Pectobacterium carotovorum subsp. carotovorum PC1: PC1_0587
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Entry
PC1_0587 CDS
T00934
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pct03016
]
PC1_0587
Enzymes [BR:
pct01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PC1_0587
Transfer RNA biogenesis [BR:
pct03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PC1_0587
Prokaryotic type
PC1_0587
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ACT11642
UniProt:
C6DKK5
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All DBs
Position
684635..685579
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDVHGVLLLDKPQGVSSNDVLQKVKRIFNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGNVIEERAIGFSATELEQALEGFRGTTQ
QVPSMYSALKYQGRKLYEYARQGLTVPREAREITVYELQFIRWEGDELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLQVATYPIERMVTLEQLATLVEQAQAQELSPSLSLDPL
LMPMESPVIDFPEVNLTPVVAGYLKLGQPVQAANTPLNGMVRITEGDAHTFIGMGEIDGD
GRVAPRRLVVEYPV
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgccgtggccgtgatgtacacggcgtattgctattagataagccg
cagggcgtgtcgtctaatgatgttttacagaaggtaaaacggatttttaacgctaacaga
gcgggccacacgggggcattggatccattagccaccggcatgttgccgatttgccttggg
gaagcgacgaaattttcccaatacctgctggattcagataaacgctaccgtgttattgct
cgtcttgggcaacgcaccgacacctctgatgccgatggcaacgtgattgaagaacgggcg
attggtttttctgctacggaactggagcaggcgctggagggctttcgtggtaccacgcag
caagtgccatccatgtactcagcgctgaaataccaggggcgtaagctgtatgagtatgct
cgtcaggggctgacggttccgcgtgaagcacgtgaaatcaccgtgtacgaactgcagttc
attcgctgggaaggcgatgagctggagttagagatccattgctctaaagggacatacatc
cgtaccattattgatgatttgggcgaaaagctgggctgtggcgcgcatgtgatttacctg
cgtcgtttgcaggtggctacgtatcctatcgaaagaatggtaacgctggagcagttggcc
acgttggtcgagcaggctcaggcacaagagctttcgccttcgctgagtctcgatccgctg
cttatgccgatggaaagcccggttattgattttcctgaagtgaatttgacgcccgttgtc
gccggttatttgaagctggggcagcccgttcaggccgcgaatacgccgttgaacggtatg
gtgagaatcaccgaaggcgacgcgcatacgtttatcggtatgggtgaaatcgacggcgat
ggccgcgttgcgccacggcgtctggttgttgagtatccggtgtaa
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