Pectobacterium carotovorum subsp. carotovorum PC1: PC1_0584
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Entry
PC1_0584 CDS
T00934
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pct03021
]
PC1_0584
03009 Ribosome biogenesis [BR:
pct03009
]
PC1_0584
Transcription machinery [BR:
pct03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PC1_0584
Ribosome biogenesis [BR:
pct03009
]
Prokaryotic type
rRNA transcription factors
PC1_0584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
DUF4332
KH_NusA_C
FitA-like_RHH
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
ACT11639
UniProt:
C6DKK2
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All DBs
Position
679908..681437
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AA seq
509 aa
AA seq
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MNKEILAVVEAVSNEKAVPREKIFEALETALATATKKKYEQEIDVRVSIDRKTGDFDTFR
RWLVVNEVTQPTREITLEAAQFEDSSLDVGGYVEDQIESVTFDRITTQTAKQVIVQKVRE
AERAMVVDQFREQEGEIITGVVKKVNRDNISLEVRPIDGSNTSAEAVIGREDMLPRENFR
PGDRIRGVLYSVRPEARGAQLFVSRSRPEMLVELFRIEVPEIGEEVIEIKAAARDPGSRA
KIAVKTNDKRIDPVGACVGMRGARVQAVSSELGGERIDIILWDDNPAQFVINAMAPADVV
SIVVDEDTCTMDIAVESSNLAQAIGRNGQNVRLASQLLKQHRSDDRWELNVMTVEDLQAK
HQAEAHAAIDVFTKHLDIDDEFATVLVEEGFSSLEELAYVPIKELLAIEGLDEETVEALR
ERAKAALTTLALAHEESLGDGQPAEDLLSLPGLSRELAFKLAAIGVCTLEDLAEQGVDDL
TDIEGLNDEQAGELIMAARNICWFGDDNE
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagagattctggctgttgttgaagcagtttccaatgagaaagccgtcccgcgc
gagaagatttttgaagcgctggaaaccgcactggcgacagcgaccaagaaaaaatacgag
caggaaattgatgtccgcgtcagcatcgatcgcaaaacaggcgattttgataccttccgt
cgttggttagtggtgaatgaagtcactcagccaacgcgcgagattacgcttgaagccgcg
cagttcgaagattcctctcttgatgttggcggttacgttgaagatcaaattgaatccgta
acctttgaccgcattacgacgcaaacggcaaaacaggttatcgtacagaaagttcgtgaa
gccgaacgtgcgatggttgttgatcaattccgtgagcaagaaggcgagattatcaccggt
gtcgtgaagaaggtgaaccgtgataatatttcgcttgaagtcagaccaatcgatggctct
aacaccagcgcagaagcggtaatcggccgcgaagatatgctgcctcgtgagaatttccgc
cctggcgaccgtattcgtggcgtactgtattccgttcgtcctgaagctcgcggtgctcaa
ctgtttgtcagccgttcccgtccggaaatgctggttgaactcttccgcattgaagtgcca
gaaatcggtgaagaagttatcgagattaaggctgctgcccgcgatccgggttcacgtgcg
aaaattgcagtgaagacgaatgacaagcgtatcgatcccgtcggtgcttgtgttggtatg
cgtggcgcacgcgtgcaggcggtttccagcgaactgggcggtgagcgtattgacatcatt
ctgtgggatgacaaccctgcacagtttgtgatcaatgccatggcacctgccgatgtggta
tcgatcgtggttgatgaagatacctgcacgatggatatcgccgttgagtcgagcaatctg
gctcaagcgattggtcgtaacgggcaaaacgtacgtttggcttctcaactgctgaaacag
catcgttcagacgaccgttgggaactgaacgtgatgacagtggaagatcttcaggccaag
catcaagctgaagcacatgctgcaatcgacgtctttaccaagcaccttgatattgatgac
gagtttgccactgtgttggttgaagaaggtttctcttcacttgaagaactggcctacgtg
ccaatcaaggaactgctggctattgaaggccttgatgaagaaaccgttgaagcattgcgt
gagcgtgctaaagccgcattaacaacgctggcactggcgcatgaagaaagccttggtgac
ggtcaacctgctgaagacttgcttagcttgcctgggctgtcgcgtgagttggcgttcaag
cttgctgcgatcggtgtttgtacgctggaagatcttgctgaacagggcgttgacgacctg
acagatattgaagggctcaatgatgagcaagcgggcgaattgattatggccgcacgtaat
atctgttggtttggcgacgacaacgaataa
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