Pectobacterium carotovorum subsp. carotovorum PC1: PC1_0682
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Entry
PC1_0682 CDS
T00934
Name
(GenBank) Rhamnogalacturonate lyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PC1_0682
Enzymes [BR:
pct01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
PC1_0682
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GFIT
Motif
Pfam:
CBM-like
fn3_3
Rhamnogal_lyase
CarboxypepD_reg
RhgB_N
CarbopepD_reg_2
NOMO1-like_2nd
EMC7_beta-sandw
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
ACT11737
UniProt:
C6D929
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All DBs
Position
799196..800926
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AA seq
576 aa
AA seq
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MKRSVLLLVGAMLAPYSYSAQDNAVSLSVSGLNTVLDNGLLSVAFGEDGSAVRMVTGGKN
IVTNLSGAARDPSKTRSAYLDYYINDVHAKGVKDFVPERVEVLRNDREMAHVAYIDERDG
LLRLEYHLIMRRGVSGLYSYVVAENRGSQDVKVSELRNVYRFDPARLDHLYNGDRQGKPL
LYSQLEASPKVQDETWRLPDGSIYSKYDFAGYMRAAPFWGVFGNGVGAWLIHGNREYFSG
DALKQDLLVHQDAIILNYMTGSHFGTPDMVAPPGWKKFYGPWLLYINQGDTEQMLADVRR
QALTETVSWPYQWVDDSRYVRDRTQVSGRVASQQPMTVVLSSSLDEPFDVQTRGYSYQAT
TDTEGNFAISHVRPGNYHLAVYANSGTQPGILAEQTLSVSGDKQALPVIALPKAEPVIWA
IGQANRQASEFRFGDEARNTLWQHEVPANLTFDIGRSDYQRDWYYAQTKPGKWDICFALQ
PEKKTYFLNIALAAASNSGMSEPTLPQLAVAVNGRTLETLTYENDKTIYRGALQSGRYHL
ARIPVSSHLLKNGNNTITLQLKGGSVMYDVVTLSEE
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcgatctgtcttgttgttggtgggggccatgctggcgccctatagctatagcgcg
caggataatgcggtgtcgttatccgtttctggtttgaataccgtgctggataacggctta
ctcagcgtcgcatttggcgaggacggcagcgcggtgcgtatggtgacgggaggcaaaaat
atcgtcacgaatttgtccggcgcggcgcgcgatccgagcaaaactcgtagcgcttacctc
gattattatattaacgatgttcatgctaaaggcgtcaaagattttgtccccgagcgggta
gaggtgttgcgcaacgatcgtgagatggcgcatgtcgcctatatcgacgagcgggacggg
ctgttacggcttgaatatcacctgattatgcgtcgcggcgttagcggactttacagctat
gtagtggcggagaatcgcggcagtcaggacgttaaagtcagtgaattacgtaacgtatac
cgcttcgatcctgcccggttagaccatctctataacggcgatcgtcagggtaaaccgctg
ctctacagccagcttgaagcctcgccgaaggtacaagatgaaacctggcggttgccggat
ggcagtatctattccaaatatgattttgctggctatatgcgtgctgcgcctttttggggt
gtttttggtaatggcgtcggggcgtggttgattcacggcaatcgggagtatttctccggt
gatgcgctcaagcaggatttactggtgcatcaggatgcgatcattttgaactacatgacg
ggttcacacttcggtacgccagatatggtagcgcctccgggctggaaaaaattctacggc
ccgtggctgctgtatatcaatcagggcgataccgagcagatgctggcagatgtccggcgt
caggcgctgacggaaactgtcagttggccataccaatgggtggatgattcccgctatgtg
cgcgatcgcacccaggtgagtggacgcgttgccagccagcaaccgatgacggtggtgctt
tcatcatcattggatgaaccgtttgatgtacaaacccgcggttattcgtatcaggcaacg
acagacactgaggggaattttgcgatttcccatgtccgtccgggcaattaccaccttgcg
gtctacgccaatagcggtacgcagccgggaatattggcagaacaaacgctgtctgtttct
ggtgataaacaagccctgccggtgattgctctgcctaaagccgaacccgttatctgggcg
attggacaagcaaatcggcaggcgagtgaattccgctttggcgacgaggcacgcaacacc
ctctggcaacatgaggtgcctgccaatctgacgttcgatattggccgcagcgactatcaa
cgcgactggtattacgcgcagaccaaaccgggaaaatgggatatctgttttgccctgcaa
cctgagaagaaaacctatttcctgaatatcgcattggcggcagccagcaatagcggcatg
agtgaaccgaccctgccacagctggcggtagcggtaaatggcaggacgctggaaacgctg
acttacgaaaatgacaaaaccatttatcgcggtgcgctacaaagcggtcgttatcaccta
gctcgcatccctgtgtcatcccacttgctgaaaaacggcaacaacacaatcacactgcaa
ttaaaaggcggcagcgtgatgtacgacgtggtgaccttaagcgaggagtaa
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