Pectobacterium carotovorum subsp. carotovorum PC1: PC1_0785
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Entry
PC1_0785 CDS
T00934
Name
(GenBank) transcriptional regulator, NifA subfamily, Fis Family
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pct03000
]
PC1_0785
Transcription factors [BR:
pct03000
]
Prokaryotic type
Helix-turn-helix
Other families
PC1_0785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
GAF_2
AAA_5
Mg_chelatase
AAA
HTH_8
MCM
AAA_2
AAA_16
GAF_3
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ACT11839
UniProt:
C6D9Q3
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All DBs
Position
918092..919684
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AA seq
530 aa
AA seq
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MTLINYCLNDTDLSLGHAMTLSINALARIAIELQMGLSNQDRFQRLINSLRQLLRCDASA
LLRYENQLFRPLAIDGLAPDVLGRRFRLSDHPRLEAIARAGDVVRFPADSQLPDPYDGLI
PSQEDLKVHACVGLPLFANQNLIGALTVDGMDPCQFDHFSDEELRLVGAMAAAALSNALL
MERLERQLPAPVRAESPAAESVEEMVGLSEPMLRLKKEVDIVAGSDLNVLIMGETGVGKE
LVARAIHRGSSRAIHPLVYLNCAALPESVAESELFGHVKGAFTGAIHHRTGKFEMADNGT
LFLDEIGELSLTLQAKLLRVLQYGDLQRVGDDSSLKVNVRVLAATNRDLRQAVLDGAFRA
DLFHRLSVFPLSVPPLRERSQDVALLAGFFCERSRVQLGLARLALTADAGALLEQYDWPG
NVRELEHAIYRATVLARAGQESGEVLLGPEHFNLELYSQPVHTPAGAPSATDSVPDYFIS
GGLREATDDYQRRIIQHTLARHEGNWSSCARELEIDSGNLHRLAKRLGIK
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgacattgattaactattgtcttaatgacacagatttgtcattaggacacgccatgacg
ctctccatcaatgcccttgcccgcatcgctatcgagctgcaaatggggctatcgaatcag
gatcgttttcagcgcttgattaacagcctgcgccagctgctgcgctgtgatgcctcggcg
ctgttacgctacgaaaatcagctgtttcgcccgctggcgatcgacggtctggcgccggac
gtgttggggcgacgctttcgtctgtccgatcatccccgtctggaggccattgcccgtgcg
ggtgacgtggtacgctttccggcggacagccagcttcccgatccgtatgacggcctgatc
cccagtcaggaggatcttaaggtgcacgcctgcgtcggcctgccgctgtttgccaatcag
aacctgatcggggcgctgaccgtggacggtatggatccctgccagttcgaccattttagt
gacgaagaactgcggctggtgggggcgatggcggcggcagcgctgagtaacgcgctgctg
atggaacgccttgagcggcagttgcctgcgccagtgcgtgccgaaagtcctgcggcggaa
agcgtggaggaaatggtggggctgtcggagccgatgttgcggctaaagaaagaggtcgat
atcgtcgcgggctccgatctgaacgtgctgattatgggagaaactggcgttggtaaagag
ctggtggcgcgcgcgattcatcgtggttccagccgggcaattcatcctctggtgtacctg
aactgtgccgcgctgccggaatcggtcgcagagagtgaactgtttggccatgtgaagggc
gcatttactggtgcaatccatcaccgcactggcaagtttgaaatggcggataacggcacg
ctatttctggatgagattggcgaactgtcgctgacgctacaggctaagctgctgcgcgta
ttgcagtatggcgatctccagcgcgtgggggatgacagcagcctgaaagtgaacgtacgc
gtgctcgcagcgactaaccgcgatctgcggcaggcggtgctggatggtgctttccgtgcc
gatttgttccaccgtttgagcgtgtttccgctatctgtaccgccgctacgtgagcgtagt
caggatgtggcgctgttggccgggttcttctgtgagcgtagccgcgtgcaactggggctg
gcgcgactggcgttgacggcagacgcgggcgcgctgttggaacaatacgactggccgggg
aatgtgcgcgagctggaacacgctatttatcgtgccaccgtgttggcgagagcagggcag
gaatcgggtgaggtgctgttaggccctgaacatttcaatcttgaactttactcccagcct
gttcatacccccgcaggagccccgagtgctaccgacagcgtaccggattatttcatcagc
ggcggcttgcgagaggcaacggacgactatcagcgtcggatcatccaacacacgctggcg
cgtcatgagggcaactggtcatcctgcgcgagagaactggaaatagacagcggcaaccta
caccgtctggcgaagcggctgggtatcaaataa
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