Entry |
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Name |
(GenBank) DNA gyrase, A subunit
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KO |
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Organism |
pct Pectobacterium carotovorum subsp. carotovorum PC1
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Brite |
KEGG Orthology (KO) [BR:pct00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:pct03032]
PC1_1105
03400 DNA repair and recombination proteins [BR:pct03400]
PC1_1105
Enzymes [BR:pct01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PC1_1105
DNA replication proteins [BR:pct03032]
Prokaryotic type
DNA Topoisomerases
PC1_1105
DNA repair and recombination proteins [BR:pct03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PC1_1105
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
1289368..1292007
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AA seq |
879 aa
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYETIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEIRMSKIAHELLADLEKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLTEVVNGCLAYIDDENISLEGLMEHIKGPDFPTAAIINGRRGIEEAYRTGRGKI
YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRIEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNNLYSQTQLQTSFGINMVALHQGQPKIMPLKDILVAFVRHRRE
VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRRAPSPAEAKASLIAQAWELGSV
AAMLERAGDDAARPEWLEPEFGIRDGRYYLTEQQAQAILDLRLQKLTGMEHEKLLDEYKA
LLAEIAELLYILNSPERLMEVIREELEAIKTQYSDERRTEITANSADINIEDLINQEDVV
VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEADERITAILPVREYEEGRHIFMATASGTVKKTSL
TEFSRPRSAGIIAVNLNEGDELIGVDLTDGSDEAMLFSAEGKVVRFSEQAVRSMGRTATG
VRGINLQGEDRVVSLIIPRGEGDILTVTQNGFGKRTAVNEYPTKSRATKGVISIKVSERN
GKVVGAVQVDAADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAEDENVVGLQRVA
EPVEDEELDGVVKVEGEIAEDDDAIDDIDGDDDIAEDDE |
NT seq |
2640 nt +upstreamnt +downstreamnt
atgagcgaccttgccagagaaatcacaccggtcaacattgaagaagagctgaaaagctcg
tatctggattatgcgatgtccgttattgtcggacgtgcattaccagatgttcgtgatgga
cttaaaccggtacaccgccgcgtactgtatgcgatgagcgtactgggcaacgactggaac
aaaccgtataaaaaatccgcccgtgtcgtcggggatgtcatcggtaaataccacccgcac
ggcgactcagccgtttatgaaaccatcgtgcgtatggcgcagcctttctcactgcgctac
atgctggttgatggtcagggtaacttcggttcgattgacggcgactccgcggcggcgatg
cgttataccgaaattcgcatgtcgaaaattgctcatgaactgctggccgatctcgaaaaa
gagacggtcgattttgtgccgaactatgacggcaccgagcagattcctgacgtcatgcca
acgcgtattcccaacctgctggttaacggttcttccggtatcgccgtcgggatggcaaca
aacattccaccgcacaacctgacggaagtcgtgaacggctgtctggcgtatatcgacgat
gaaaacatcagccttgaaggattgatggaacacatcaaaggcccggacttcccgacagcg
gcgatcatcaatggccgacgcggtattgaagaagcctatcgcaccgggcgcggtaaaatt
tacatccgtgcgcgcgccgaagtggaagccgacgcgaaaaccggacgtgaaaccatcatc
gtgcatgaaattccgtatcaggtgaacaaagcgcgcctgatcgagaaaattgccgagctg
gttaaagacaagcgtatcgaaggcatcagcgcactgcgtgacgaatccgataaagacggt
atgcgtatcgtcatcgaaattaagcgtgacgccgtgggtgaagtggtcctgaataatctg
tattcccagacgcagctccagacctcattcggcatcaacatggtcgctctgcatcagggc
cagccgaagattatgccgctgaaggacattctggttgcgtttgtgcgccaccgccgcgaa
gtggtgacgcgtcgtaccatttttgaactgcgtaaagcccgtgaccgcgcccatatcctg
gaaggtctggcgattgcgctggcgaacatcgatccgattatcgaactgattcgccgtgct
ccatcacctgctgaagcgaaagcctcgctgatcgcacaagcatgggaactgggcagcgtg
gcagcgatgctggaacgtgcgggcgatgatgccgcgcgtccagaatggctggagccggag
ttcggcatccgtgacggtcgctactacctgacagaacagcaggcgcaggcgattctggat
ctgcgtttgcagaaactgactggcatggagcacgaaaagctgctggatgaatataaagca
ctgctggcggaaatcgccgagctgctttatatcctcaacagccctgagcgcctgatggaa
gttatccgcgaagagctggaagcgattaaaacccagtacagcgatgagcgtcgtacggaa
atcacggcgaacagcgccgacatcaacatcgaagatctgattaatcaggaagatgttgtc
gttacgctgtctcatcagggttatgtgaagtatcagccgctgagcgattacgaagcacag
cgccgtgggggcaaaggtaaatctgccgcgcgtataaaagaagaagactttatcgatcgt
ctactggtggcaaacacccacgacacgattctgtgcttctccagccgtggtcgtctgtac
tggatgaaggtgtaccaactgccggaagccagccgtggcgcgcgcggtcgcccgattgtc
aacctgctgccgcttgaagcggatgagcgtatcaccgcgattctgccggtacgtgaatac
gaagaaggccgccacatcttcatggcaactgcgagcggtactgtgaagaaaacgtcgctg
acggaattcagccgtccgcgcagcgcggggatcatcgcggttaacctgaatgaaggcgat
gagctgattggcgtcgacctgaccgatggcagcgacgaagcgatgctgttctctgcggaa
ggtaaagtggttcgcttctccgaacaggcggtgcgctctatgggccgcacggcaacgggt
gttcgtggtatcaatctgcaaggtgaagatcgcgttgtttcgctgatcattcctcgtggc
gaaggcgatatcctgaccgttacgcaaaatggctttggtaagcgtactgccgtgaacgag
tacccaaccaagtcgcgtgcgacgaaaggggttatctctatcaaggtcagcgaacgtaac
ggtaaagtggttggcgcggttcaggttgatgccgcagaccagatcatgatgatcaccgat
gcgggaacgctggtgcgtacgcgcgtgtctgaagtcagcatcgttggccgtaacacgcag
ggcgtgacgctgattcgtacggcggaagacgaaaatgttgttggcctgcagcgtgtagcc
gagccggtagaagatgaagagctggatggcgtagtaaaagttgaaggcgagatcgccgaa
gacgatgatgctatcgacgacattgatggcgatgatgatattgcagaagatgacgaataa |