Pectobacterium carotovorum subsp. carotovorum PC1: PC1_0872
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Entry
PC1_0872 CDS
T00934
Name
(GenBank) Ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct00330
Arginine and proline metabolism
pct00480
Glutathione metabolism
pct01100
Metabolic pathways
pct01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
PC1_0872
09106 Metabolism of other amino acids
00480 Glutathione metabolism
PC1_0872
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
PC1_0872
Enzymes [BR:
pct01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
PC1_0872
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Gene cluster
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Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ACT11922
UniProt:
C6DAB4
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Position
1013944..1016097
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AA seq
717 aa
AA seq
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MKQLKIAANAAVATRLITTREIVALSQTDFTDVAAVVVSIEEARSGILSILQHTGFSIPA
FVEEPDEDKELDVLPAGSEWLVLDDDGEHANVLERAAKAYQDTLLPPFFDTLTKYVNMKN
TTFACPGHQGGQFFRKHPAGRQFFEFYGENVFRSDICNADVKLGDLLIHEGAAKKAQKHA
ARVFNADKTYFVLNGTSSANKVVTNALLARGDLVLFDRNNHKSNHHGALIQAGATPVYLE
TVRNPFGFIGGVDAHCFDEAYLRKLIAEVAPERANEPRPFRLAVIQLGTYDGTIYNARQV
VDSIGHLCDYILFDSAWVGYEQFIPMMEQCSPLLLDLNENDPGIFVTQSVHKQQAGFSQT
SQIHKKDTHIKGQRRFCNHKQLNNAFMLHASTSPFYPLFAALDINAKMHEGASGRRMWMD
CVKLGIEARKQLLTRCSLIKPFVPVTVGGALWQDLDTETIAQDVRFFNFEPGEKWHAFEG
YAEDQYFIDPCKLLLTTPGIDAISGDYTEFGIPATILANYLREHGIIPEKCDMNSILFLL
TPAEDAAKMQELVNALVHFETLIARDAPLSEVLPSLYQKYKERYRGYRLRRLCQEMHDFY
AQHNVKDLQKAMFRKTEFPSVVMLPQDANREFVRGNIELVPIAEAEGRIAAEGALPYPPG
VLCVVPGETWGGAVQRYFLALEAGINLLPGFSPELQGVYSVAEEDGSKRLYGYVVEQ
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagttaaaaattgcggcgaatgcagcggttgccacccgtttaatcacaacgcgc
gagattgtcgcgttgagtcagaccgacttcacggatgtggcggcggtcgtggtttctatt
gaggaagcccgtagcggcattctgtcgatattgcagcacactggctttagtatcccggcg
tttgtcgaagagcctgacgaagataaagagctggatgttctgcctgcgggcagcgaatgg
ctggttcttgatgacgacggcgagcacgctaacgtgctggagcgagcggcgaaagcctat
caggataccctgttgccaccgtttttcgatacgctgaccaaatacgtcaacatgaaaaac
acgacgtttgcctgtccggggcatcagggcggccagttcttccgcaagcacccggcgggg
cgtcagttttttgagttttacggtgagaacgtgtttcgttcggacatctgtaacgctgac
gtcaagctaggtgatttgttgattcacgaaggggcggcgaagaaggcgcagaagcatgct
gcgcgtgtgtttaacgcggataaaacctatttcgtgttgaacggcacgtcctctgcgaac
aaagtggtgacgaacgcgctgctggcgcgtggcgatctggtgctgtttgaccgcaacaac
cataaatccaaccatcacggcgcgctgattcaggcgggcgcgacgccagtctatctggaa
accgtgcgcaacccgttcggttttatcggcggtgtggatgcgcattgttttgatgaagcc
tatctgcgcaagctgatcgcggaagtcgcaccggaacgcgccaacgagccgcgtccgttc
cgtctggccgtcatccagctcggcacctatgacggcaccatttataacgcgcgtcaggtt
gtcgatagcatcgggcacctgtgcgactacattctgtttgactccgcctgggtcggctat
gagcagtttatcccgatgatggagcagtgctcgccgctgttgctggatctgaatgagaac
gatccgggcatctttgtcactcagtcggtgcataagcagcaggcgggcttctcccagacc
tcgcagatccacaagaaagatacgcacatcaaaggccagcgccgtttctgcaaccataaa
cagctgaataacgcctttatgctgcatgcctcaaccagtccgttttatccgctgtttgcg
gcattggatatcaacgccaaaatgcacgaaggggcaagcgggcgtcggatgtggatggac
tgcgtgaagttgggcattgaggcgcgtaagcagctgctgacgcgctgttcgctcatcaaa
ccgttcgtgcctgtgacggtgggcggcgcgctctggcaggatctcgatacggagacgatc
gcgcaggacgtgcgtttcttcaactttgagccgggcgagaaatggcatgcgttcgaaggg
tacgccgaggatcagtactttatcgatccctgcaaattactgctgaccacgccgggtatt
gatgcgattagcggcgattataccgaatttggtattccggcgacgatcctggctaactac
ctgcgtgagcacggcattatcccggaaaaatgcgacatgaactcgatcctgttcctgcta
acgccagcggaagacgctgcaaaaatgcaggaactggtgaatgcgctggtgcacttcgaa
acgctgattgcccgcgatgcgccgttgagtgaagtgctgcctagcctgtatcagaaatac
aaagagcgctaccgcggttatcggctgcgccggctgtgtcaggaaatgcatgacttttac
gctcagcacaacgtgaaagatctgcaaaaagcgatgttccgcaaaaccgagtttccgtcc
gtggtgatgttgccgcaggatgctaacagagagtttgtgcgcgggaatatcgaactggtt
cccattgctgaagcagaagggcgtatcgcggcagaaggcgcattgccatatccgccgggc
gtgctgtgcgtcgtgccgggggaaacctggggcggggcggtacagcgctattttctggcg
ttggaagcgggcattaacctgctgccgggcttctccccggaattgcagggcgtctatagc
gtcgcggaagaagatggcagcaaacgtctgtatggttacgtagtagaacagtaa
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