Pectobacterium carotovorum subsp. carotovorum PC1: PC1_1006
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Entry
PC1_1006 CDS
T00934
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pct03400
]
PC1_1006
DNA repair and recombination proteins [BR:
pct03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PC1_1006
Archaeal homologous recombinant proteins
PC1_1006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
ABC_tran
cobW
nSTAND_NTPase5
AAA_21
nSTAND3
SMC_N
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACT12055
UniProt:
C6DB13
LinkDB
All DBs
Position
complement(1173525..1177208)
Genome browser
AA seq
1227 aa
AA seq
DB search
MKILSLRLKNLNALKGEWKIDFTQEPFSSNGLFAITGPTGAGKTTLLDAICLALYHETPR
LGQLSEKHNDLMTHNTSECLAEVEFEVKGVGYRAFWSQRRARNSPDGNLQTPKAELALIE
GGRILCEKITDKKNRVEQITGLDFGRFTRSMMLSQGQFAAFLNAQPKDRADLLEELTGTD
IYGLISERVYDKHRQALEALNMLQTRASSIQLLTDEQRQQVEVQLAERIQQEQQGNVERE
QALTTLRWFEQLTQQQTSVTHTQAQHTSAESAIQQARPQLDKLANSEPAEKLRPLHQEKE
RYRQASLTLAQQIEQLNGKLAAEQLALRTLHQQEEKAEQDVSEHKQIRQQQEQLINEQVV
PLDHRIATLEQQKNQQQNELAKTQARLHADDAKQTLVAAEQQQAKRQLEQIQSYRQQHAH
HQQWGELLPLWRTQFRQLRQLQDEHQKLNQKQAQHTAESTARQQEADKLAAQQREQQKVV
DAVRQQFTQHDETRQHQDTHQPLSTLHQRFNQLMDQQATCRQLATVSDQYQRLQVRKQQH
LAKLAEAQGHIDQSEILQKQQQSEHQQRSERLADLETIYRQEVHIVKLEAERQRLQAGEA
CPLCGSTEHPAIERYQALQPSETQRRLTALQQDVNQLTIALANTTAELNARLQQREQLQS
ELAQCDSEHQALLQHWQSVSERLQVTYSLEQQDEIAVWLTLREAEEQAIRQQIAAREQSQ
KLWQESKDLLTAAEALLRDLEQKIALNAQQQTSLDVTQEETTQSLQNAHQQITQQTQDIT
QTLATVGLLLPDTDTQDGWLAQRDSEWQNWKAKEQEQSRLTPLLATLESDLQHLRHSVSE
ATQHIQTQQQQLAQHLAQLNTSQQERKVLFGDKQITDVREQLQRTSQQRDDALRLAQSAR
QQTETALSRLTGELASTQQQYEQSTCQHESATERFTLALQQSTFVDETAFLHALLDEQER
QTLQEFKETLHQRLQQAATLRQQAEQALLEHQQKRPASLTEDATQEAIQQQLAALDDTLK
TNLRQQGEFQRQLSDDKQQRQNQQNLLNEIAQSQQKNDDWETLNSLIGSSKGDKFRKFAQ
GLTLDHLVYLANLQLSRLHDRYQLKRKPGGDLELLVMDTWQADAERDTKTLSGGESFLVS
LSLALALSDLVSHKASIDSLFLDEGFGTLDAETLDIALDALDNLNASGKTIGVISHVEAM
KERIPVQIKVQKVNGLGVSRLAPQYAV
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcagtctgcgcttaaagaacctcaacgcgctgaaaggcgaatggaagatc
gacttcacgcaggagcccttttccagcaacggcttatttgcgattaccggccccaccggc
gcgggaaaaaccacgctgctggatgccatatgtctggcgctttaccacgaaacaccgcga
ttgggtcagctttctgaaaagcataatgacctgatgacgcacaacacctccgaatgtctt
gcagaagttgaattcgaagtgaaaggcgtcggataccgcgccttctggagccaacgtcgg
gctaggaactcaccggatggtaatttacagacaccaaaggccgaactcgccctcattgaa
ggcggtagaattctgtgtgaaaaaatcaccgataaaaaaaatagagtagaacaaatcacc
ggactggattttggccgttttacacgatccatgatgttgtcgcaggggcaatttgctgcg
tttctcaacgcacaacccaaagacagagcggacctactggaagagctgaccggcacagat
atttacggactgatctccgaacgcgtctatgacaagcacaggcaggcgctcgaagcactg
aacatgctacagacgcgtgcatccagcattcagctgttgaccgatgagcagcgtcagcag
gtggaagtacagcttgccgaacggatccagcaggaacaacagggcaacgttgagcgtgag
caagcactgactacgctacgctggtttgagcaactgacgcagcagcaaacgtcggtaact
catacgcaggcgcaacacacgagcgccgaatccgccattcagcaggccaggccgcagctc
gataaattagccaatagcgaaccggcagaaaaactgaggccgctacatcaggaaaaagag
