Pectobacterium carotovorum subsp. carotovorum PC1: PC1_1004
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Entry
PC1_1004 CDS
T00934
Name
(GenBank) putative exonuclease RdgC
KO
K03554
recombination associated protein RdgC
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pct03400
]
PC1_1004
DNA repair and recombination proteins [BR:
pct03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PC1_1004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RdgC
Motif
Other DBs
NCBI-ProteinID:
ACT12053
UniProt:
C6DB11
LinkDB
All DBs
Position
complement(1171377..1172306)
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AA seq
309 aa
AA seq
DB search
MLWFKNLMIYRLSRDSALSKDNVLSADELEKRLSAFAFTPCGSQDMMKTGWVSPMGSHSD
ALTHVVNGQIVICVRKEEKILPSPVIKQTLQAKIERLEAEQHRKLKKTEKDSLKDEVLHS
LLPRAFSRFSQVWMWIDTVNGLIMVDAASAKKAEDTLALLRKTLGSLPVVPLTMENPIEL
TLTEWVRSGEPAAGFVLQDEAELKAILEDGGVIRCKKQDLVCDEIAVHIEAGKLVTKLAL
DWQERIQLVLSEDGSVKRLKFSDTLREQNDDIDREDFAQRFDADFILMTSELAALIANLI
EALGGEAQR
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgttgtggtttaaaaacttaatgatttaccgcctaagccgggatagtgcactgtctaaa
gataacgttttatctgcagatgagctggaaaaacggctcagcgctttcgcgttcaccccg
tgcggcagtcaggatatgatgaaaacgggttgggtatcaccgatgggatcgcatagcgat
gcattaacgcatgtcgttaatgggcaaatcgttatctgcgtccgtaaagaagaaaaaatc
ctgccttctccggtcatcaagcaaacccttcaggccaaaatcgaacgtctggaagcggaa
cagcatcgcaagctgaaaaaaaccgaaaaagattcgctgaaagatgaagtgctgcatagc
ctgctgccgcgtgcgttcagccgtttcagtcaggtctggatgtggatcgacacggttaac
ggcctgattatggtcgatgccgccagtgctaaaaaagcggaagatacgctggcgctgctg
cgcaaaacgctggggtcactgcctgttgtgccactgacgatggaaaatcctattgagctg
acgctgaccgagtgggtacgctccggtgaaccggcagcaggttttgtgctacaggatgaa
gcagagctaaaagcgattctggaagacggcggcgttatccgctgtaaaaaacaggatttg
gtctgcgatgaaatcgccgtccatattgaagcaggcaagctggtcaccaagctggcgctg
gactggcaggaacgtattcagttggtcttgtccgaggacggttcggtaaaacgcttgaag
ttctccgatacgctgcgggaacaaaacgacgatatcgatcgggaagattttgcgcagcgg
tttgatgccgatttcattttgatgaccagtgaactggctgcattgattgcgaatctgatt
gaagcgttgggcggagaagcccaacgttaa
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