KEGG   Pectobacterium carotovorum subsp. carotovorum PC1: PC1_1025
Entry
PC1_1025          CDS       T00934                                 
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pct  Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct00740  Riboflavin metabolism
pct01100  Metabolic pathways
pct01110  Biosynthesis of secondary metabolites
pct01240  Biosynthesis of cofactors
pct02024  Quorum sensing
Module
pct_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:pct00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    PC1_1025
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PC1_1025
Enzymes [BR:pct01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     PC1_1025
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     PC1_1025
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: ACT12074
UniProt: C6DB32
LinkDB
Position
1196772..1197908
AA seq 378 aa
MSVFQENGHLPQDELYMARALELARRGRFTTAPNPNVGCVIVRDGDIVGEGYHFRAGEPH
AEVHALRMAGERARGATAYVTLEPCSHHGRTPPCADALVAAGVSRVVAAMQDPNPQVAGR
GLHRLQQAGIAVSHGFMMAEAEKVNVGFLKRMRTGFPYVQLKMAASLDGRTAMASGESQW
ITSPQARQDVQRFRAESAAILSSSATVLADDPSLTVRWSELGADVQTRYSEADLRQPVRV
IVDSQRRVTPQHRIVSQPGETWLARVQADEQAWPQGVEQVTLPQHNGGVDLVALMMVLGR
RQINSVWVEAGASLAGALLNAGVVDELIVYLAPKLLGENARSLCLLPGLDQLSQAPEFDI
AEVRQIGPDLRLRLKPKF
NT seq 1137 nt   +upstreamnt  +downstreamnt
atgagcgtttttcaagaaaacggccacttgccgcaggatgaattatacatggcgcgtgcg
ttagagttggcgcgtcgtggccgttttacgacggcacccaaccccaatgttggctgcgtg
atcgtgcgcgatggcgacattgtcggtgaaggctatcatttccgcgcaggcgaacctcat
gctgaggttcatgcgttgagaatggcaggggagcgcgcacgtggtgcgacggcctatgtc
acgctggagccgtgcagccatcatggccgaacgccgccttgtgctgatgcgttggttgct
gctggtgtctcccgtgtagttgccgcgatgcaggatcccaatccgcaggtcgcgggtcgt
ggcttacatcgtttgcagcaggcagggatcgctgtcagccatggtttcatgatggctgaa
gcagagaaagtcaatgtaggtttcctgaagcgcatgcggacaggctttccttacgtgcag
ctcaaaatggcggcatctttggatgggcgtactgcgatggcctcgggagaaagtcagtgg
attacctcaccgcaggcgcgtcaggatgtgcagcgttttcgtgcggagagcgcagcgatt
ttgagcagtagtgcgacggtgctggctgacgatccttctcttacggtgcggtggtcagag
ctgggtgccgatgtgcagactcgttattcagaggcggatctcaggcagcccgtacgagtg
attgtggacagccagcgtcgtgtcacaccgcagcatcggattgttagccaaccgggtgag
acttggttggcgcgggtgcaggcagacgaacaggcgtggccacagggcgttgagcaggtc
accttaccgcagcacaatggcggcgttgatctggtagcgctgatgatggtgctggggaga
cggcagattaactctgtctgggttgaagccggagccagtctggctggtgcgctgcttaat
gcgggtgtcgttgatgaacttatcgtttatcttgcgccaaaactgctgggtgaaaacgcc
cgttcgctgtgcctcttgccagggctggatcaactgtctcaggcaccggaatttgacatc
gcagaggttcggcagattggtccggatttgcgattacgcctgaaacctaaattctga

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