cgctatcggcaggcgtccctgaccctcgcccagcagattgaacaactcaacggcaagctg
gccgcagaacagctggcgttaagaacgttacatcagcaagaagaaaaagcggaacaggac
gttagtgagcacaagcagatacgacaacagcaagagcaactgatcaacgagcaggttgta
ccacttgaccatcgcattgctactctggaacagcaaaaaaaccagcagcagaacgaactg
gcaaaaacgcaggctcgcctgcacgccgacgacgctaaacaaacactggtcgcagcggaa
caacagcaggctaaacggcagcttgaacagatccagtcttaccgccagcaacacgcacat
catcagcagtggggagagctgttgcctctgtggcgcacccagtttcggcagttgcgccag
ttacaggacgagcaccagaagctgaaccagaaacaggcacagcatacggcagagtcgacg
gcacggcagcaagaagccgacaagctggcggcacagcagcgtgaacaacaaaaagtcgtt
gatgctgtacgccagcagttcacgcaacacgatgaaacgcggcaacatcaggacacgcat
cagccactttccactctgcaccagcgctttaatcagctcatggatcagcaggcgacatgt
cgacaactcgccaccgtcagcgaccaataccagcgccttcaggtgcgcaagcagcaacat
ctcgccaaactcgctgaggcacaaggccatatcgaccagtcagaaatattgcagaaacag
cagcagtctgaacatcagcaacgcagcgagcgtctggccgatttggaaacgatatatcgg
caggaagtgcatatcgttaagctggaagccgaacggcaacggctacaggccggagaggcg
tgcccgctgtgtggctcaaccgagcaccccgctatcgagcgctatcaggcactacaaccg
tctgaaacccaacggcgtctgacggcgttacagcaggatgtaaaccagttaaccatcgcg
ctggcgaataccactgctgaactgaacgcacgcttacagcagcgggaacagctgcaatcg
gaacttgctcaatgtgatagcgaacatcaggctctgctgcaacactggcaaagtgtcagt
gagcgcttacaagttacctactcgctggaacagcaggacgagatagccgtctggcttaca
ctgcgtgaagccgaagaacaggccattcgacagcagattgccgcgcgcgagcagtcgcaa
aaactgtggcaggaaagtaaggatttactgactgccgcagaagcattattacgggatctc
gaacagaaaatcgcgctgaatgcccagcaacaaacttcgctagacgttacgcaggaagaa
acgacgcagtcgctgcaaaacgcacaccaacagatcacgcaacagactcaggacatcacg
caaacgctggcaacggtggggcttcttttgccagacactgacacacaggatggctggctg
gctcagcgtgacagcgaatggcaaaactggaaagccaaagagcaggagcagtctcgctta
acccctctgttagccacgctggaaagcgatcttcaacatctgcgtcacagcgtaagcgag
gcaacacagcacatccaaacgcagcaacagcagttggcacagcacctcgcgcagctcaac
acaagccaacaagagcgaaaggtgctatttggggacaagcaaatcaccgatgtgcgcgaa
cagctacaacgaaccagccagcagcgtgatgatgcactcaggctcgcgcaatcagcccgt
cagcaaaccgaaacggcgttaagccgtctgacgggagagctggctagcacgcagcagcaa
tatgaacagagcacgtgccagcatgagagtgcaacagaacgctttactctggcgttgcag
caaagcactttcgttgatgaaaccgcctttctccatgcactgcttgatgagcaggaacgt
caaacgttgcaggaattcaaggaaacgctgcatcagcgcttgcagcaagcggcgacactg
cgccagcaggctgaacaggcgctacttgaacatcaacaaaaacggccagcatccctgacg
gaagacgctacgcaagaggcgatacagcagcagttggccgcgctggatgacacgctgaaa
actaacttgcggcagcagggggaattccagcgtcagttatctgacgacaaacaacagcgc
cagaaccagcagaatttacttaatgagattgcccaaagccagcaaaagaatgacgactgg
gagacgttaaactcgctgatcggctccagtaaaggggataaattccgcaaatttgctcag
gggctgaccttggatcatctggtctatctcgccaatctccagctttcacgcctgcacgat
cgctatcagctcaaacgtaagcccggtggcgatctggaacttctggtgatggatacctgg
caggcggacgccgagcgcgacacaaaaacgctatccggcggcgaaagttttctggtcagt
ctgtcattggcgctggcgctgtccgacctggtcagccataaagccagtatcgactcgctg
tttctggatgaaggctttggcacgctggatgccgagacgctggatatcgcactggatgcg
ctggataacctgaacgcctcgggtaaaaccatcggcgtcattagccatgttgaagccatg
aaagagcggattccggtacagatcaaagtgcagaaggttaacgggctcggcgtcagcagg
ctggcgccgcagtacgccgtttag
DBGET
integrated database retrieval system
