Pectobacterium carotovorum subsp. carotovorum PC1: PC1_1031
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Entry
PC1_1031 CDS
T00934
Name
(GenBank) Polyprenyl synthetase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
pct
Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct00900
Terpenoid backbone biosynthesis
pct01100
Metabolic pathways
pct01110
Biosynthesis of secondary metabolites
Module
pct_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
pct00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
PC1_1031
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pct01006
]
PC1_1031
Enzymes [BR:
pct01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
PC1_1031
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
PC1_1031
Prenyltransferases [BR:
pct01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
PC1_1031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
ACT12080
UniProt:
C6DB38
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All DBs
Position
complement(1202468..1203379)
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AA seq
303 aa
AA seq
DB search
MTDFSTQLSAHYQRTNRMLGHFIATLPFQSSPLVNAMEYGSLLGGKRLRPFLVYTTGELF
GMPLESLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDALQT
LAFSILADAPMPQVSDRDRLAMISELAQASGVAGMCGGQAFDLEAEGHQVDLAALERIHR
HKTGALIRAAVRLGALASGETGRAALPHLDRYANAIGLAFQVQDDILDVVGDSATTGKRQ
GADQQLGKSTYPSLLGLDNARKKAQELYQESLASLDDLVTSSPIPLNIAPLQALANFIVE
RDK
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatttcagcacgcaactaagtgcacactaccaacgcactaatcgtatgttgggg
catttcatcgccaccctcccctttcagagtagtccactggttaatgcaatggagtatggc
tcactcttagggggcaaacgcctgcgcccatttctggtttatactactggtgaactgttt
ggcatgccgttagagagtctggatgcccctgcagcagcagtagaatgcatccatgcttac
tcactgattcatgacgatctgcctgcgatggacgacgacgatttgcgccgcggacagccg
acctgtcacatcaaatttggcgaagccaatgccattctggcgggagatgcactgcaaacg
ctggcgttctccattctggccgacgcgccgatgccgcaggtctctgaccgcgatcggctg
gcgatgatctcagaattggctcaggccagtggtgttgcaggcatgtgcggcgggcaggct
ttcgatctggaagcggaaggtcatcaggtcgatctggccgcgttagagcgaattcaccgc
cacaaaactggcgccttgattcgcgccgctgtccggctaggcgcacttgcctctggtgaa
acaggacgcgcagccttgccccatctggatcgctacgctaacgcgattgggctcgctttt
caggttcaggacgatattctcgatgttgttggcgacagcgcgacaacaggcaaacgtcag
ggtgcagaccagcagttaggtaaaagcacctatcccagccttctggggttagataacgca
cgaaaaaaagcacaggagctttatcaggaatcactggcatcgctggacgatctcgtcaca
tccagcccgattcctctgaatatagccccactacaagcgctggcgaatttcatcgttgaa
cgcgataagtaa
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