggtatgggcggcatgatgtaa
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