Pectobacterium carotovorum subsp. carotovorum PC1: PC1_0989
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Entry
PC1_0989 CDS
T00934
Name
(GenBank) glycoside hydrolase family 28
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct00040
Pentose and glucuronate interconversions
pct01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PC1_0989
Enzymes [BR:
pct01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
PC1_0989
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Gene cluster
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Motif
Pfam:
Glyco_hydro_28
Cytomega_UL20A
Motif
Other DBs
NCBI-ProteinID:
ACT12039
UniProt:
C6DAZ7
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Position
1138548..1139756
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AA seq
402 aa
AA seq
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MEYQSGKRVLSLSLGLIGLFSASAFASDSRTVSEPKAPSSCTVLKADSSTATSAIQKALN
NCGQGKAVRLSAGSSSVFVSGPLSLPSGVSLLIDSGVTLRALNNAKSFENAASSCGVVDN
NGKGCNAFITATSTTNSGIYGPGIIDGQGGVKLQDKKVSWWDLAADAKVKKLKQNTPRLI
QINKSKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITI
AHSNISTGDDNVAIKAYKGRAETRNISILHNEFGTGHGMSIGSETMGVYNVTVDDLNMNG
TTNGLRIKSDKSAAGVVNGIRYSNVVMKNVAKPIVIDTVYEKKEGSNVPDWSDITFKDIT
SQTKGVVVLNGENAKKPIEVTMKNVKLTSDSTWQIKNVTVKK
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggaatatcaatcaggtaagcgagttttatcactatcactgggtcttatcggcctgttc
agcgcatcggcatttgcttctgactcacgaacggtgagcgagccgaaagcaccgtcctcc
tgtacggtactgaaagcggacagcagcacggccaccagcgccattcaaaaagcgttgaat
aactgcggacaaggcaaagcggtcaggctgagcgcggggagttcctccgtctttgtgagt
ggtccactttctctgccttcgggcgtcagcttattaatcgatagcggggtgacgctacga
gctctgaataacgccaagtcttttgagaatgcggcgtcatcctgtggcgtagtggataac
aacggtaaaggttgtaatgcatttattaccgctacgagtacgacgaacagcggaatctat
gggccgggcatcattgatgggcaagggggcgtgaagcttcaggataaaaaggtgagctgg
tgggatctggctgctgacgccaaagtgaaaaagctaaaacagaataccccgcggctgatt
cagattaataagagtaagaatttcacactgtataacgtctctctcattaactcccctaac
ttccacgtcgtgttcagcgatggtgatggtttcaccgcgtggaaaaccacgatcaaaacc
ccttccaccgcgagaaacaccgacggtatcgatccgatgtcatcaaaaaacatcacgatt
gcccacagcaatatttcgacgggtgacgataacgtggcgatcaaagcctataaaggccgt
gccgagacacgcaacatttccattttgcataatgaattcggaacgggtcacggtatgtcg
atcggcagcgaaacgatgggggtttacaatgtcaccgtcgatgatctgaacatgaatggc
accacgaatggcttgcgcattaagagtgacaaatcggctgccggggtggtcaacggcatt
cggtatagcaatgtggttatgaagaatgtggcgaagccgattgtgattgatacggtatat
gagaagaaagagggaagtaatgtgcctgactggagcgacattacgtttaaagatattacc
tcccaaaccaaaggtgtggttgtgctgaacggcgaaaacgcgaaaaagccgatcgaagtg
acgatgaagaacgtcaaactgacgagcgacagcacatggcagatcaagaacgtcaccgtt
aagaagtaa
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